Alligator mississippiensis (American alligator): 102562835
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Entry
102562835 CDS
T03087
Symbol
NSMCE2
Name
(RefSeq) NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102562835 (NSMCE2)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102562835 (NSMCE2)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
102562835 (NSMCE2)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
102562835 (NSMCE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
Rtf2
U-box
zf-MIZ
HalX
Baculo_PEP_C
zf-C3HC4_2
ACOX_C_alpha1
zf-C3HC4
EDR1_CTR1_ARMC3_pept
DUF3492
Motif
Other DBs
NCBI-GeneID:
102562835
NCBI-ProteinID:
XP_014466971
LinkDB
All DBs
Position
Un
AA seq
237 aa
AA seq
DB search
MPGGSVISFNAVDSSLSSLKNCQSYINTGMDIASNVAFDLVENLNDIEEVNAMENVMLEY
ATMDRQLNHYMQAIEATVNQIKQDIPEIVPDLKELVKEKFTALESRNSDSDLQRHEKYKH
FKEQLKDMRKQVGLQTDADEAIEQIDEDITVTQSQMKFLCPITQMEMKKPVRNKVCGHAY
EEEAILKIIQRQEQKKKKARCPKIGCVHSDVKRSDLVPDEALKRRIDSQNKQGRSTL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggggttcagtgatctcattcaatgctgtggattcttctctgtcatctttaaaa
aactgccagtcatacataaacaccggcatggatattgctagtaacgttgcttttgacctt
gtggaaaatctcaatgatatagaggaggttaacgctatggaaaatgtgatgttagaatat
gccacaatggacagacaactaaaccattacatgcaagcaattgaagctacagtaaatcag
ataaagcaagacattccagaaattgtaccagatctaaaagagctagtaaaagaaaaattt
actgcattggagagcagaaacagtgactccgacctgcagagacatgaaaaatataaacat
tttaaggagcaacttaaagacatgagaaaacaggttggtcttcaaacagatgctgatgag
gccattgaacaaattgatgaagatattacagtgactcaaagtcagatgaaatttctttgt
cctatcacacagatggaaatgaagaagcctgttcgaaataaagtctgtggccatgcttat
gaagaagaagccatattaaaaattatccaaagacaagaacagaaaaagaaaaaagcacgc
tgccctaagattggctgtgtccattctgatgtaaaaagatcagatcttgtgccagatgaa
gcacttaaaagaaggattgacagtcagaataaacaaggccggtcaacattgtag
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