Alligator mississippiensis (American alligator): 102563567
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Entry
102563567 CDS
T03087
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon, catalytic subunit
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03030
DNA replication
amj03410
Base excision repair
amj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102563567 (POLE)
03410 Base excision repair
102563567 (POLE)
03420 Nucleotide excision repair
102563567 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amj03032
]
102563567 (POLE)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102563567 (POLE)
Enzymes [BR:
amj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102563567 (POLE)
DNA replication proteins [BR:
amj03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102563567 (POLE)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102563567 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
102563567
NCBI-ProteinID:
XP_019344507
LinkDB
All DBs
Position
Un
AA seq
2039 aa
AA seq
DB search
MDAQFGFERMKDPGEKTGWLINMHPTEILDEDKRLVSSVDYYFIQEDGSRFKVALPYKPY
FYIATRKGCEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFSTVDDL
VKVRKEISPAVKKNQEQDQASDAYTSMLSSVLTGSSLTTDDAEPLKKAANQMDNIIDMRE
YDVPYHVRLSIDLKIHVAHWYNVRYRGNVYPPEITRRDDLVERPDPVVLAFDIETTKLPL
KFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCIFNEPDEAHL
IRRWFEHIQETKPTIFVTYNGDFFDWPFVEARAAVHGLNMHQEIGFQKDSQGEYKTSQCI
HMDCLRWVKRDSYLPVGSYNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDA
VATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAHHANIIFPNKQEQE
FNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTLRHAIE
EEEGLPLDQVTNFQEVCDEIRVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPS
AMVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPFYPDGP
PRAFHELSHEEQAKYEKKRLADYCRKAYKKIRVTKVDERITTVCQRENSFYVDTVRAFRD
RRYEFKGLHKVWKKKLAAAMEIGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKG
ARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSNNV
KKPKVTISYPGAMLNILVKEGFTNDQYQELVDPTSLTYVTRSENSIFFEVDGPYLAMILP
ASKEEGKKLKKRWEFQPICHPPDFVIIYVTSAQFIYKFPCTLFPPQVTTNQPQERTPNPQ
VADMEDFGTIKPLQPLMPIASKRKRISAAVESQQASQNLELTQSWREILGPPPPLGTTKE
ERLVWLRYHKKKWELQARQRRERQKKRRLEDGGVVLGGGVIRDASSTGLSSYLRRTARSI
LDLPWQIVQVAETSQPGLFRLWAVIGNDLHCMKLSISRLFYVNQRIAKPEEGAIYRKVNR
ILPRSNLIYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLLRALIHLGCVCM
VNKQLVRHLSGREAETFSLEHLEMRSLAQFSYLDPGSIRHIYLYHNSQSRRALFGLFIPS
QRKASIFVLDTVRSNQMPNLTSMYSSEHSTMLAKVGEELLPPDKHTFEVRAETDLKTVYR
AIQRLLLGYKDERRGPTLIAVQSNWDLKQLVSGIPVFEEFPLVPVRVTDDISYGVLDWQR
HAARHMIRQYLSLDMCLSQAFEMSRYYHIPIGNLPDDISIFGSDLFFSRHLHRHNHLLWL
SPTSRPDLGGKEADDNRLVMEFDDRASVEINNPGCYSTVCLELDIQSLAVNTILQSHHIN
DMEGASSVSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILKSMVVGWVKEI
TQYHNIYADNQVIHFYRWLRSPSSLLYDPVLHRTLHNMMKKLFLQLVTEFKRLGSSVVYA
NFNRIILCTKKRRIEDAIGYMEYIINSIHSKEIFHSLTISFSRCWEFLLWMDPANYGGIK
GKVPSNIHYGEKDTNKRQEVDEEDSEEEEEGEAEASEEQDGEASVEDLLENNWNIVQYLP
QAASCQSYFLMIVSAYIVAVYHSMKEEMRRNTPGSTPIKRRTNSQASQEVVGETGAMPGM
ITFSQDYVSNELTQSFFTITQKIQKKMSGSRNASEPSEMFPVLPGSYLPLTNPALEFIKY
VCKVLSLDANITNQVNKLKRDLLRLIEVGEFSEEAQFQDPCRSYVLPEVICRNCNFCRDL
DLCKDPALSQDGSVLPSWVCSNCQAEYNSDSIEKALVEALQKKLMAFTLQDLMCVKCKGV
KESHMPVYCSCAGDFNLMIQTKTFVEHINIFQNIARHYNMAYLLETIEWLLQMNPQLLR
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcagtttgggtttgagcggatgaaggaccctggcgagaagaccggctggctc
atcaacatgcacccgacagagatcctggatgaagataagcgcttggtcagctctgtggat
tattatttcatccaggaggatggtagtaggtttaaggtggccctgccctacaagccatac
ttctacattgcaactcgaaagggctgtgaacgagaagtatcttccttcctttccaagaag
tttcaagggaaaattgcaaagctggaaactgtgccgaaagaggatttggatttgccaaat
catctggtgggtctgaagcgaaactacatcaaattgtccttcagcacagtggatgacttg
gtgaaggtgcggaaggagatctctcctgcagtcaagaagaaccaagagcaagaccaggca
agcgatgcctacacatccatgctatccagtgtactaactggcagcagcctgaccacagat
gatgcagagcctttgaaaaaggcagccaaccagatggacaacataattgatatgcgggag
tatgatgtcccataccatgttcgcctgtccattgatctgaagatccatgtggctcattgg
tacaatgtccgctaccgtggcaatgtctaccctccagaaatcacccgcagagatgacctg
gtagagcgaccggatcctgttgttctggcctttgatatcgaaaccaccaagctccccctg
aagttccctgatgcagagacggaccagatcatgatgatctcttacatgattgatggtcag
ggctacctgatcacgaacagagagattgtctctgaggatattgaagattttgagtttact
cctaagccagagtatgaaggccctttctgcatctttaatgagccagatgaggcccattta
attcggaggtggtttgagcatatccaggagaccaaacccaccatctttgtcacttataat
ggagacttctttgactggccctttgtggaagccagagcagcagttcatggactgaatatg
catcaggaaattggattccaaaaagacagtcaaggggagtacaaaacctcacaatgcatc
cacatggactgtctcagatgggtaaagagagacagttacctcccagtaggaagctacaac
ctgaaagcagcagctaaagcaaagctgggttatgacccagtggagctggaccctgaagag
atgtgccggatggctacagaggaacctcagactctggccacctattcagtgtctgatgca
gttgctacatactatatgtacatgaagtatgttcaccctttcatctttgccttgtgcacc
atcattcccatggagcctgatgaggtgttacggaagggttctggaacgctgtgtgaagca
ctgctgatggtccaggcccatcacgccaacataatcttccccaacaagcaagagcaggaa
ttcaacaagctcaccgaggatggtcatgtgctggactctgagacttatgttggtggccat
gtggaggcactggagtctggggttttccgcagtgacatcccatgtcgcttcaaaatgaat
cctgctgcctttgacttcctgctacagcgtgtggagaagaccttaagacatgccattgag
gaagaagagggtttgccattggatcaagtcaccaatttccaggaggtttgtgatgaaatc
agagtcaagctgaattccttgaaggatgttcctaatcggattgagtgtccccttatatac
catctggatgtgggagccatgtatcccaacatcattctaacaaataggttgcagccctct
gcgatggtggacgaggccacatgtgctgcctgtgactttaacaagccaggtgccaattgt
caacgtcgcatgacctggcaatggagaggggaattcatgcctgcgagccgcagtgagtat
caccgcatccagcagcagctagagtcagagaagtttcctccattctacccagatggacca
ccccgtgcctttcatgagctctcccatgaggaacaggccaagtatgaaaaaaagcgatta
gcagattactgccggaaggcctataagaagatacgtgtcaccaaggtggatgaacgcatc
accactgtttgtcagcgggagaattcattctatgtggacactgtgcgagctttcagagac
cgtcgctacgagttcaaggggctgcataaggtgtggaagaagaagctggctgcagccatg
gagattggagatgcctctgaagtaaagcgctgcaagaatatggagatcctgtatgactct
ttgcagctggctcacaagtgtattctcaactctttctacggctatgtcatgcgcaaaggg
gctcgctggtactccatggagatggctggaattgtttgcttcactggagcaaatatcatt
acgcaggccagggaactgatagagcagattgggaggcccctggagctcgacactgatgga
atctggtgcgtccttcccaacagcttcccagaaaactttgtaatcaaatcaaacaatgta
aagaagcccaaagtgaccatctcatatccaggtgccatgctgaacatcctagtgaaggaa
ggcttcacaaatgatcagtaccaagagcttgtggatccaacctcactcacctatgtcacc
cgatcagagaacagcatcttctttgaagtggatggaccatacctggccatgatcctacca
gcctccaaggaagaaggcaagaagctaaagaaaaggtgggaatttcagccaatttgccat
ccacctgactttgtaatcatctacgtcacatctgctcagtttatttataagtttccttgc
actttgttccctcctcaggtcactaccaaccagcctcaggagagaactccaaacccacag
gttgctgatatggaggatttcggaaccatcaagccacttcaaccattgatgcccattgca
agtaagcgcaagaggatctcagcagcagtggagagccagcaggcatcccagaacctggag
ctgacccagtcctggagggagatcctgggcccacctccacctttgggcaccaccaaggag
gagcggttggtctggcttcgctaccacaagaagaagtgggagctgcaggctcggcagaga
cgggagcgccagaaaaagcggcgattagaagatggaggggtggttctgggcggaggggtg
atcagggatgcatcttccacgggccttagcagctacctgcgtaggacagcacgcagcatc
ctggatctgccttggcagatagtacaggttgctgaaactagccagcctggcctattcagg
ctgtgggctgttattggaaatgacctgcattgtatgaaattgagtatctcaaggctattc
tatgtcaatcagcgcattgcaaagccagaggagggagctatctatagaaaggtgaataga
atcctgccccgctctaacctcatctataacttatatgaatactcggtccctgaagacatg
taccaagaacacatcaatgagatcaatgctgacctgtctgccccagacattgagggagtg
tatgagactcaggtgccattactgctgcgtgccttgatccatctgggctgtgtatgcatg
gtcaacaagcagctggttaggcacctctctggtcgggaggctgaaaccttcagcctagag
cacttggagatgcgttcactggcccagttcagctacctagacccaggaagcatacgacat
atctatctctaccacaactcccaaagcagaagggcactctttggcctcttcatcccatct
cagcgcaaagcctcaatatttgtgctggacacggtacgcagtaaccaaatgccaaacctg
accagtatgtactcatcagagcatagcactatgctggcaaaggtgggcgaggagctgctc
cctcctgacaagcacacattcgaggtgcgagctgaaactgaccttaagaccgtctatagg
gctatccagagacttttgctgggctacaaggatgaacgtcggggccccacactgattgct
gtacagtccaactgggaccttaagcagttggtgagtgggattcctgtcttcgaagagttt
ccactggttcctgtccgggtgacagatgacatcagctacggagttctggactggcagcgc
catgctgctcgccatatgatccgtcagtatctcagcctggacatgtgcttatcccaagcc
tttgagatgagcaggtattatcacattcccattgggaatctccctgatgacatctccatc
tttggttctgaccttttcttctcccgtcacctccatcgtcacaaccacctgctgtggctc
tcgcctacatcccgcccagatcttgggggcaaggaggcagatgacaatcgcctggttatg
gaatttgatgaccgagcctcagtggagataaacaaccctggctgctactccacagtgtgt
ctggagctggatatccagagcctggctgtaaacaccattctgcagtcccatcacatcaac
gacatggaaggagcctctagcgtaagcattagctttgatgtgatccagcaggcatctctt
gaggacatggttacagggaaccaggctgccaacatcccagctagttatgatgagacagca
ctctgctcaaacactttcaggattctgaagagcatggtggtgggctgggtgaaggagatt
acacaataccacaacatctatgcagataaccaagtgatccatttttatcgctggcttcgc
tcaccatcctcattgctgtatgacccagtattgcaccggacactgcataatatgatgaag
aaactcttcctacagctggtaactgagttcaaacgtcttggctcttcagtggtttatgcc
aacttcaatcgcatcatactgtgcaccaagaagcgacgtattgaggatgccattggctac
atggaatacattatcaacagcattcactcaaaagagatcttccactctttgaccatctca
ttctcccgttgctgggagttccttctctggatggacccagcgaactatggggggatcaaa
gggaaagtgccatctaacatccactatggagagaaagacaccaacaaaaggcaagaggtg
gatgaagaggacagtgaggaggaggaagagggggaggcagaagcaagtgaggaacaagat
ggagaggccagtgtggaagacttactggagaacaactggaacattgtacaatacctaccc
caagctgcctcctgccagagctatttcctcatgattgtgtcagcctacattgttgctgtg
tatcacagcatgaaggaggagatgagacgcaatactccagggagtacccctatcaagaga
aggaccaacagccaggcctcccaagaagttgtgggggaaacaggtgccatgccaggtatg
atcactttctcacaggattatgtctctaatgagctcactcagagcttcttcacgatcacg
cagaaaatccaaaagaagatgagtggttcccgcaatgcctcagagccctcagaaatgttc
ccagtacttccaggctcttacctgccactcaccaacccagctctggaatttattaagtat
gtttgtaaggtgctgtccctagatgcaaatataaccaaccaagtaaataagctgaagcga
gatctcctgcgcctgattgaagtcggtgaattctcagaggaagcccagtttcaggacccc
tgccgttcctatgtactccccgaggttatctgcaggaactgtaacttctgtagggacctt
gatctctgcaaagaccctgctctctctcaggatgggtctgtgttgcccagctgggtgtgt
tcaaactgccaggcagagtacaattctgactccatcgaaaaagcattggtggaggccctg
cagaagaagctgatggccttcacgttgcaggacttgatgtgtgtgaagtgcaaaggcgtg
aaggaaagccacatgcctgtgtactgcagctgtgcaggagacttcaacctgatgatccag
accaagacctttgtggaacacataaacatctttcagaatatcgcccggcactataacatg
gcctacctactggagaccattgagtggctgctgcaaatgaacccacagctcctgcggtga
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integrated database retrieval system
