Alligator mississippiensis (American alligator): 102564247
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Entry
102564247 CDS
T03087
Symbol
DHX35
Name
(RefSeq) DEAH-box helicase 35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amj03041
]
102564247 (DHX35)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102564247 (DHX35)
Spliceosome [BR:
amj03041
]
Complex C
Other components
Complex C specific factors
102564247 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
AAA_30
nSTAND3
AAA_7
Cas3-like_C_2
UPF0203
Motif
Other DBs
NCBI-GeneID:
102564247
NCBI-ProteinID:
XP_006258083
UniProt:
A0A151NZ95
LinkDB
All DBs
Position
Un
AA seq
703 aa
AA seq
DB search
MAAPAGPGKFWKPGTEGPGVSISEERQSTSEINGVNIIYNPYASLSIEQQRQKLPIFKLR
NHILYLVENYQTLVIVGETGCGKTTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
AEERGAMLGHDVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPSKDTSVILTVEG
RTFPVDVFYIQSPVPDYVKSTVETVMKIHQLESDGDILAFLTGQEEVETVVSMLIEQARA
LSRTGMKKHLRVLPLYAGLPSSEQMKVFERVSHSVRKVIVATNIAETSITIHGISSVIDC
GFMKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPQSTVP
EMQRSNLSPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDKHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVLPPNQKAQATRQHRKFAV
EEGDHLTMLNVYEAFIKHSKSSQWCQEHFLNYKGLVRATIVREQLKKLLVKFKVPKKSSE
GDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQ
TSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLRAKRVKVDDH
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgcgggcccggggaagttctggaagccgggcacagaaggtcctggtgtc
agcatctcagaggagagacagagcacttctgaaattaacggtgtaaacatcatctataat
ccttatgcttccctttctattgaacaacagagacaaaagttgccaatttttaagcttaga
aatcacatactgtacctggtggaaaactatcagactctggtgattgttggagaaacagga
tgtggcaaaaccacccagattccacaatacttagcagaagctggctggacggccgaaggg
agggtagttggagtgactcagcctcgcagagttgctgctgtttcagttgcaggccgagtg
gctgaggaaagaggcgctatgctgggtcatgacgttggatattgtattcgtttcgatgat
tgcacagaccctcaggctacaagaattaagtttctgacagatggtatgttggtgagggag
atgatggccgacccattactaacaagatacagtgtcctcatgctggatgaagctcatgaa
agaaccctgtatacagacattgccatcggcttattaaaaaagattcaaaagaaacgaggc
gatctgcgactgattgtagcatcagctaccctggatgcagagaaatttagagatttcttc
aatcaaaatgagactagtgaccccagcaaggataccagcgtgattcttaccgtggaaggg
agaacttttccagtggatgtcttttatatacagagccctgttccagattatgtcaaatca
actgtagaaacagtgatgaaaattcaccagttggagagtgatggggatatattggccttt
ctaactggccaggaggaagtagaaactgtcgtttctatgctgatagaacaggctcgagcc
ctttctcgtactgggatgaagaaacacctccgtgttctccctttgtatgctgggcttcct
tcctctgagcagatgaaagtatttgagagggtttcacacagtgtcagaaaggtgattgtg
gccaccaatattgctgagacatccattacgattcatggaatctcatctgtgattgactgt
ggctttatgaagcttcgggcctataatcccaaaacagccattgaatgccttgtagttgtt
ccagtgtcaaaggcatcagctaatcagagagcagggcgtgcaggccgaaaccgctctgga
aaatgttataggctttacacagaggaagattttgagaagttgccacagtccactgttcca
gaaatgcagcggagtaacctgtcacctgtcatattgcaattgaaagctttgggaattgac
aatgtgctcaggttccccttcctctctccaccccctgcacaatcaatggtgcaagctttg
gaattgctgtatgctttaggaggtttggataaacactgtcgtctaacagaacctcttggt
atgagaatagcagagtttcctttgaaccctatgtttgcaaagatgctgctggaatcagga
aattttggctgctcccaggaaatcttgagtattgctgccatgatgcagattcagaatgtg
tttgtgctccctccaaaccaaaaagcacaagctacaaggcaacacagaaaatttgctgtg
gaagaaggcgatcatctcactatgctaaatgtttatgaagcttttattaaacacagcaag
agttctcagtggtgtcaggagcactttctaaactacaaagggcttgtcagagcaacaatt
gtgagagagcagctgaaaaagcttcttgtcaaatttaaagtaccgaagaaatccagtgaa
ggtgacccagatcccgttttgagatgtatagtttctggattctttgctaatgcagccaaa
ttccactccacgggagcttataggaccatccgtgacgaccacgaactgcacattcatccc
acctcagtgctgtatgcagagaaacctcctcgctgggtagtctacaatgaggtcatacag
acctccaagtactacatgagagatgtgactgctattgaatctgcttggttattggaactg
gcacctcacttttaccaacaaggaacgcatctttccttgagggcaaaaagagttaaagtg
gatgaccattga
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