Alligator mississippiensis (American alligator): 102563184
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Entry
102563184 CDS
T03087
Symbol
BCAN
Name
(RefSeq) brevican
KO
K06795
brevican
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
amj00535
]
102563184 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
amj00536
]
102563184 (BCAN)
04091 Lectins [BR:
amj04091
]
102563184 (BCAN)
Proteoglycans [BR:
amj00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
102563184 (BCAN)
Glycosaminoglycan binding proteins [BR:
amj00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
102563184 (BCAN)
Lectins [BR:
amj04091
]
C-Type lectins
Lecticans
102563184 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
ig
Ig_3
I-set
EGF_2
Motif
Other DBs
NCBI-GeneID:
102563184
NCBI-ProteinID:
XP_019340397
LinkDB
All DBs
Position
Un
AA seq
1111 aa
AA seq
DB search
MADAFLLLLCVFVPLAFPHAFVSGDSTDDLKALKVSISQQPPVQAVLAGNILIPCSITYL
RPLPTSSTAGRRAVLGTPRVKWTFISDGREVEILVARGNRVKVSEDYRFRASLPTFQHQR
TNASLLLRELRPSDSGIYRCDVQHGIDDGHDLLEVKVKGVVFHYREGSQRYAYTFAEAQE
ACARIGARIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIHTPREACYGDMNGFPGVRNY
GVVDPEDTYDVYCYAEELHGEIFLETAPDKFTWQEAKAHCQALGAEIATTGQLYAAWTRG
LDHCSPGWLADGSVRYPIITPRERCGGSVPGVKTIFLFRNQTGFPDAQSRYDVFCFREEP
SSFTEVPENHQASEPRGLQDIVTVTERMEELQLPQAEVDNESRGAIYSVPFFQDAEREKP
SSAPEEASVPVPRHAPLDNSVSSDLGLHLPPATPSPETPFTSKAELGGPISCGALPGSPA
RPGEKGRGGNCTEASQERPRTGEEHGADQGHPGSLSAGETARAPKDDGTLMLDGGLQNPI
HPTEAPTDGSVTAAPTLSPAAVSPSLRDESQRSGLPGPALASPATSQERGEEAAAEGSSL
DITHVPEVSGEADFFPGSKHGEGDTLPEDHPAPASEGPVGGKWDVSEQLTPNTSAGSSQD
LLGLANSTIAASTLLWKASEPGQEEPAWTHATPQQGLVSGLTSTHFPSLRGPLGAPEETE
LSGDASTGTTVSPATLQSMSPSLQEPGEEQPGTVGAPLPGSQPGTTEPKVTTVPAGHSGA
DQGPPSKELSGESDTQAVARETVAVQPPSAASPSATPGRETKGDGPPASPEHGLVPEAAS
GSMLEGMPFTDAPLTTAHPLPILPTERASLGVGANISEDCIPNPCLNGGTCSEEEVGISC
VCLPGYGGHTCETDLQKCGPGWDSFQGSCYKHFSTRRSWEDAELQCRHYGGHLANILTPE
EQDFINNQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSGENCVVIVWH
DGGQWSDVPCNYHLSYTCKMGLVSCSSPPEVTNARMFGKPKQHYEISSIVRYRCLEGFTQ
RHSPIIRCQKEGMWEQPQLACLPSVTQTPED
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgccttcctgctgctgctctgtgtgtttgttcccctggccttcccccatgca
tttgtctctggagacagcacagatgacctcaaggctctcaaggtctccatcagccaacag
ccacccgtgcaggctgtgctagctggcaacatcctgatcccttgcagcatcacgtacctg
cgccccttgcccacctccagtacggcagggcgccgggcggtgctggggaccccccgcgtc
aaatggaccttcatctccgacgggagagaggtggagatcctggtcgcccgaggcaatagg
gtgaaggtgagcgaggactatcgcttccgtgcctccctgcccaccttccagcaccagcgc
accaacgcctctctgctgctccgggagctgcggcccagcgactcggggatctaccgctgt
gacgtgcagcacggcatcgacgatgggcatgacctgctggaggtgaaggtcaaaggggtt
gtcttccactaccgtgagggctcccagcgctatgcctacacctttgccgaagctcaggag
gcctgtgccaggatcggggcccgcattgccacgcctgaacagctctatgccgcctacctg
ggtggttatgagcagtgtgacgccggctggatcgcggaccagaccgtcaggtaccccatc
cataccccgcgggaggcctgttatggagacatgaatggcttccctggggtccgcaactac
ggggtggtggaccccgaagacacatacgacgtgtattgttatgccgaagagctccacgga
gaaatctttttggagacggccccagacaaattcacgtggcaagaggccaaggctcactgt
caggcgctgggagcggagatagcaaccacgggtcagctgtatgcggcctggacccggggg
ctagaccactgcagccccggctggctggccgacggcagcgtccgctaccccatcatcacc
ccgcgggagcggtgcggagggagcgtgccaggagtcaaaaccatcttcctcttccggaat
cagacgggattccccgatgcccagagcagatacgatgtgttctgctttagagaagagccc
agctctttcactgaggttcccgaaaatcaccaagccagtgagcccaggggcctccaggac
attgtcacagtgacagagaggatggaggagctgcagctaccccaagcagaagtggacaat
gagtcaagaggggccatatactccgtccccttttttcaggatgctgagcgggaaaagcca
agcagtgcccctgaagaggcgagcgtgcccgtgccccggcatgccccactagataactcc
gtgtcctcagatctaggactccatctgccaccagccacaccttcccctgagacccccttc
acctccaaggcagagctggggggcccaataagctgtggtgccctgccagggagccctgcc
cggccaggggaaaaggggagaggtggaaattgcacagaggccagtcaagagagacccagg
actggggaggagcacggcgcagaccaggggcacccgggctccttgtcggcaggcgagaca
gcccgtgcccccaaagacgatgggactctgatgctggacggtggcctgcagaaccccatc
caccccaccgaggcacccacggacggctcggtcacagctgcacccacgctcagcccagct
gctgtctccccgtccctgagggatgagagccaacgcagcgggttacctggccctgccctg
gcatctccagcgacctcccaggaacgtggagaggaggctgcagcagaaggcagttccttg
gatatcacccatgtgccagaagtgagcggcgaggcggacttcttccctggctccaagcac
ggagaaggggacactcttccagaggatcacccagcccctgcctcagaggggcctgtgggg
ggaaagtgggatgtctcggagcagctgactccaaacaccagtgctgggagcagccaggac
ttgctggggctggcgaactcgaccatcgctgcttccacgctgctgtggaaggccagtgaa
ccagggcaggaagagcctgcttggacccatgccaccccccaacaaggcttggtctcgggg
ttgaccagcacgcacttccccagcctgcgcggccccctgggtgctcctgaagagaccgag
ctctctggagatgcctccacaggcaccacggtgagcccggccaccttgcagtccatgtcc
cccagcctgcaggagccaggcgaggagcagccgggcactgtgggggctccattgcccggg
tcccagccaggtaccactgagcccaaggtgaccacggtccctgctggacactcaggggcc
gaccaggggccacccagtaaggagctgtcaggggagagcgacacgcaggcagtggcccgg
gagaccgtggcagtgcagcctccatctgcagcatctccttctgctaccccaggcagagaa
accaagggggacggaccccccgccagccctgagcatggcctggtgcctgaagcagcgtcc
ggctccatgctggaggggatgcccttcaccgatgcccctttgaccacagcccatcccttg
cccatcctccccaccgagcgtgccagcctgggcgtgggggcgaacatctcagaggactgc
atccccaacccttgcctgaatggtgggacctgcagcgaggaggaggtgggcatcagttgt
gtctgcctgccgggctatgggggacacacctgtgagacagacctgcagaagtgtggccca
ggctgggacagcttccagggctcctgctacaagcacttctccacccgccggagctgggag
gacgcagagttgcagtgcagacactatggcggccacctggctaacatcctgactcccgag
gagcaggacttcatcaacaatcagtacagggagtatcagtggatcgggctgaacgatcga
acgattgagggcgatttccagtggtcagatgggagtcccttgctctatgagaactggcat
cctgggcagcctgacagctacttcctatccggagagaactgcgtagtcatcgtgtggcat
gatggggggcaatggagtgacgtgccttgcaactaccacctgtcctacacgtgcaaaatg
gggctagtgtcttgcagctccccaccagaggtgaccaatgcccgcatgttcggcaaacca
aagcaacactacgaaatcagctccatcgtgcggtaccggtgcctggagggcttcacccag
cgccactcacccattatccggtgccagaaggaggggatgtgggagcagccccagcttgct
tgcctgccaagtgtgactcaaacccctgaggactga
DBGET
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