Alligator mississippiensis (American alligator): 102563383
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Entry
102563383 CDS
T03087
Symbol
NEDD4
Name
(RefSeq) neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04120
Ubiquitin mediated proteolysis
amj04144
Endocytosis
amj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102563383 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102563383 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
102563383 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102563383 (NEDD4)
04121 Ubiquitin system [BR:
amj04121
]
102563383 (NEDD4)
03029 Mitochondrial biogenesis [BR:
amj03029
]
102563383 (NEDD4)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102563383 (NEDD4)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
102563383 (NEDD4)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
HECT type E3
102563383 (NEDD4)
Mitochondrial biogenesis [BR:
amj03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
102563383 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
102563383
NCBI-ProteinID:
XP_014461574
LinkDB
All DBs
Position
Un
AA seq
1314 aa
AA seq
DB search
MARRLRLHFAARRSNTDPLSETSEDDLDNNIYMHFKRPSQNSASNVIEMKLTPRQAVFPP
VMQEIINQQQSASGSSLQKNNKKSTSLQISLQSRKYSGCLQSGDTVATNEDSSFTGVGNE
GNCSGRNIADYPSNMINTTSHLSSTTMLNGSLGSIAASDNGSFSSAGSDYGSCTSTTSDG
GSHCNSVLSDNSSCALSTGDGIFYNSIVYDNSSYRRTTNKYNSYRKDASQECLCRSNTIF
DQDGLEQMKLSARRKTKVPLRRCSSLVIFPRSPSSTPPMSPTSSGPPPQSVAYQTSHKLV
ISPSDLAQHENQTGNKEFLSTAVNGLRLSKSAFSPGEVREIRPLYLNTSLQAKSQATDSS
EQATCEETSDGFSCISVHLTQKVSTSRDEMVNSCGSPESNLNSSAECPHLKLTHSTSACL
PSKSHSEYRINENELKRPNIQMNKTHHFLQRSMSLEGSCQKVSCYLSSLKYKCPKAGASH
LHIQFRPGNEGKTNGFKKRNGISKREMCNRTLWKPLKTRDDFLGQVDVPLYQLPTENPSM
ERPYTFKDFVLHPRSHKSKVKGHLRLKMTYLPKNNGSEEENTEQAEELEPGWIILDQPDA
ACQLQHQQQEIPPLPPGWEERQDILGRTYYVNHEFRRTQWKRPTAQDSTADADHGSFQLE
AQHAFTHRHQISEDSENLDNRDSPESWEIITEDEATMYSNQSLQMPLSQCNSDVQTQLAE
ELNTRLTTSGSSASGQPAFYTNHSSRRSSLQTYRVEEQPALPVLLPTSSGLPPGWEERQD
EKGRSYYIDHNSRTTTWIKPVVQTTIDTGHLSTVQSTSTGQQPPSSDSSQPETEQGLLPK
GWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIPAHLRRKTSLDPTDLGPLPPGWEERTHTD
GRIFYINHNTKKTQWEDPRLQTAAITGPAVPYSRDYKRKYEFFRKKLKKQSDIPNRFEMK
VHRTTILEDSYRRIIAVKRAEFLKAKLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYG
LFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQ
KPITLHDMESVDSEYYNSLKWILENDPAELDLRFMVDEELFGQTHQHDLKSGGSEIVVTN
KNKRDYIHLVIQWRFVSRVQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVA
DWKLHTKYKNGYSINHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNG
PQLFTIEQWGTPEKLPRAHTCFNRLDLPPYDSFEDLWEKLLLAIENTQGFDGVD
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaaggttaagattgcattttgcagcccgaagaagcaacaccgatccactgtca
gaaacctctgaagatgacttggataataatatttatatgcatttcaaaagaccttcacag
aattctgcatctaatgtcatagaaatgaaactgactcccaggcaagcagtctttccacct
gtaatgcaagaaataattaatcaacagcaaagcgcaagtggttcttcgctgcaaaaaaac
aacaaaaagagcacttcacttcagatttccctgcagtctagaaagtacagtggatgtctt
cagtctggtgatacagtggctactaatgaggattcatcattcactggtgtcggcaatgaa
ggaaactgttctgggagaaatattgctgattatccatctaacatgataaatactaccagc
cacttgagcagcactaccatgttgaatggcagtcttggcagtattgcagccagtgacaat
ggatccttcagtagtgctggcagtgactatggatcatgcacaagtaccacaagtgatgga
ggttcacactgcaacagtgtccttagtgacaatagtagttgcgctctttccacaggtgat
ggtattttttataatagcattgtgtatgataactcttcgtatagaagaactacaaacaaa
tataattcctataggaaagatgcatctcaggaatgtttgtgtcgaagtaatactattttt
gaccaagatggtttggagcaaatgaaattgtcagcaaggaggaaaactaaagttccacta
agacgttgttcatcattggtaattttccctcgaagcccttccagtactccaccaatgtct
ccaacaagctcaggtcctccaccacagagtgtggcatatcagacctcacataaactagtt
atttctccaagtgacctagcacaacatgaaaatcaaactggtaataaggagtttctttca
acagcagtcaatggacttcgactctctaaatctgctttttctcctggtgaggttagagag
attagaccactttacttgaatacttcattacaggccaaaagtcaagccacagatagttct
gagcaggcaacttgtgaagaaacatctgatggcttctcttgtatttcagttcaccttact
caaaaagtatctacatcaagggatgaaatggttaatagttgtggcagtccagaatcaaat
ctgaactctagtgcagagtgccctcatttaaaactgacacatagcacatctgcgtgttta
ccctcaaaaagccattcagaatatcggattaatgaaaacgaactaaaaagacctaatatt
caaatgaacaaaacccaccattttctgcaaagaagcatgtccttagaaggttcttgccag
aaagtttcttgctatttatctagccttaaatacaagtgtcctaaggcaggggcatctcac
ttgcacatacagtttcgacctgggaatgaaggaaaaactaatggctttaaaaaaagaaat
ggaatttccaaaagggaaatgtgtaacaggactttgtggaagcccctcaagaccagagat
gacttcctaggccaagtggatgttcctctttatcagttaccgacagaaaatccaagtatg
gagagaccatacacatttaaggattttgttcttcatccaagaagtcacaaatcaaaagtt
aaaggtcatcttagattaaaaatgacttacttacctaaaaataatggatctgaagaagaa
aatacagaacaggcagaggaattagagcctggctggattatattggaccaaccagatgct
gcttgtcagctgcaacaccagcaacaagaaattcctcctctacctccaggctgggaagaa
aggcaagatatacttggcaggacatattatgtcaaccatgaattcagaaggacacaatgg
aagagaccaactgctcaggacagtacggctgatgcagatcatgggagctttcagttggaa
gcacagcatgcatttactcatcggcatcaaatatcagaagattctgaaaatctagacaac
agggattctcctgagagctgggaaatcataactgaagatgaggcaactatgtatagcaat
cagagtctacaaatgcctctgtcacagtgtaattctgatgtacagactcagcttgcagaa
gaattgaataccagacttactacctccgggagttcagccagtggccaaccagctttttac
actaatcattccagcagaagaagtagtctgcagacatacagggttgaggaacagcctgca
cttcctgtgttattgcctacttcatctggattgcctccaggttgggaagaaagacaagat
gaaaaaggacgttcatattacatagatcacaattccagaactactacctggataaagcct
gttgtgcagactacaatagacacgggccatctatcaactgtccagagtacttctacagga
cagcagccaccatcaagtgattcatcacaacctgaaacagagcaaggattactccctaaa
ggctgggaagtccgacatgcaccaaatgggagaccattctttattgatcacaataccaaa
actactacatgggaagatccaagattgaaaattccagctcatctaaggagaaagacctct
ctagatcccacagatctaggtcccttgccaccaggatgggaagagagaactcatacagat
ggaagaatattctacataaaccacaacacaaagaagacacaatgggaagatccacgacta
cagactgcagcaattactggaccagctgtgccttactccagggattacaaaagaaaatat
gaattcttcagaaaaaagttgaagaagcagagtgatattccaaatagatttgaaatgaaa
gttcatcgcacaacaatccttgaagattcttatagaagaattatagctgtaaaaagagca
gaattccttaaagcaaaactctggatcgagtttgatggtgaaaaaggattagattatgga
ggagtggcaagggaatggttctttcttctctctaaagaaatgtttaatccctattatgga
ttgtttgaatattctgctacggataactatacgctgcagatcaatccaaattctggcttg
tgcaatgaagatcatctctcttacttcaaatttataggtcgtgtagctggaatggctgtt
taccatggcaagcttttggatgccttttttattcggcctttttacaagatgatgcttcaa
aaaccaataacgcttcatgacatggaatctgtggacagtgaatattacaattctctgaaa
tggattcttgaaaatgacccagcagaattggacctcaggtttatggttgatgaagaacta
tttggacagacacatcaacatgatttgaaaagtggcggatcagaaatagtagttaccaac
aagaacaagcgagactatattcaccttgtaattcagtggaggtttgtgagcagagtccag
aaacaaatggctgcctttaaggagggattttttgaactaataccacaagacctaatcaaa
atttttgatgaaaatgaattagagttattaatgtgtggactaggagatgtggatgtggct
gactggaaactacatacaaaatacaaaaatggctacagcataaatcaccaagttatacag
tggttttggaaggcagtgttgatgatggattccgaaaagcgaatacgattacttcagttt
gtcactggcacatcccgtgtacctatgaatggatttgctgaattatatggttcaaatgga
ccacagttgtttacaatcgaacagtggggcacccctgaaaaactgccaagagctcatact
tgctttaatcgcttggatttgcctccatatgactcatttgaagatttatgggaaaaactc
ctcttagcaattgaaaatactcagggttttgatggagttgattag
DBGET
integrated database retrieval system
