Alligator mississippiensis (American alligator): 102563600
Help
Entry
102563600 CDS
T03087
Symbol
PCDH7
Name
(RefSeq) protocadherin 7
KO
K16498
protocadherin delta 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102563600 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
amj01009
]
102563600 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102563600 (PCDH7)
Protein phosphatases and associated proteins [BR:
amj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102563600 (PCDH7)
Cell adhesion molecules [BR:
amj04515
]
Cadherins
Protocadherins
102563600 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
LYRIC
KIAA1549
CesT
Motif
Other DBs
NCBI-GeneID:
102563600
NCBI-ProteinID:
XP_019335932
LinkDB
All DBs
Position
Un
AA seq
1233 aa
AA seq
DB search
MRKMRTLLGCMRCCCCCCCFLLLLPPPLWLSLAAAKQLLRYRLAEEGPADIRIGNVASDL
GIVTGSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVS
VIGPSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRN
GXXXXXGALYPGGSKRRQEADGAGRSTVFELQVADTVDGEKQPQLIVKGALDREQRDSYE
LSLRVRDGGEPARSSQAILRVLITDVNDNSPRFEKSVYEADLAENSSPGTPILQLRATDL
DVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPK
TDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGVASVAEDVLVDTPVALVQVSDRDQGEN
GVVTCTVVGDVPFQLKPASESEGEPQNKRKYFLHTSAPLDYEAVRDYHVVIVAVDSGSPS
LSSNNSLLVRVGDTNDNPPVFGQAVLEVSFPENNVPGERVATVVATDADSGKNAEIAYSL
EPSPLSAETLGGLFSIDPDSGDVLVQAVLDREQRDTYEFQVTARDKGVPVLQGSTTVVVR
VADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAELSLSIQAGEQDGAAG
IFSIENDTGTIYSTMSFDREQQTSYTFRVKAVDGGEPPHSATATVSLFVMDENDNAPTVT
FPSNSSYTVLPPSSNLRTVVATVVATDTDAGLNADLNYSIVGGNPFRLFEIDPASGVVSL
VGKLEPKHYGLHRLVVQVNDSGQPPQATTALLHVFVNESLSNATVVESQVARSLHTPLAQ
DIAGDPSYELSKQRLSIVIGVVAGIMTVILLILVVVMARYCRSKGKHGYEAGKKDHEDFF
TPQQHDKAKKPKKDKKGKKGKQPLYSSIVTVEASKPNGQRYDSVNEKLSDSPSMGRYRSV
NGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQELPPANTFVGAGDNISIGSDH
CSEYSCQASGKYSKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRL
GALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRT
SPERKQKSQPKLSTFMPVDERGSQEKLANGEASLMGDRNRNLLNKKLTSSYETFSAASFS
KNEEANPEDIPLTQTGEYKPSPVNTLTRREVYL
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatgcggactctcctgggttgcatgcgctgctgctgctgctgctgctgcttc
ctgctgctcctgcctcctccgctctggcttagcctggccgcggccaagcagctgctgagg
taccggctggccgaggagggacccgccgacatccgcatcggcaacgtggcctccgacctg
ggcatcgtgacgggctcgggcgaggtgacgttcagcctggagtccggctccgactacctg
aagatcgacaacatgaccggggagctgagcaccacggagcggcgcatcgaccgcgagaag
ctgccgcagtgccagatgatctttgacgagaacgagtgcttcctggactttgaggtctcg
gtgatcggcccctcacagagctgggtggacctcttcgagggccgggtcatcatcctggac
atcaacgacaacacgcccaccttcccgtcgcccgtgctcaccctcacggtggaggagaac
cggcccgtggggacgctctacctgctgcccaccgccaccgaccgcgacttcggccgcaac
ggcnatnnnnnnnnnnacggcgccctctaccccggcggcagcaagcggcggcaggaggcg
gacggcgccgggcgcagcaccgtcttcgagctgcaggtggccgacacggtggacggcgag
aagcagccgcagctgatcgtcaagggtgcgctggaccgtgagcagcgggactcctatgag
ctgagcctgcgggtgcgggacggcggcgagccggcgcgctcgtcccaggccatcctgcgg
gtgctcatcaccgacgtgaacgacaacagcccgcgctttgagaagagcgtgtacgaggcg
gacctggcggagaacagcagccccgggacgcccatcctgcagctgcgggccaccgacctg
gacgtgggggtgaacgggcagatcgagtacgtcttcggggcggccaccgagtcggtgcgg
cgcctgctgcggctggatgagacctcgggctggctcagcgtcctgcaccgcattgaccgc
gaggaggtcaaccagctccgcttcaccgtcatggcccgcgaccggggccagccgcccaag
accgacaaggccacggtggtgctgaacatccgggatgagaacgacaatgtgcccaccatt
gacatccgcaagattgggcgcatcccgctgcgggacggcgtggccagcgtggccgaggat
gtgctggtggacacgccggtggcactggtgcaggtgtctgaccgcgaccagggcgagaac
ggtgtggtgacctgcactgtggtgggggacgtgcccttccagctcaagccggccagcgag
agtgagggtgagccgcagaacaagcgcaagtacttccttcacacctctgcaccgctcgac
tatgaggctgtccgcgactaccatgtggtgatcgtggctgtggactcaggcagccccagc
ctgtcaagcaacaactcgctgctcgtgcgtgttggcgacaccaacgacaacccacctgtg
ttcggccaggctgtgctagaggtgtccttccccgagaacaatgtgccaggtgagcgagtg
gccacggtggtggccacagatgcggacagcggcaagaacgctgagatcgcctactctctg
gagccgtcgccattgtcagctgagacacttggcggcctcttcagcatcgaccccgactct
ggggatgtgctggtgcaggccgtgctggatcgtgagcagcgtgacacctatgagttccag
gtgacggcccgcgacaagggtgtgccggtgctgcagggctccaccactgtggtggtacgt
gtggcagaccgcaatgacaatgagccgcgcttcatgcaagatgtcttcaccttctatgtg
aaggagaacctgcaacccaacagccctgtgggcatggtgactgtcatggatgctgacaag
ggccgcaacgctgagctcagcctgtccatccaggctggtgagcaggatggtgcagctggc
atcttctccattgagaatgacacgggcaccatctactctaccatgtccttcgacagggag
cagcaaaccagctacaccttcagggtgaaggcggtggatggcggagaaccaccccactca
gccactgccactgtgtccctcttcgtcatggatgagaatgacaatgcacccaccgtcacc
ttccccagcaacagttcctacactgtgctgccaccctccagcaacctgcgcactgtggtg
gccaccgtggtggccactgacactgatgctggcctcaacgctgacctcaactacagcatt
gtaggtggcaaccccttcaggctctttgagatcgacccagccagtggtgttgtgtcactt
gtgggcaagctggagcccaagcactatggcctccaccgtctcgtggttcaggtgaatgac
agcggtcagccaccccaggccaccaccgccttgcttcatgtctttgttaacgagagcctc
tccaatgccaccgtggtggagagccaggtggcccgcagcctgcacacgcccctggcccag
gacattgctggtgaccctagctatgagctgagcaagcagcgcctcagcatagtcatcggt
gttgtggctggcatcatgactgtcatcctgctcatcctggtggtggtcatggcccgctac
tgccgctccaagggcaagcatggctacgaggctggcaagaaggaccacgaggacttcttc
accccacagcagcatgacaaggccaagaagcccaagaaggacaagaagggaaagaagggc
aagcagcctctctacagcagcatcgtcaccgttgaggcctccaagcccaatgggcagcgc
tacgacagtgtcaacgagaagctctccgacagccccagcatgggccgctaccgctcggtc
aatggtgggccaggcagccctgacctggcccggcattacaaatccagctctccactgcct
actgtccagctgcacccgcagtcccccaccgccgggaaaaagcaccaggctgtgcaggaa
ctgcccccggccaacacttttgtgggggcaggagacaacatctccatcggatcggaccac
tgctccgagtacagctgtcaagccagtggcaagtacagcaagcagccatttcgtagagtg
acgttttctgttgtgagtcagcctcaggacccacatcaagggtcattgcagagttgctat
gacagcggtctggaggagtcagaaacaccaagcagtaagagttcatcagggccaagactg
ggtgcccttccactcccagaggacaactacgaaaggactacgccggatggcagtgttggt
gaggcagagcatatggaaaatgattcaaggcctctaccagatgtagccctgacggggaag
tgtacccgagagtgtgatgaatatggccactctgattcctgctggatgccagttcgcact
tcacctgaaagaaagcagaagagccagccaaaactctccacgttcatgcctgttgatgaa
cgaggcagtcaggaaaagctggccaatggagaagcctccctcatgggtgatcgcaacaga
aacctccttaacaaaaagttgacctcatcctatgagaccttcagtgcagctagtttcagc
aaaaacgaggaagccaatccagaggatattcccctcacacagacaggggaatacaagcca
tctcctgtcaataccctaacgagaagagaagtttacctgtag
DBGET
integrated database retrieval system
