Alligator mississippiensis (American alligator): 102562823
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Entry
102562823 CDS
T03087
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102562823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102562823
03036 Chromosome and associated proteins [BR:
amj03036
]
102562823
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102562823
Coactivators
SAGA/TFTC/STAGA complex
102562823
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102562823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
DUF1955
Motif
Other DBs
NCBI-GeneID:
102562823
NCBI-ProteinID:
XP_019348449
UniProt:
A0A151N785
LinkDB
All DBs
Position
Un
AA seq
750 aa
AA seq
DB search
MASTTVTLNAISKPVVNVIGPPGPAVGIAKPGAAVPVVSAVPQSLSPRPAVGTTQRIVAP
QLIVRPPQQTTIQLPPGFTIPPGMVLVRTEAGQLVMVPQQALAQAQVQAQVQTQGQGPTS
ISPRLSVPTSGPVFRLSTAQQPTSVATSTVRLGLPVQAKVVQSTATPVSVTSAATLPGGS
TLSHTTVTVATTSAQTLFKTTVATGTSASQQPTVISGGQTQTPTQPQGQPRLPLPPHTTA
QVPAQPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQ
DLLDAKIDPEEFTGRLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQPL
QQTKLSQIIPQSASGSISSVVATQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQ
IIQSTSAQTVKRNPACQTTQIRMPVVITQPIRPQGTVGKAPTIQANKSPGGVGVQVSANQ
KNKLNDPGGGSFRDDDDINDVASMAGVNLNEENARIMATNSDLVGTQIQSCKDEPFLAAI
PLHKRILEMAKKLGITDVPAEVVTFISHATQNRLRTVIEKVTMITQHRMESHKDDEWYEQ
ATDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQEL
AQMRQRDANLTALAAIGPRKKRKLDSPGLLTTGGEVLGMSSGGQAGFGTPSSRQYARQKI
TRVNLRDFIFYMEQERETSHSLLLYRALLK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaccacggtcaccctcaacgcgatatctaagcccgtggtgaatgttataggg
ccacctggtcccgctgttggcatagccaagccaggtgctgctgtacctgtcgtctctgcg
gtcccccagtcgctgtccccccggcctgcggtgggcactactcaaagaatagtggccccg
caactgatcgttagaccgcctcagcagaccaccatccagttgcctccaggctttactata
ccacctgggatggtgttggtgcgcactgaagctggacagcttgtcatggtaccccagcaa
gctttagctcaggctcaagtgcaagctcaagtacaaacccaggggcaagggcccaccagc
atttcgcccaggctttcagtgcctacaagtggcccagtttttcgtttatcaacagcccag
cagccaacttctgtagccacatctactgtccggctaggactgcctgtgcaagctaaagtt
gttcagtcaactgctacaccagttagtgttacatctgctgcaaccctgccaggaggttct
actctgtcacataccacagtaacagtagctaccacaagtgctcagactttatttaaaact
acagtagcaactggaacctcagcttctcaacaacctacagtaatttcgggagggcaaact
caaaccccaacacaaccccaaggtcagcctcgattaccactcccacctcatacaacagca
caagtaccagcacagccccaggtcatacctagttcccctgtaccagggactacagttgta
tcacaggaaatgcaagagaatgtgaagaaatgcaaaaactttttagccacccttataaaa
cttgcttcccataattcaccttctccagaaacatcccgtaatgtgaaagctctggttcag
gatttgttggatgcaaagatcgatccagaagaatttacaggccgccttcagtcagagctc
aaatcatctcctcaaccatatctggtacctttccttaagaaaagtctacctgcattgaga
caatctttactgaacagtcagcattcagttttgcaaggacagccgtctcagcagccactt
caacaaaccaagctatcacaaattatacctcagtctgcctctggaagcatttcctctgtt
gttgcgacacagacaataggaataaggcaaccaaacaacatttgcacagtctctgtatca
aatacagtgcagcctcctcaggttaaggtggtacagtcaaatcagagttctcaactgcag
attatccagtcaacatctgctcaaactgtgaaacgaaaccctgcctgccagactacccag
attaggatgccagtggtaataactcagcccattagaccacaaggcacagtagggaaggca
ccaacaatacaagccaacaaaagtcctgggggcgttggtgttcaggtctctgcaaatcag
aaaaacaagctgaatgaccctggaggtggttctttcagagatgatgatgacatcaatgat
gttgcctctatggctggagttaacctaaatgaagaaaatgcccgaatcatggcaaccaat
tctgacttggttggaacacagatacagtcttgtaaagatgagccctttcttgcagctatc
cctttacataagcgcatactagaaatggctaaaaaattaggaattacagatgtgccagct
gaggtggttacctttatttcccatgcaacacaaaacagattaagaactgtgatagaaaaa
gtaacaatgataacgcagcaccgaatggagtctcacaaagatgacgaatggtatgagcag
gctacagatgtccgatcacagttaaagttttttgaacagttggagcgtttagaaaagcaa
agaaaagatgaacaagagagggaaatcttgttaaaagctgccaagagtcgctcaaggcaa
gaagacccagagcaagctagactgaaacaaaaagcaaaggagatgcagcaacaagaacta
gcacagatgaggcagagggatgccaacttaactgccttggcagctattggtccacggaag
aaaaggaagctcgattcacctggtttgcttaccacaggaggagaggtcttgggcatgtcc
agtggaggccaggctggttttgggactccttcatccaggcagtatgcacgacaaaaaata
actcgtgtaaacctcagggatttcatcttctacatggaacaggaaagagaaacaagccat
tctctcctgctctacagagctttgcttaaataa
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