Alligator mississippiensis (American alligator): 102563811
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Entry
102563811 CDS
T03087
Symbol
MMS19
Name
(RefSeq) MMS19 homolog, cytosolic iron-sulfur assembly component
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102563811 (MMS19)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102563811 (MMS19)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102563811 (MMS19)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
102563811 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
Motif
Other DBs
NCBI-GeneID:
102563811
NCBI-ProteinID:
XP_019351030
LinkDB
All DBs
Position
Un
AA seq
996 aa
AA seq
DB search
CVISDPSRPAGLRAGSWTALDVVEALGSSLEHPEPRTRARGLQLLGQVLLRCHGALRHAE
VTHLVLFFEARLKDHHLVIPAVLHGLHALSLSEALAPGLAVSVLKAIFQEVHVQSLLQLD
RHTVYTIITNFMRXXPAELKSLGTDFTFGFIQVMDGEKDPRNLLVAFQIVRDLVLKGYAL
GPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLIISLRAVLASTPQFAEFLLPLLIEKM
DSELQSAKLDAVQTLSACCAIYGPKELQEFLPSLWASLRREVFQTASEKLEAECLGTLTA
LAACLSHAVLHADTHDPLDTFLSGVLQDCRHHLCEPDMKLVWPSAKLLQAAASASLRAYH
HIAGSVLPLLLEQYNQHPQSSQRRTILEMLLGFLELLQKWGHEEGDETVLLGVRAPLCSV
VFSALTDPSVQLQIVGVRALTVLGALPGLLVASDLDLAVDHLTRLVLHEEDPQSSMAAME
AAGTLAPAHPGAFTDHMVRALAQELQTEREDEGTRHQRCLQALAAVSTHPSIVRETVPVL
LQHLRHLQRGSEPGDTGKTASLCRSLHRVAVQSQHDPESCSFYHQAVVPCLLGLALQAAL
QEDALLAPGKALLEEEALTSMVPVISAASTHLSPELAVQSAALIVPLFLDGDVSFLPQNS
FPCSFQPFQDGPCLAAQRRLVTLLMAFICSLPRNVPVPQQDRLLRELLALSCACDCPFAA
TAAAKCFAGLVNKHPEGPQLDEVLQLALNRLEPGLAEGPRRTQALGLLLWVTKALVLRYH
PLSSRLTDKVLALLGDAELGPAAAEGLGLLLGDAPDVLHRGCHADVRLMYRQRFFTDNVP
RLVQGFHAAHSDVKANYLKGLSHVLNHLPKPVLVTELPTLLPLLLEALSCLDRGVQLSTL
RCLQPLLLEAPRALSPHGDTLVTKFLSLTDSPAMAVRIAALRCIHALTSLPAPGLLPYKA
RVIRALAKPLDDKKRLVRKEAVVARGDWFLLGSPGR
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
tgtgtcatctctgacccttcccgtcccgcagggctgcgcgccgggagctggacggcgctg
gacgtggtggaggcgctcgggtcgtcgctggagcacccggagccgcgcacacgcgcccgc
gggctgcagctgctgggccaggtcctgctgcgctgccacggcgccctgcgccacgcggaa
gtgacgcacctggtgctgttcttcgaggcgcgcctgaaggaccatcacctggtgatcccc
gccgtgctgcacggcttgcacgcgctgagcctgagcgaggcgctggccccgggcctggcc
gtgtcggtgctcaaggccatcttccaggaggtgcacgtgcagtcgctgctgcaactggat
cggcacacggtctacaccatcatcaccaacttcatgcgnnnnntccctgcagagctgaag
agcctcggcaccgacttcaccttcggcttcatccaggtgatggacggcgagaaggacccg
cgcaacttgctggtcgccttccagatcgtccgcgacctcgtcctcaagggctacgcgctc
ggcccctttgtggaggagctgtttgaggtgacgtcctgctacttccccatcgacttcacc
ccgccccccaacgacccccacggcatccagcgggaagatctgatcatcagcctccgcgcc
gtgctggcctccacgccccagttcgctgagttccttttgccgcttctcatcgagaaaatg
gactcggagctgcagagcgccaagctggacgccgtgcaaaccctgagtgcctgctgtgcc
atctacgggcccaaggagctgcaagagtttctgcccagcctttgggcttccctgcgtcgg
gaggtgttccagacagcgagcgagaagctggaggcagagtgcctgggtacactgacagca
ctggccgcctgcctgtcccacgccgtgctccacgccgacacccacgacccgctggacacc
tttctcagtggtgtgctgcaagactgccggcaccacctgtgcgagcctgacatgaagctg
gtgtggccaagtgccaagctgttgcaagccgcagccagcgcctcactccgggcctatcac
cacatcgctggcagcgtcctgcccctgctgctggagcagtacaaccagcacccccagagc
agccagcggaggacgatcctggagatgctgctgggcttcctggagctgctgcagaagtgg
gggcacgaggagggcgacgagaccgtcctgctgggcgtccgtgccccgctgtgctccgtg
gtgttctcggcactgacggaccccagcgtgcagctgcagatagtgggtgtccgggccctg
accgtgctgggcgcgctcccagggcttttggtggcctcagacctggacttagctgtggac
catttgacacgactcgttctccatgaggaggatccccagagcagcatggcagcgatggag
gccgcaggcaccctggcacctgcccaccctggggccttcacagaccacatggtgcgggca
ctggcacaggagctgcagacagagcgggaggatgagggcacccggcaccagcgctgccta
caggctttggctgctgtgtccacccaccccagcattgtgcgtgagaccgtccccgtcctg
ctgcagcatctccgccacctgcagagaggcagcgagccaggggacactgggaaaacggca
tcgctgtgccgcagcctgcaccgcgtggctgtgcagagccagcacgaccccgagagctgc
agcttctaccaccaggccgtggtgccttgtctgctgggcctggccctgcaggctgccctg
caagaggatgctctcctggcgccaggcaaggcgctgctggaggaggaggctttgacctcc
atggtgcccgtcatcagcgccgccagcacccacctgagccccgagctggcggtgcagagc
gcggcgctcatagtgccccttttcctggacggggacgtctccttcttaccccagaacagc
ttcccctgctctttccagcccttccaggatgggccctgcttagcagcgcagagacgtctg
gtcaccctgctcatggccttcatctgctccctgcccaggaacgtgcccgtcccccagcag
gaccggctgctgcgggagctgctggccctgagctgcgcctgtgactgcccctttgctgcc
acggctgccgctaagtgctttgcgggactggtgaacaagcacccagaagggccgcagctg
gacgaggtgctgcagctggcgctgaaccggctggagccgggcctggccgagggtccccgc
cgcacccaggccctcggcctgctcctctgggtgaccaaggctctggtgctgcgctaccac
ccgctgagctcccgcctgacggacaaggtgctggcgctgctgggggatgcagagctgggc
ccggcggcagctgaggggctggggctcctgctgggcgatgcacctgatgtgctgcaccgc
ggctgccacgccgacgtgcgcctcatgtaccgccagcgcttcttcaccgacaacgtgccc
cggctggtgcagggcttccacgctgcccactccgatgtgaaggctaactacttgaagggg
ctgtcgcacgtgctgaaccacctgcccaagcccgtgctggtgacggagctgcccacgctg
ctgccactgctgctggaggcactgtcatgcctggaccgcggggtgcagctctccaccctg
cgctgcctgcagcccctgctgctcgaggccccgcgcgccctgagcccgcacggcgacacg
ctggtcaccaagttcctgagcctcactgacagccccgccatggctgtccgcatcgcggcc
ctgcgctgcatccatgcgctcactagcctgcccgccccggggctgctcccatacaaggcg
cgggtgatccgggccctggccaagcccctggacgacaagaagaggctggtgcggaaggag
gcagtggtggcgcgtggggattggttcctcctgggcagcccgggcaggtga
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