Alligator mississippiensis (American alligator): 102562758
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Entry
102562758 CDS
T03087
Symbol
COL23A1
Name
(RefSeq) collagen type XXIII alpha 1 chain
KO
K24355
collagen type XXIII alpha
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
amj00536
]
102562758 (COL23A1)
Glycosaminoglycan binding proteins [BR:
amj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102562758 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102562758
NCBI-ProteinID:
XP_019334048
LinkDB
All DBs
Position
Un
AA seq
440 aa
AA seq
DB search
MGEGLAKLRTAREASSDCVCPPGPPGRRGKAGRRGEPGPAGQSGRDGYPGPLGLDGKPGP
PGPKGEKGEPGNFGPRGDQGRDGAAGPPGPPGPPGARGPPGDTGKDGPRGPQGPPGLKGE
PGEVGVMGARGPPGLKGEPGTPGEKGDDGARGEPGLQGPKGEKGNMGAMGENGLDGSPGS
KGESGEKGGLGPIGPRGPPGLKGEQGDTVVIDYDGRILDAFKGPPGPPGPPGPQGAPGPK
GELGLPGPPGVDGEKGPKGSKGDAGTPGAMGQKGEIGEMGLSGPPGIDGPKGEQGETGSP
CLQNNHIIPEPGPPGLPGPMGPPGIQGPKGLDGAKGEKGDSGEKGANGDVGPPGLPGSPG
LIGLPGTKGEKGKPGEPGLDGFPGLKGEKGEKSERGEKGERGIPGRKGAKGQKGEPGPPG
LDQPCPVGPDGLPVPGCWHK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaggactagccaagttacggacagcgagagaagcttcgtctgactgcgtatgc
ccaccaggccctccaggacggcggggaaaggctgggagacgaggagaacctggacctgca
gggcagtctggacgagatggttatccggggcctcttggtctggatggcaagcctggacct
ccgggaccaaaaggggaaaagggtgaaccgggaaactttggcccgaggggtgatcaaggt
cgagatggagctgccggcccacctggtccccccgggccaccaggtgcaagagggccccct
ggagatacaggaaaagatggccccaggggaccacaaggccctcccggcttgaaaggagag
ccaggagaagtcggtgtgatgggcgcaaggggacctccaggactaaaaggtgaacctggg
actccaggggaaaagggtgacgacggagctcgtggagagcctgggcttcaaggacctaag
ggggaaaaaggaaacatgggtgccatgggggagaatgggctagatggatcgccgggctcg
aagggtgaatctggtgagaaaggaggactgggacccattggaccaaggggtccacctggt
ctgaagggtgaacagggagacactgtcgtgattgactatgatggcagaatcctggatgca
ttcaagggcccacctggtcccccaggacctcccggacctcaaggagccccaggaccgaag
ggagagcttggattgcctgggccacctggagttgacggagaaaaaggtcctaaaggatct
aaaggagatgcaggaacccctggggcaatgggacaaaaaggagaaataggagaaatgggc
ctttctggtccaccgggaattgatggaccaaaaggagaacaaggagaaactggatcccca
tgcttgcagaataatcacatcatacctgagccaggacctcctggattgccgggccctatg
ggtcctccaggaatccaggggcctaagggtttagatggcgcaaagggagaaaagggagac
agtggtgagaaaggagcaaatggtgatgttgggccacctggtcttcccggttcccctgga
cttattggtttaccaggtaccaaaggagagaaggggaagccaggagagccagggttagat
ggtttcccaggtctaaaaggagaaaaaggagaaaaaagtgaaaggggagagaagggagaa
agaggaataccagggagaaagggagccaaggggcaaaaaggagagccaggccctcctgga
ctggatcagccgtgcccagtgggaccagatggattgccagtaccaggatgttggcacaag
tga
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