Alligator mississippiensis (American alligator): 102563935
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Entry
102563935 CDS
T03087
Symbol
DROSHA
Name
(RefSeq) drosha ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102563935 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102563935 (DROSHA)
03009 Ribosome biogenesis [BR:
amj03009
]
102563935 (DROSHA)
03036 Chromosome and associated proteins [BR:
amj03036
]
102563935 (DROSHA)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
102563935 (DROSHA)
Messenger RNA biogenesis [BR:
amj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
102563935 (DROSHA)
Ribosome biogenesis [BR:
amj03009
]
Eukaryotic type
90S particles
RNase
102563935 (DROSHA)
Prokaryotic type
rRNA processing factors
102563935 (DROSHA)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
102563935 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
YcaO
Cro
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
102563935
NCBI-ProteinID:
XP_006276385
LinkDB
All DBs
Position
Un
AA seq
1338 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGVRNSTQTFRPQNLRQLHPQQPSVQYQYDQQATPPTTYSNPPTT
GYMPPRLDFVPYPPPVPPSAQSPISQCPMRPPFPNHQVRQSFPVPPCFPPAPPPVPNPSN
APVPGAPTGQNAFPYLMPPPAVPHPPPPPVMPQQINYQPVYSTGYSQQSFPPPNFNSYQH
NSNAFQSSSSNNSSSSGSSHFRHTSQYQGDKSQSERRSPERSKHYDEHRHREHGHVHGDR
HRSNNHGDRRDRGRSPDRRRQESSRHRPDYDRGRTPPRHRSYERSRERERERHRHRDSRR
SPSPERSYKKDYKRTGSRSPSRERKRPRWEEDRERWSESQSASKEKSYTNIKDKEPEENI
SEKNEEEDDELLKPVWVRCTHSENYYSSDPMDQVGDSTVVGTSKLRDLYERFEEELGKRQ
AKAKAARPPWEPPKTKLDEDLESSSDSDCDSEDDSSCSSSSDSEVFDVIAEIKRKKAHPD
RLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRI
TVSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMM
PENFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSSCCPRFHFMPRFVRFLPDGGKEV
LSMHQILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQ
LDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQ
KLSQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCL
MHLDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMH
MRKKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGL
ATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGS
LEEAKQLFGRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGV
IFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTL
LRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEY
VHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHAR
TYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMR
WEREHQEREPDETEEARK
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcattctggacgaggatgtccccggggccaaggaggacctggagttagaaat
tcaacacaaaccttcagacctcagaacctgcggcagcttcaccctcagcagccttcagtg
cagtatcaatatgaccagcaagccacccctccaactacctattctaaccctccaaccaca
ggatacatgcctcctaggttggattttgtaccttatcctcccccagtgcccccatcagca
cagagtccaatcagccagtgtcccatgaggccaccttttccaaaccatcaagtgaggcaa
agttttccagtccctccttgttttcctcctgctcctccgccagtgccaaatcccagcaat
gccccagtgcctggagcccccactggacaaaatgcatttccttacctgatgccacctcct
gcagtgccacatcctccaccaccaccagtcatgccacaacaaattaattatcaacccgtc
tactctacaggctactcacagcagtccttcccacctcctaactttaatagctatcaacat
aactctaacgctttccagagcagtagcagcaacaatagcagcagtagtggtagcagccat
ttccggcacacaagtcagtaccagggagataaatcccagagtgaacgaaggtccccagaa
aggagtaagcactatgatgagcaccggcaccgggaacatgggcatgtccatggagacaga
catcggtccaacaaccacggggatcggcgggatcgaggcaggagtcctgatcggcgaaga
caagaaagcagtcggcataggcctgattatgacaggggaaggacaccacctcgccacaga
agttatgaacgtagcagggaacgggaaagggaaaggcataggcatcgggatagccgaaga
tcaccatctccagagaggtcctacaagaaagattataaaagaacagggagccgatccccc
agccgagagagaaagagacctcgttgggaggaggacagagagaggtggtcagaaagccag
agtgctagtaaagagaagagttacaccaatatcaaagacaaagaaccagaggaaaatatt
tcagaaaaaaatgaggaggaagatgatgaattgctcaagcctgtctgggttcgttgtacc
cattcagaaaactactattcaagtgacccgatggatcaagtgggggactccactgtggtt
ggaacaagcaaactccgagatttgtatgaaaggtttgaggaggagttaggaaagcgacag
gcaaaagccaaagcagccaggccaccatgggagccaccaaagaccaaactagatgaagat
ttggagagctccagtgactcagactgtgactctgaagatgacagcagctgttccagcagc
tcagattctgaagtttttgatgtcatcgcagaaattaagcgcaaaaaagctcacccagat
cgtcttcacgaggagctgtggtacaatgatcctggacagatgaatgatggaccactatgt
aagtgtagtgcaaaagcccgacgaacaggaataagacacggcatttatcctggtgaagag
cctattaaaccatgtcgccctatgaccaacaatgctggaagactgtatcactaccgcatt
actgtgtcaccacccacaaatttcttaactgatcgaccaactgttatagaatatgatgac
catgaatatatttttgaaggattttctatgtttgcacatgccccactaacaaatattcct
ctatgtaaagtaattagatttaacattgactatacaattcatttcattgaagagatgatg
cctgagaatttttgtgtgagaggacttgaattattttcctcgtacctgttcaaagatatt
ttggaactctatgactggaatcttaaaggtccttcacttgaaaatgattcttcttgctgt
ccaagatttcatttcatgccacgttttgtgagatttctgccagatggaggcaaagaagtg
ctgtcaatgcatcagattctactttatttgttacgctgcaacaaagctttggtccctgaa
gaggagattgccaacatgcttcagtgggaagaacttgaatggcagaagtatgcagaagaa
tgcaaaggaatgatagttaccagccctggcatgaaacccagctctgttcgtattgatcag
ttggaccgtgagcagttcaatccagatgtgattacttttcctattattgttcactttggg
atacgacctgctcaactcagttatgctggagaccctcagtaccaaaaactatggaagagt
tatgtgaagctgcgtcatttgcttgccaatagccccaaagtcaaacaggctgataaacag
aaattgtcacagagagaggaagcactgcaaaaaatcaggcagaaaaacacaatgagacga
gaagtgactgtggagctgagcagccaaggattctggaaaaccggaattcgttctgatgtc
tgccagcatgcaatgatgcttcctgtccttacccaccatattcgctatcatcaatgtctg
atgcatttggacaaattgataggatacacatttcgagatcgttgcttgctacagcttgcc
atgactcacccaagccatcacttaaactttggaatgaatccagaccatgcaagaaattcg
ttatccaactgtggaattcgacagcccaagtatggagaccgaaaagtccatcacatgcac
atgagaaaaaaaggaataaataccttgataaatattatgtcacgtcttgggcaagacgac
ccagccccttctaggattaaccacaacgagcgtctagaatttctgggagatgctgtagta
gaattcttaacgagtgttcatctgtactatctatttccaactctagaggaaggaggacta
gctacgtatcgcactgccatcgttcagaatcagcatcttgctatgttggctaagaagctg
gaactggaccggtttatgctttatgctcatggacctgacctttgcagggaatcagacctc
cgccatgcaatggcaaactgttttgaagccttgataggtgctgtttacctagaaggaagc
ctagaagaagccaaacaattatttgggcgtttactgtttaatgataaggacctgcgggat
gtatggcttaattatcctctacacccactccaactgcaagaatccaacactgaccgacag
ctcattgagacatctccagttctccagaaactaacagagtttgaggaagcaattggagtt
atttttactcatgttcggcttctagcacgtgccttcaccttgagaactgtggggtttaac
catctgactctaggccacaatcagaggatggaattcctgggtgactccataatgcaattg
gtagccacagagtacttattcatacatttccctgatcatcatgaagggcacttaacgctg
ttgcgaagctccttggtgaacaacaggacacaggctaaagtagcagaagagctgggtatg
caggaatttgccatcactaatgacaagaccaagaggcctgtggctcttcggactaagact
ttggccgatctcttggaatcctttattgctgcactttacattgataaggatttggaatat
gttcatactttcatgaacgtgtgcttttttccacggttaaaggagttcattttaaatcag
gattggaatgacccaaaatcccagcttcagcaatgctgcctcactctcagaacagaagga
aaagagccagatattcctttatacaagactctgcagacagtgggaccttctcatgccagg
acatacacggtggctgtttatttcaaaggagaacgaataggatgtggtaaaggcccaagt
attcaacaagcagaaatgggagctgcaatggatgcacttgaaaaatataactttccccag
atggcccatcagaaacggttcattgaacggaaatacagacaagagttgaaagaaatgagg
tgggaaagagagcatcaagagagagagccagatgagactgaagaagccaggaaataa
DBGET
integrated database retrieval system
