Alligator mississippiensis (American alligator): 102563775
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Entry
102563775 CDS
T03087
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid type A receptor alpha1 subunit
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04080
Neuroactive ligand-receptor interaction
amj04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102563775 (GABRA1)
04082 Neuroactive ligand signaling
102563775 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102563775 (GABRA1)
Ion channels [BR:
amj04040
]
Ligand-gated channels
GABA-A
102563775 (GABRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102563775
NCBI-ProteinID:
XP_006274708
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All DBs
Position
Un
AA seq
454 aa
AA seq
DB search
MKRIVALCDYLWAWGLLLNALTGRSYGQTSLQDEIKDNTTIFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWRDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPAKSVVVADDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
LIKKNNTYTAAATSYTPNIARDPGLATIAKSATIEPKEIKPETKPAEPKKTFNSVSKIDR
LSRIAFPLLFGIFNLVYWATYLNREPQLAPTPHQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaattgtggcactttgtgactatctttgggcctggggcctccttttgaatgca
ctgactggaagaagctatggacaaacttcattacaagatgaaattaaagacaacactacc
atatttaccagaatactggaccgtctgctagatggctatgataaccgcctgagaccagga
ttgggagagcgtgtaactgaagtgaagactgacatcttcgtcaccagttttgggcctgtt
tcagatcatgatatggaatatacaatagatgtattttttcgtcaaagctggagagatgag
agactaaaatttaaaggacccatgaccgtcctccggctgaataatttaatggccagcaag
atttggacacctgatacctttttccacaacggaaagaagtctgtggctcacaatatgaca
atgcctaacaaactattacgtattacagaagatgggacactgctgtatacaatgaggctg
acagtgagagcagaatgtccaatgcatttagaagactttcctatggatgcacatgcctgc
cccttgaaatttggaagctatgcctataccagggcagaagtggtgtatgaatggacacgg
gaaccagcaaaatctgtggttgtggctgatgacggttctcgattgaaccaatatgacctc
ctggggcaaactgtggactctggaattgtacagtccagtacaggagaatatgttgttatg
actacccacttccatttaaagagaaagattggttattttgtcattcagacttatctacca
tgcatcatgacagtgattttgtcccaggtctccttctggcttaacagagaatctgttcca
gcaagaactgtatttggagtgacaactgtcctgacaatgacaaccttgagtatcagtgca
aggaattcccttccaaaggtagcctacgccactgctatggattggtttatagcagtgtgc
tatgcatttgtgttttcagccctcattgaatttgcaacggtgaactacttcacaaagaga
ggttatgcatgggatggcaaaagtgttgttcctgaaaagccaaagaaagtgaaggatcct
ctcattaagaaaaacaacacatatacagcagcagcaacaagttatacccctaacattgca
agggaccctggactggctaccattgctaaaagcgcaacaatagagcccaaagaaattaaa
ccagaaacaaaacctgcagaaccgaagaaaacttttaacagtgtcagcaaaattgatcga
ctatcaagaatagctttcccattgctctttggtatctttaatttagtctactgggccact
tatttaaacagggagccccagctagccccgactcctcatcaataa
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