Alligator mississippiensis (American alligator): 102562661
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Entry
102562661 CDS
T03087
Symbol
PEX1
Name
(RefSeq) peroxisomal biogenesis factor 1
KO
K13338
peroxin-1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102562661 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102562661 (PEX1)
Membrane trafficking [BR:
amj04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
102562661 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
DUF815
AAA_22
AAA_5
RuvB_N
NACHT
RNA_helicase
ABC_tran
AAA_18
Sigma54_activat
AAA_28
AAA_33
TIP49
AAA_7
AAA_24
IstB_IS21
AAA_2
Bac_DnaA
Zeta_toxin
AAA_29
Sigma54_activ_2
ATPase
Vps4_C
NTPase_1
APS_kinase
Hpr_kinase_C
ATPase_2
Molydop_binding
DUF87
Motif
Other DBs
NCBI-GeneID:
102562661
NCBI-ProteinID:
XP_006270205
UniProt:
A0A151MQ40
LinkDB
All DBs
Position
Un
AA seq
1279 aa
AA seq
DB search
MWGSGGPGGAAVTVAVCGSRDCFLHLPAALAARLRLQQGQAVKVSWGPQPVFLSWMEIRH
RSYHDGSIAEINRQLAEKLGITHGDQVFLEPCSQVLSCQQVEVEPLSADDWEILELHASS
LERHLLDQIRIVFPKAVFPVWVEQHTHIYIQISTLKPAAPYGRLEPHTKLLVCSKMRRDE
ENITNLSSSGSDILPEIFIKSKMDQGEKITEPLAKQSSLNPGVLEQSTSDTKVASIWGLI
RNVFSPTLEHKQETSSGSLEISTLKEKLLNLIHMDAIFRVCQSQPPSKQNTSAFQKHNAV
HVFPWNLEYIELETNFKASYGTITALLSPRQRCQEAKQNLPVEKQKQMTSPQHRNPPSSS
NSQESNEISVVPIIWTGFEDLKDPIKYNSNVEAMHVGRVWIPDGLRKKLHIEMHASVRIK
SLESFPTIPASLRLQPTQNLHKDVHEDDIKSAFKSWLQDYTGDNFPWMITGSDCIQLEVK
ERMEEFVLSVLQPSVTEENKSENIFILSPSLLQKTNIQVLLNPVTTKAAYDRTHCMHDTD
KILHFHKLCSLGGVDKLGTSSFEHISHSILGRPLSQKLACFVVGLRNGGVLLTGAKGTGK
STLAKAICKEAFDRLDAHVEVIDCKDLRGRRLENIRKKVEEAFLEAAWRQPSILLMDDLD
HIVGVPSAPEHENSPEAVQSNRLAHVLKDVIKEVISMGSLIALIVTSQSEHSLHPSLVSA
QGIRVFQCFKHIQPPNQEQRCEILCSIIENKLSSTINKFCDLDLQHIAKETEGFVARDFT
LLVDRAIHACVSNRRACKKEELNLSTSHFQKALKGFTPSSLRNVNLHKPKDIGWDRIGGL
KDVRQILMDTIQLPAKYPELFAKLPIRQRTGVLLYGAPGTGKTLLAHIVARESRMNFISI
KGPELLSKYIGASEQAVRELFIRAQAAKPCIVFFDEFDSIAPRRGHDNTGVTDRVVNQLL
TQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCIYCPPPDQTSRYEILKALSHSLP
LANDVDLQYLASKTEYFTGADLEALLYNAQLEAVHSSLGSCLPQDFGSSSDSDFSLSSMV
FLNHSSGSEDSTGEGEGGLEHSLISLEMSELLPEDSGRSNMYRLYFGSSYESELGNGTPS
ELSSLCLSGPNSATHDLSGMSLRDVVSSQPSVLRTASQEGYQELNQEQMEHLRTEISSIK
ANYQSKNAEEITPSQSVQNKSTLIITQSQLMTALASTRPSISQDDQKKFLEIYNNFQNPK
KRKGQSAATFRPGQKVTLA
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcggcggccccggcggcgcagcggtgaccgtcgccgtgtgcggcagccgg
gactgcttcctgcacctgcccgcggcgttggccgcccgcctccgcctgcagcagggccaa
gctgtgaaagtctcctggggtccccagcccgtatttttgagttggatggaaatcagacat
cgaagttaccatgatggaagtattgctgaaattaacagacagctagcagagaaacttggt
attacacatggggatcaggtattccttgaaccctgttcccaagtcctgtcctgtcagcaa
gtagaagtggagcctctctctgcagatgattgggaaatattggagctgcatgcttcatct
cttgaaaggcatcttcttgaccagattcggatagtatttccaaaagctgtctttccagtg
tgggttgagcaacacacccatatttacatccaaatcagtacgctaaagccagctgctccc
tatgggagattagaacctcacacaaagctgcttgtatgttcaaaaatgcgccgagatgaa
gaaaacatcaccaatttgtcttcctcaggaagtgacattttaccagaaatatttatcaaa
agtaaaatggaccaaggagaaaaaataactgaacctcttgccaaacaatctagtttaaat
ccaggagtccttgaacaaagtacatctgatacaaaagtggcaagtatatggggcttaata
aggaacgttttctctccgactttggaacacaagcaagagacttcctctggtagtcttgag
ataagcaccttaaaagaaaagctattgaacttaatccatatggatgccattttcagagta
tgtcagtctcaacctcccagcaaacagaacacatcagcatttcaaaaacacaatgctgtt
catgtttttccatggaatctagagtatattgagttagagactaattttaaagcatcttac
gggacgattactgcacttctgtcccccagacaaaggtgtcaagaagcaaagcagaatcta
ccagtggagaagcaaaagcagatgaccagcccacaacacagaaacccacctagttctagt
aacagtcaagaatccaatgagatttctgttgttccgataatatggactggttttgaagac
ctaaaggatcccataaaatataacagcaatgtggaagccatgcatgttggaagagtttgg
attccagatggcctgagaaagaaactgcatatagaaatgcatgcatctgtcagaattaag
tcactggagtcattccctacaattccagcatctcttagattgcagcccacacagaaccta
cataaagatgtacatgaagatgacataaaatcagcttttaaatcctggttgcaggattac
actggtgacaattttccctggatgataacaggttcagactgcatacagctagaggttaaa
gaaagaatggaggagtttgtccttagtgtacttcagccttctgtcactgaagaaaataaa
tcagaaaatatttttatattgagtcccagtttgctgcagaagacaaatatacaagttctg
ttaaatcctgtgactacaaaagctgcctatgacaggacccactgtatgcatgatacagac
aagatccttcatttccacaaactatgcagcttaggaggagtggataaattaggaacatcc
tcctttgagcatatcagtcacagcatcttaggacgccctttgtctcaaaagctagcttgc
tttgttgtgggactgcgcaatggaggtgtcctgctcacaggagcaaagggaactggaaag
tcaacattagcgaaggccatctgcaaagaagcatttgatagactggatgctcatgtggaa
gtgattgactgtaaagatttaagaggaagaagattagaaaatatacggaaaaaagtggag
gaagcttttttagaggcagcatggaggcagccgtccattcttttaatggatgatcttgat
cacattgttggtgtcccttctgctccagaacatgagaacagccctgaagcagttcaaagc
aatagacttgcacatgttttgaaagatgtgataaaagaagtcatttcaatgggcagtttg
attgcattaattgtcacaagccagtcagaacattccctgcatccttctcttgtttctgct
caaggaattcgtgtgtttcagtgctttaaacatatccagcctccaaatcaggagcagaga
tgtgaaatattgtgttccataatagaaaataaactgagctccactataaacaagttctgt
gatcttgatctgcagcatattgcaaaggaaacagaaggatttgtagctagagattttaca
ttgcttgtggatcgtgccatacatgcatgtgtttctaacaggagagcatgcaaaaaagaa
gaactgaatctgtcaacttcacactttcaaaaagctttaaaaggttttacaccatcatct
ctgagaaatgttaacttacacaaacctaaagacataggttgggacaggattggtggctta
aaggatgtccggcaaattctcatggatactatccagttaccagcaaagtatccagaactc
tttgcaaaactgcccatacgacagaggacaggagttttgttatatggagctcctggaaca
ggaaaaaccctcttggctcacatagttgcccgagagagtagaatgaattttatcagcatc
aagggaccagagctacttagcaaatatattggagcaagtgaacaagcagttcgagagctc
tttatcagggcacaggcagctaagccttgcattgttttctttgatgagtttgattctatt
gctcctcgccgaggtcatgataatactggagtaacagaccgggtggttaaccagctgttg
actcagctagatggagtggaaggcttacaaggggtttatgtgttggctgctactagtcgc
cctgatttgattgaccctgctctgttaagaccaggtagactggataaatgcatatactgt
ccacctcctgatcagacttctcgttatgaaatcttaaaggcccttagtcattctctgcct
ttggcaaatgatgtggacttacaatatttggcatcaaaaacggagtatttcacaggagca
gacttggaagctttattgtacaatgctcaattagaggcagtacattctagtttgggttca
tgcttaccacaagattttggttccagttctgacagtgacttcagtctctcttctatggtt
ttcttaaaccacagcagtggttcagaagattcaacaggggagggagaaggagggctagaa
cattctctaatttccttggagatgtctgagttgcttcctgaagattcaggaagatccaac
atgtatcgtctttattttggtagttcctatgaatcagagctgggaaatggaactccttca
gaactgagctccctgtgtttgtctggaccaaattccgcaacccatgatttaagtggcatg
agtctgagagatgtagtatcatcacaaccctcagtgctgagaacagcctcacaggaaggt
taccaggaacttaatcaagagcaaatggaacacctccggactgaaatcagttctatcaag
gccaactaccagagcaagaatgcagaggaaattacccccagtcagtcagtgcaaaacaag
agtactttaatcattactcaatcccaactgatgactgcacttgcaagtacaagaccatcg
attagtcaagatgatcagaaaaaatttcttgaaatctataataattttcaaaatcccaag
aagaggaaaggacagagtgcagcaacattcagaccaggacaaaaagtgactctagcataa
DBGET
integrated database retrieval system
