Alligator mississippiensis (American alligator): 102564166
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Entry
102564166 CDS
T03087
Symbol
CDX1
Name
(RefSeq) caudal type homeobox 1
KO
K09312
homeobox protein CDX1/4
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102564166 (CDX1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
102564166 (CDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
102564166
NCBI-ProteinID:
XP_019333888
LinkDB
All DBs
Position
Un
AA seq
252 aa
AA seq
DB search
MYVGYLLDKDSAMYPSPARPPSLSLSPQSYAPAPPQYPDFASYHHVPGIPGDPQHSQPAG
AWGSPYAPSKDDWHSYGPSAASPAQLGFGPPDFNPLQPPGSGLLPPPMPQLSPGSQRRTP
FEWMRRSTPSGSSGGSGKTRTKDKYRVVYSDHQRLELEKEFHFSRYITIRRKAELAAALG
LTERQVKIWFQNRRAKERKVNKKKMQQQTQPASTTTPTPPAVGTPGPIAGICSSTTGLIS
SSPLAIKEEFLP
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgggctacctcttggataaggactctgccatgtaccccagccctgctcggcca
cccagcctaagcctgagcccgcagagctacgcgcccgcgcccccccagtacccggacttc
gccagctaccaccatgtgccggggatccccggagacccccagcacagccagcctgcgggc
gcctggggctctccctatgcacccagcaaggacgactggcattcgtacgggccctcggcc
gccagtccggcgcagctgggcttcggccccccggatttcaaccccctgcagcctcccggc
tccggactcctcccgccgcccatgccgcagctgtcccccggctcgcagaggcgcacgccc
ttcgagtggatgaggcgcagcacccccagtggcagcagtggcggatctggcaagacccga
acgaaagacaagtaccgcgtggtgtactcggaccaccagcgcttggagctggagaaggag
tttcatttcagccgctacatcaccatccggcgcaaggcagagctggcggctgccttgggg
ctcaccgaacggcaggtgaaaatctggttccagaaccggcgagccaaggagaggaaagtg
aacaagaagaagatgcagcagcaaacgcagcccgccagcaccacgacgcccaccccgccg
gcggtcggcaccccgggccccatcgccggcatctgcagcagcaccaccggcctgatctcg
tcgtcgccgttggctatcaaggaagagttcctgccttaa
DBGET
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