Alligator mississippiensis (American alligator): 102563870
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Entry
102563870 CDS
T03087
Symbol
PSMB8, TAP1, TAP2
Name
(RefSeq) uncharacterized LOC102563870
Organism
amj
Alligator mississippiensis (American alligator)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Proteasome
SMC_N
AAA_29
AAA_22
AAA_15
AAA_21
AAA_16
Zeta_toxin
RsgA_GTPase
SRP54
nSTAND1
Motif
Other DBs
NCBI-GeneID:
102563870
NCBI-ProteinID:
XP_019354685
LinkDB
All DBs
Position
Un
AA seq
1499 aa
AA seq
DB search
MAIPYYTGRMTDWIVSEDDPSGFGYAIWIMSLITIFSAVTEFLCDCVYNTTMNRIHTRLQ
GQVFSSVLRQEIAFFHTNRTGDITSRVTADTEAASEALSEKLSLLMWYGARGAFLYILML
RLSLRLAICTAVGLPLILLVPKFSGKLHQSLAQRVQESLARANEVAVETFQAMPTVRSFA
NEEGAARSYAARLQDTYHLNQKEAAAYALSTWTTSLSGLALKVGILYYGGRLVTAGAISS
GDLVTFVLYEMQFTTAVEVLLSVYPSVQKAVGSSEKIFEYMDRMPQITPSGTLEPSSLCG
HVQVCDVWFSYPGRDDAPVLKGITLELRPGEVTALVGPSGAGKSALVGLLERFYEPQRGR
ILLDGRDLRDYEHHYLHRQVALVSQKPVLFARSLHDNIAYGLGPQNRKEVEAAACRANAH
GFIARLNHGYDTDVGEMGSQVSGGQRQGVAIARALIRDPCVLILDDATSSLDTESQLRVE
EEVYEGARAGRSVLLIAHRLSAVERANCILVLEDGIVQEQGTHQELLAQRGAYWRLFQAQ
EQNGNNGANTGCREECGGPEAMALLEVCGVARSSWDWDWAPPGAEAGAGAVPRGPAHYGF
AARRPELALPPGLQPAEFLRGLAGGSRGRADVRIQLLHGTTTLAFKFQHGVVVAVDSRAS
AGNYIDTLEANKVIEINPYLLGTMSGSAADCQHWERLLAKHCRLYALRNKERISVSAASK
LLANMLGEYRGMGLSVGSMICGWDKKGPGLYYVDNNGTRLSGPMFSTGCGNTYAYGVLDS
GYWPDLTVEEAYALARRAIAQATHRDAYSGGVVNMYHMKEDGWIKVERTDVSDLIHKYLE
AKQAWRLLGPGPPRPAPLAALCLGPALYATLRGCVASAPPASLARGPWGWLLLVYGAAGL
AQLTWGALGRGAGAPSAEEMKQRQQSWALLRRLVGLSWPDLPYLAGAFVFLTLAVIGETF
IPYYTGRIIDVLGGHYNPDAFTAAIGLMCLYSFISSLAVGCRGGLFMFTFSRLNIRTRCQ
LFSSLVHQDLAFFQQVKTGDLTSRLSKDASLMSRSVPANANIFLRSLVKALGLYGFMLGL
SWHLTLLTLLEMPFTMAAQKIYDARYQAVLQAIQDSMASSGEVAREAVASVETVRSFGTE
KEEAQRYAAALAHTRRLKDRRDLERALYLLFRRLLQLAMQVLILYCGHQQIQDGLMTKGG
LVSFLLYQGEVGQYVQTLVYIYGDLLSNVGAAEKVFEYLDRVPAVSTDGTWVPTMLQGHI
AFQDVSFAYPSRPDLLVLQGVSFELRPGVVTALVGLNGSGKSTCVALLERFFEPQAGEVL
LDGKPLHTYEHRYLHRQVVLVGQEPVLFSGSVRDNITYGLEGCSEEQVMAAARAAHANEF
IDMLDQGLETDVGEKGGQLSVGQKQRIAIARALIRQPRVLILDEATSALDVESEAVVRAA
VLSGGARTVMVIAHRMATVEGADHIVVLEGGAVTEQGTHAELMAHQGPYYRLVQRQLIE
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcccatactacacggggcgcatgacagactggattgtgagtgaggatgacccc
tcgggcttcggttatgccatctggatcatgtccctcatcaccatcttcagtgctgtgacg
gagttcctgtgcgactgtgtctacaacaccaccatgaaccgcatccacacacggctccag
ggccaggtgttcagctccgtcctgcgccaggagattgccttcttccacaccaaccgcact
ggcgacatcacgtcacgcgtgacagcggacacagaggcggcgagtgaggcactgagcgag
aagctgagcctgttgatgtggtacggggcacgcggcgccttcctctacatcctgatgctg
cgactgtccctgcgccttgccatctgcaccgctgtgggactgcccctcatcctccttgtg
cccaagttctccggcaagctgcatcagagcctggcgcagcgggtgcaggagtcactggcc
cgggccaatgaggtggcagtggagacatttcaggccatgcccacagtgcgcagctttgcc
aatgaggaaggagcagcgcggagctatgccgcccgactgcaagacacctaccacctgaac
cagaaggaagctgctgcctatgccctctccacctggaccaccagtctctcggggctggct
ctgaaggtgggcatcctgtactacgggggccggctggtgacagctggtgccatcagcagt
ggggacctggtcaccttcgtcctctacgagatgcagttcaccaccgccgtggaggtgctg
ctgtccgtctaccccagtgtgcagaaggccgtgggctcctctgagaagatctttgagtac
atggaccgaatgccccagatcaccccttctgggaccctggagccctccagcctgtgcggg
catgtccaggtgtgcgacgtctggttctcttaccctggacgggacgacgctcctgttctc
aagggcatcacactggagctgcggcctggggaggtgacagcactagtggggccttcaggt
gctgggaagagtgcgctggtgggcctgctggaacggttctatgagccccagcgtggccgc
atcctgctggatgggcgggacctgcgggactatgagcaccactacttgcaccgccaggtg
gcacttgtgagtcagaagccagtgctgtttgcccgctctctgcatgacaacatcgcctat
gggctgggtccccagaaccgtaaggaggtggaggcagctgcctgccgtgccaatgcccat
ggcttcattgcccggctgaaccatggctatgacacagatgtgggcgagatggggagccag
gtctccggggggcagcggcagggagtggccattgcccgagccctgatccgagacccgtgt
gtgcttatcctggatgatgccaccagctccctggacactgagagccagctgcgggtggag
gaggaggtgtacgagggggcgcgggctgggcgctcagtcctgctcatcgcccaccggctc
agtgcagtggagcgggccaactgcatcctggtgctggaggacggcatcgtgcaagaacag
ggtacccaccaggagctgttggcacagcgcggggcatactggcgcctattccaggcccag
gagcagaatgggaacaatggggccaacaccggctgcagggaagagtgtggggggcccgaa
gcgatggcgctgctagaggtgtgcggcgtcgcccgcagctcctgggactgggactgggcg
ccccccggggccgaggcaggagccggagccgtcccgcggggccccgcgcactacggcttc
gcggcgcggcggcccgagctggcgctgcccccggggctgcagccggccgagttcctgcgg
ggcctcgcgggcgggagccggggccgcgccgacgtgcggatccagctgctgcacggcacc
accacgctggccttcaagttccagcacggcgtggtcgtggccgtggactcccgggcctct
gcgggcaattacatcgacaccctggaagccaacaaggtgattgagatcaacccctacctg
ctgggcaccatgtcgggcagtgccgccgactgccagcattgggagcggctccttgccaag
cactgcaggctctacgctcttcgcaacaaagagcggatcagcgtctcggctgcctccaag
ctgctggccaacatgctgggcgagtaccgtggcatggggctgtctgtgggcagcatgatc
tgcggctgggacaagaagggccccgggctgtactatgtggataacaatgggacccgcctc
tctggccccatgttctccactggctgtggaaacacctatgcttatggggtgctggacagc
ggctactggccggacctcactgtggaagaagcctacgccctggctcgccgtgccatcgcc
caggccacacaccgcgatgcctactccgggggtgttgtcaacatgtatcacatgaaggaa
gatggctggatcaaggtggagcggacggatgtcagtgacttaatccacaagtacctggaa
gccaagcaggcctggcgcctgctgggccccgggcccccccgcccggcccccctggccgcc
ctgtgcctgggccccgcgctctacgccacgctgcgggggtgcgtggccagtgccccccct
gcctcgctggcccgtggcccctggggctggctgctgctggtctatggggcagccgggctg
gcccagctcacctggggggcactggggcgaggggctggggcacccagcgcggaggagatg
aagcagagacagcagtcctgggccctgctgcgacggctggtggggctgtcctggcctgac
ctgccctacctggctggagccttcgtcttcctcaccttggctgtcatcggtgagacattc
attccctactacactggccgcatcattgatgtcctcggtgggcactataaccctgatgcc
ttcactgccgccattggcctcatgtgcctgtactccttcatcagctccctggctgtcggc
tgccgtgggggactcttcatgttcaccttctcccgcctcaacatccgcacccggtgccag
ctcttctcttccctggtgcaccaggacctggccttcttccagcaggtcaagacaggcgac
ctgacatcgcgcctctccaaggatgcatccctgatgagccgttcggtgccggccaacgcc
aacatcttcctgcgcagcctggtgaaggcgctggggctctatggcttcatgctgggactg
tcgtggcacctgacgctgcttacgttgctcgagatgcccttcactatggctgcccagaag
atctacgatgcccgctaccaggctgtgctgcaggccatccaggactccatggcctcttct
ggggaggtggcacgcgaggcagtggcctctgtggagactgtgcgcagctttggcactgag
aaggaggaggcacagcgctacgcagcagccctggcccacacccggcgcctcaaggaccgc
cgggacctggagcgggccctctacctgctcttccgaaggctgctgcagctggccatgcag
gtgctgatactgtactgtggccaccagcagatccaggatgggctcatgaccaagggtggt
ctggtctccttcctgctctaccagggtgaagtggggcaatacgtacagaccctggtgtac
atatatggggacctgctgagcaacgtgggagcggcagagaaggtgtttgagtatctggac
cgggtgccagctgtgagcactgacgggacctgggtgcctactatgctgcagggccacatt
gctttccaggatgtctcctttgcctacccctcacgccctgatctcctcgtcctccagggg
gtgtcatttgagctgcggcctggggtggtgacagcactggtggggctgaatggcagcggg
aagagcacctgtgtggcgctgctggagcggttcttcgagccccaagcaggggaggtcctg
ctggatgggaagcccctgcacacctatgagcatcgctacctgcaccgacaggtggtgctg
gtggggcaggagccagtgctcttctccggctccgtgcgggacaacatcacctatgggctg
gagggctgcagcgaggagcaggtgatggctgcggcccgagcagcccatgccaatgagttc
attgacatgctggaccagggcttggagaccgacgtgggagagaagggcgggcagctgtcg
gtggggcagaagcagcggatcgccatcgcccgggccctgatccggcagccgagggtgctg
atcctggacgaagccaccagcgcactggatgtagagagcgaggctgtggtccgtgcagca
gtgctgagcggaggggcccgcacagtaatggtgatcgcccaccgcatggcaacggtggag
ggggctgaccacatcgtggtgctggagggtggtgccgtgaccgagcaggggacacacgct
gagctcatggcacaccagggaccctactaccgcctggtgcagaggcagctcattgagtaa
DBGET
integrated database retrieval system
