Alligator mississippiensis (American alligator): 102563784
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Entry
102563784 CDS
T03087
Symbol
DHX34
Name
(RefSeq) DExH-box helicase 34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102563784 (DHX34)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102563784 (DHX34)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102563784 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
Motif
Other DBs
NCBI-GeneID:
102563784
NCBI-ProteinID:
XP_019351049
LinkDB
All DBs
Position
Un
AA seq
895 aa
AA seq
DB search
VGYQIRFESSRSPATRIVFLTEGLLLRQVQREPTLPGYRVLIVDEVHERHLHADFLLGVL
RRLLPARPDLKLILMSATINIRLFSSYFGGAPVVQVPGRLFPITVIYQPIPPEEAAGAGG
KQERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQTYATHTQRWVVLP
LHSTLSIAEQDKVFDLPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQAKL
QRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQM
KSMCLGDPRSFPFLEPPPPSSLETAMRYLREQGALDDAEDLTPIGSLLAQLPVDVVVGKM
LVLGVLFGLAEPVLTAAALLSVQSPFLRPAHANPDCATARRPLESPHGDPLTLLNTFNQW
VQVKSERSSNSRKWCRRRGLEEHRLYEAANLRRQFQDLLRDHGLVKVASARASDSYTRQS
RHRERRELHRLWRRHEQTEGRRRKALKLQDGEAASSSEDEGAGAPGDGDRARSVDIQDVK
FKLRHNVDELQAVSGSALSPQQLALLKLVLCRGLYPQLAVPDSFNSCRKDSDQIFHTRSK
QGVVLHPTSVFATSPELLLPKEERGKSQESKEGLSSRHQLLAFVSLLETNKPYLVNCVRV
PALQALLLFSRCLDTSADCTRLVADAWLELHVPDSEAALRLLSAALQHRAAWERLLNQQL
EGRAGVPEPGPDAREVTALTRGLLEFMQSEVQYSLHRLSGLEKQSLYVGPQTVAAAPGLP
GLFQGAEMTPDEVKGGYRVTDYLTYNCLTSDTDLYSECLRSFWTCPHCDLHMPFTPLERV
SHERSCRPAEEPPPEEPAESLSKTSALQRLYHCDACQRDFMFTSTEILRHRKQHQ
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtcgggtaccagatccgtttcgagagcagccggtcgccggccaccaggatcgtcttcctg
acggaggggctgctgctgcggcaggtgcagcgcgagccgacgctgcccgggtaccgggtg
ctgatcgtggacgaggtgcacgaacgccacctgcacgccgacttcctgctgggcgtgctg
cgccgcctcctgcccgctcgccccgacctcaagctcatcctcatgtcggccaccatcaac
atccgcctcttctccagctacttcgggggtgcccccgtggtccaggtgcccgggcggctc
ttccccatcacggtcatttaccagcccatccccccggaggaggcagcaggggcaggcggg
aagcaggagcgcctggacccccggccctacctgcgggtgctgcaggccatcgaccacaag
tacccgcccgaggagcgcggcgacctgctggtcttcctcagcggcgtggccgagatcggg
gccgtgctggaggccgcgcagacctacgccacccacacgcagcgctgggtggtgctgccc
ctgcacagcaccctctccatcgccgagcaggacaaggtctttgacctgccgcccccgggc
gtccgcaagtgcatcctctccaccaacattgccgagacctcggtcaccatcgacggcgtg
cgcttcgtcctggactccgggaaggtgaaggagatgagctacgatccccaggccaagctg
cagcggctgcaggagttctggatcagccgggccagcgcagagcagcgcaaggggcgtgcg
ggccggacggggccgggcgtgtgctaccggctctacgccgagtccgactatgacgccttc
gccccctaccccgtgcccgagatccagcgcgtggcactcgatgccctggtgctccagatg
aagagcatgtgtctgggcgacccccggagcttccccttcctggagccaccgccaccgtcc
agcctggagacagccatgcgctacctgcgggagcagggggccctcgatgacgccgaggac
ctgacacccatcgggagcttgctggctcagctgcctgtggacgtggtggtcgggaagatg
ctggtcctcggggtgctgttcggcctggccgagccggtgctcacggccgcagcactgctg
agcgtgcagtccccgttcctgcgccccgcgcacgccaaccctgactgtgctacagcccgc
cggcccctcgagagcccccacggcgaccccctcacactgctcaacaccttcaaccagtgg
gtgcaggtgaagtcggagcggagcagcaactcgcggaagtggtgccggcgccggggcctg
gaggagcatcggctctacgaggcggccaacctgcgacgacagttccaggacctgctccgg
gaccacgggctggtgaaggtggcatccgcccgggccagcgacagctacacgcggcagagc
cggcaccgggagcgccgggagctgcaccggctgtggcggcgacacgagcagacggagggc
cggcggcgcaaggcgctcaagctgcaggacggggaggctgcgtcctccagcgaggatgag
ggtgcgggcgcccccggggatggagacagggcacgcagcgtcgacatccaggacgtcaag
ttcaagctgcgtcacaacgtggacgagctccaggccgtgtccggctcggccctgtccccc
cagcagctcgccctgctcaagctggttctgtgtcggggcctctacccccagctggccgtg
cccgactccttcaacagctgccgcaaggactctgaccagattttccacaccaggagcaag
cagggggttgtcctgcacccgacttcggtctttgccaccagccccgagctgctgctgccc
aaagaggagcgtgggaagagccaagagtccaaggaggggctgagcagccgccaccagctc
ctggccttcgtgtcgctgctggagaccaacaagccctacctggtgaactgcgtgcgggtc
ccggcgctgcaggccctgctgctcttctcccgctgcttggacacgagcgccgactgcacg
cgcctggtggcggacgcctggctggagctgcacgtgcccgacagcgaggctgccctgcgc
ctgctctccgcggccctgcagcaccgcgccgcctgggaacggctgctgaaccagcagctg
gagggcagggctggggtgccggagccggggccggacgcccgggaggtgacagcgctgacc
cgggggctgctggaattcatgcagtcggaggtgcaatacagcctgcaccggctctcggga
ctggagaagcagagcctgtacgtgggcccccagacagtggcagccgcgccggggctcccg
gggctcttccaaggagcggagatgacgcccgacgaggtgaaaggcgggtaccgcgtgact
gactacctgacctacaactgcctcactagcgacaccgacctatacagcgagtgcctgcgc
agcttctggacctgcccgcactgcgacctccacatgcccttcaccccactggagcgcgtg
agccatgagaggagctgccggcctgccgaggaaccgcccccagaggagcctgcggagagt
ttgtccaaaaccagcgctctgcagagactgtatcactgcgacgcctgccagcgggacttc
atgttcacgtccacggagatcctgcggcacaggaagcagcaccagtga
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