Alligator mississippiensis (American alligator): 102563990
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Entry
102563990 CDS
T03087
Symbol
FEN1
Name
(RefSeq) flap structure-specific endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03030
DNA replication
amj03410
Base excision repair
amj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102563990 (FEN1)
03410 Base excision repair
102563990 (FEN1)
03450 Non-homologous end-joining
102563990 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amj03032
]
102563990 (FEN1)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102563990 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102563990 (FEN1)
DNA replication proteins [BR:
amj03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
102563990 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
102563990 (FEN1)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
102563990 (FEN1)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102563990 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
102563990
NCBI-ProteinID:
XP_006270608
UniProt:
A0A151NYH3
LinkDB
All DBs
Position
Un
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADVVPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGADVLHNEEGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQEAGEE
ENVEKFSKRLVKVTKQHNDECKKLLSLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLNRILQELDLTWEQFVDLCILLGCDYCESIRG
IGPKRAIELIKQHKTIEKIVEHIDTKKYPLPENWLHKEAQHLFLQPDVVDPEAVELKWGE
PDEDGLVQFMCGEKQFNEERIRNGIKRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPEP
KGPTKKKAKGNAAAKFRKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccatggcctggccaagctgattgcggacgtggttcccagtgccatccgggag
aatgacatcaagagttactttgggcggaaggtggccattgacgcctccatgagcatctac
cagttcttgattgccgtgcgccagggggctgatgtgctgcacaacgaggagggcgagact
accagccacctgatgggcatgttctatcgcaccatccgcatggtggagaacggcatcaag
ccggtctacgtctttgatggcaagcccccccagctgaagtcaggggaactggccaagcgg
agtgagcgccgtgctgaggcggagaagcagctgcaggaggcccaggaggcaggtgaggag
gagaatgttgagaagttcagcaagagattggtcaaggtaaccaagcagcataacgatgaa
tgcaagaagctgctgtcattgatgggcatcccttatgtggaagcaccgggcgaggctgaa
gccagctgtgccaccttggtgaaagctggcaaagtctatgcagctgccactgaggatatg
gactgcctgacctttggcagtccggtgctcatgcgacacctcacagctagcgaggccaag
aaactgcctatccaagaattccacctgaaccgcatcctgcaggagctggacctgacgtgg
gagcagtttgtggacctgtgcattctcctgggctgtgactactgtgagagcatccgtggt
attgggcccaagcgtgccattgagctcatcaagcaacataaaaccattgagaagatcgtg
gagcacatagacaccaagaagtacccgcttcctgagaactggctgcacaaggaagcccaa
cacctctttttgcagcctgatgtggtagaccctgaggctgtggagttaaagtggggtgag
cctgatgaagatggtcttgtccagtttatgtgtggggagaagcagttcaatgaagaacgg
atccgcaatgggatcaagaggttgagcaagagccgccaaggtagcactcagggccgattg
gatgacttcttcaaggtgactggctccattacttcagctaagcgaaaggagccagagccc
aagggaccaaccaagaagaaagcaaagggcaatgctgcagcaaagttcagaaaggggaaa
tag
DBGET
integrated database retrieval system
