Alligator mississippiensis (American alligator): 102562543
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Entry
102562543 CDS
T03087
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj00100
Steroid biosynthesis
amj01100
Metabolic pathways
Module
amj_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102562543
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
amj01006
]
102562543
Enzymes [BR:
amj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102562543
Prenyltransferases [BR:
amj01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102562543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
102562543
NCBI-ProteinID:
XP_019341063
LinkDB
All DBs
Position
Un
AA seq
268 aa
AA seq
DB search
MGLGMAEFLEKRVDSLQDWNKYCQYAIGLFVIGYSRLFSASKLEDPIVGQDTELANSIGF
FLEKTNIIRDYLEDQLEGREFWPTEVWSRYVKKVSDFAKPENADLAVQCMNELIINALQH
IPDALKYLSRLKSQSVFNYCAIPQVMAIATLAACYNNKEVFRGIVKIRKEQAVTLMRDAT
NMQAVRAIMSQYLEEIYQKIPSMDPSSNKTKEIITSLQKMILRHGTMVSHNGYSSIFLKG
AVLLAVLGWQYLSAMSKVSKECTQAREN
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgggactggggatggcggagttcttggaaaagagggtcgattccctgcaggactggaac
aagtattgccagtatgccattggactctttgtgattggttattcccgtctcttctctgca
tcgaagcttgaagacccaatcgtaggacaggacacagagcttgcaaattccatcgggttc
ttcctggagaaaaccaacatcattcgtgattacctggaggaccagctggagggaagggaa
ttctggcccacagaggtctggagcaggtatgtcaagaaggtctcggattttgccaaacca
gagaatgctgacctggctgttcagtgtatgaatgagttgatcataaacgctctccaacac
atccctgatgccctcaagtacttgtccagactcaaatcccaaagtgtcttcaactactgt
gctattccacaagtgatggccatagccacgctggctgcttgttacaacaacaaagaagta
tttaggggtatagtgaagattcggaaggaacaagctgtcactctgatgagggatgccacc
aacatgcaggctgtcagagctataatgtcccagtatttggaagagatttatcagaaaatc
ccaagcatggacccttcttctaacaagaccaaggagatcattacctctcttcagaaaatg
attctgcgccatggcacaatggtgtcccataatggttactctagcatcttcctgaaaggt
gccgtgctgttggcagtgctgggctggcagtatctgagtgcgatgtcaaaggtgtcaaag
gaatgcacccaggcccgagagaactga
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