Alligator mississippiensis (American alligator): 102562822
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Entry
102562822 CDS
T03087
Symbol
NPHP3
Name
(RefSeq) nephrocystin 3
KO
K19360
nephrocystin-3
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102562822 (NPHP3)
Cilium and associated proteins [BR:
amj03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102562822 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
NPHP3_hel
TPR_12
TPR_10
NPHP3
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
NPHP3_N
NACHT
TPR_6
TPR_11
AAA_16
AAA_22
KAP_NTPase
DUF2225
AAA_19
AAA_14
T2SSE
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
102562822
NCBI-ProteinID:
XP_014458003
UniProt:
A0A151P2Q1
LinkDB
All DBs
Position
Un
AA seq
1316 aa
AA seq
DB search
MGTASSLVSPAGGAGEVIEDTYGGGGGEACEIPVEVKPKARLLRSSLRRVGASRPGGLIG
ASFKSTASVQELECAAEYERLKKEYEIFRVSKSNEVASMVKKEAKLDRENKRLRAELQAL
QKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKREL
EAKLQRLQAQGIQVFDPEESDSDDNCTEITATGAQSEYWTGGALGSEPSMGSMMQLQQSF
RGPEFAHSSIDVEGPFANINRDDWDAAVASLLQVTPLFSHSLWSNTVRCYIISTDETRPE
VDIFIRNYSPKLQRICETKGYFFQVVHFPSENQSQFKDVRKWEIEKSFLVILLMKSTLPS
CLLDDCEEAFLKNPEGKPRLIYRRIEEGTVGSDSVQQLIEQVCYVNKAKIVDHMGEVDEG
AYEIANCVEKIIKQDILGYENTELEGKDLGNKEESTAPEEDDFGDVLWDAHDEQEQMEAF
QQASSSTCELGFEKYYERLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHSPNT
LILYHFVGRPMSTSSESALIIKRLTLKLMQHSWLVSPLTLDPSKLLEEFPRWLEKLSARH
QGSIIIIIDSVDQIQQAEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLNS
KDVKSLINAECSSANIKLTKEQEKKLERHCRSATTCNALYVTLLGKMIACAGSEGNIDET
LQQCFQCQDTVSLYRLVLRSVQESLPNDMDKDLMREVLCLITVSHNGVSESEVMELYPEL
SSALLASLVHSLHKMCLLTYGCGLLKFRHLQAWEMVRLEYMEEGQNISSYRQKLIDYFAM
QLSQDRVTWRSADELPWLFQLQGDKQKLHKCLLNLFVSQNLYKRGHFAELLSYWQLVGKD
KSSMAAEYFNSLKEYEKSCEGEKSMLCLADLYETLGRFLKDLGLLSQAVAPLQRSLEIRE
TALDPDHPRVAQSLHQLAGVYMQWKKFGNAEPLYKQALEISENAYGAEHPRVARELDALA
TLYQKQNKYEQAEQLRKKSFKIRQKAARRKGSSCGFALLRQRALQLEELTLGKDTPDNAR
TLNELGVLYYLQNNLETAELFLKRSLEMRERVLGPDHPDCAQSLNNLAALYNEKKHYDKA
EELYERALDIRRRALAPDHPSLAYTVKHLAVLYKKMGKLDKAVPLYELTVEIRQKSFGPK
HPSVATALVNLAVLYCQMKKRTEALPLYERALKIYEDSFGRMHPRVGETLKNLAVLSYEG
GDFEKAAELYKRAMEIKEAETSLIGGKTPSRHSSSGDAFSLKSALSPNVFLEHGQG
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcctcatccctggtgagcccagcgggtggcgctggggaggtgatcgaggac
acgtacggtggtggcggcggcgaggcctgtgagatcccagtggaggtgaagcccaaagcc
cgcctgctgcgcagctctttgcgccgggtgggcgcatcacggcccgggggcctcatcggg
gccagcttcaaatccacggcctcggtgcaggagctggagtgcgcggccgagtatgagcgc
ctgaagaaagagtacgagatcttccgcgtcagcaagagcaatgaggtggcctccatggtg
aagaaggaagccaagctggacagggagaacaagcggcttcgggcagagctccaggctctt
cagaaaacttaccaaaaaatacttagagagaaagaaagtgctttagaagccaaataccaa
gccatggaaagagctgctacttttgaacatgaccgtgacaaagtcaagagacagttcaag
atttttagagaaactaaggaaaatgaaattcaggatttgctgagagctaaacgagaactg
gaagccaagcttcagagactgcaagcccaagggatccaagtgtttgatcctgaagagtct
gattcagatgacaattgcacagaaattacagctactggggcccaatctgaatactggact
ggtggagctttgggaagtgagccatctatgggcagcatgatgcaacttcagcagtctttc
agagggcctgagtttgctcacagttctatagatgtggaaggaccatttgcaaacataaac
agagatgactgggatgctgctgttgccagtttattgcaggtcacaccactgttttcccac
tctctctggagtaacacagtaaggtgttatatcattagtacagatgagacccgaccagag
gtggatatcttcattaggaactactcaccaaaacttcaaagaatctgtgaaacaaagggg
tacttctttcaagtggttcattttccatcagaaaatcagagtcaattcaaggatgtgaga
aaatgggaaattgaaaaaagtttcttagtcattttgctcatgaagtcaactttgccaagc
tgtttgctggacgactgtgaagaagccttcttgaaaaatcctgaaggaaaaccccgtttg
atttaccgcagaatagaagaaggcacagtcggctcggattctgtgcagcagttaatcgag
caagtttgttacgtgaacaaagcaaagatcgttgatcacatgggagaagtagacgaagga
gcgtatgaaatcgctaactgtgtagaaaagatcattaagcaggatatactgggctatgaa
aacacagaactggaagggaaggatttggggaataaagaggagtccactgctcctgaagaa
gatgattttggtgatgtactttgggatgcacatgatgaacaagaacagatggaagctttc
cagcaggcttctagttcaacttgtgagcttggatttgagaaatattatgaacgtctgaat
gatctagtggcagcaccagcacctattccacctctccttgtgtcaggaggaccaggctct
gggaaatctctccttctatcaaaatggattcagttacagcagaagcattcgccaaacact
ctaattctttatcactttgttgggaggcccatgtctaccagttcagaatcggcactgata
attaaacggcttactctaaagctgatgcagcattcttggttagtatcacctttaacattg
gatccctcaaaactcttggaagagtttcctcgttggctggaaaaactttctgctcgtcac
caaggcagtattatcataattattgattctgttgatcagatacagcaagctgaaaagcat
atgaaatggctgatagatcccctaccagtgaacgtcagagtaattgtatctgtgaacgta
gaaacttgtccacaggcatggaggttgtggccaactcttcatcttgatccattgaattct
aaagatgtgaaatctcttattaatgcagagtgcagctctgcaaacattaaattaactaaa
gagcaggagaagaagcttgagagacattgtcgttctgctacaacttgcaatgctttgtat
gtcacacttttgggtaaaatgattgcttgtgctggaagtgaaggaaatattgatgaaacc
cttcaacagtgtttccagtgtcaagatacagtgtccctgtataggcttgttctgcgatca
gttcaggagtctctgccaaatgatatggacaaagaccttatgagagaggttctctgtctc
atcactgtcagccacaatggagtgagcgaatcagaagtgatggaactttatcctgaactg
tcctctgcattgctagcctccttagttcacagtctgcacaagatgtgcttgctgacatat
ggttgtggtttgctaaagtttcggcacctccaggcttgggaaatggtgagattagaatac
atggaagaaggtcaaaatatttcttcatatagacaaaagctgatagactactttgcaatg
cagctaagccaagaccgagtgacttggagaagtgcagatgaacttccctggcttttccaa
cttcaaggtgacaagcagaagctacacaaatgtttgctgaatctctttgtatcccaaaac
ctttacaaaagggggcattttgcagaattgctgagttactggcaacttgttgggaaagat
aagagctccatggcagcagaatattttaactctctaaaggaatatgaaaaaagctgtgag
ggagagaaaagtatgctctgtctggctgatctttatgagactctaggccggtttcttaag
gacctaggccttctcagtcaggctgttgcaccccttcagcgttctctggagatccgagag
actgcgctggatccagatcacccaagagtagcccagtcccttcatcagttagcaggagtt
tacatgcagtggaagaagtttggaaatgctgagccattatataaacaggctctggaaatc
tctgaaaatgcttatggagctgaacaccccagagttgctcgtgaacttgatgcacttgca
acgctgtaccaaaaacaaaacaaatatgagcaagctgaacagctgaggaagaaatccttt
aaaatacgacaaaaagcagcaaggcggaaaggcagttcgtgtggatttgctcttcttcgt
caacgagcccttcagttggaagagcttaccttaggcaaagacacaccggataatgcacga
accctcaacgagctcggagttctctactatctgcagaataacctggagacagcagaactt
tttctgaagcgctccctggagatgagagaacgggtgttaggaccagaccacccagactgt
gcacaatccttaaacaatctggcagctctgtacaatgagaagaaacactatgataaagct
gaggaactctatgaaagggctttagacattaggaggagagcactagcccctgatcatccc
tccctggcttacactgtgaaacaccttgcggtactctataaaaagatgggaaaacttgac
aaggctgtacctctatacgagttgactgttgaaatccggcagaagtcatttggtccaaag
caccctagtgtagctactgccttggtaaacctagctgtcctttattgtcagatgaaaaag
cgaactgaagccttacctctgtatgagcgtgcgttaaagatttatgaagacagcttcggt
cgtatgcatcctcgtgtgggagaaacgctaaaaaacttagctgtgctaagttatgaaggt
ggagattttgagaaagcagctgaactgtacaagagagccatggaaataaaagaagcagag
acttcgttgataggaggaaaaactccatcccgacactcatccagtggagacgcattcagt
ttaaaaagtgcattatcaccaaatgttttcctagaacacggacaggggtga
DBGET
integrated database retrieval system
