Alligator mississippiensis (American alligator): 102564262
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Entry
102564262 CDS
T03087
Symbol
EIF4A3
Name
(RefSeq) eukaryotic translation initiation factor 4A3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
amj03015
mRNA surveillance pathway
amj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102564262 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
102564262 (EIF4A3)
03015 mRNA surveillance pathway
102564262 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102564262 (EIF4A3)
03041 Spliceosome [BR:
amj03041
]
102564262 (EIF4A3)
03009 Ribosome biogenesis [BR:
amj03009
]
102564262 (EIF4A3)
03012 Translation factors [BR:
amj03012
]
102564262 (EIF4A3)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102564262 (EIF4A3)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102564262 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
102564262 (EIF4A3)
Spliceosome [BR:
amj03041
]
Complex C
Other components
EJC/TREX
102564262 (EIF4A3)
Ribosome biogenesis [BR:
amj03009
]
Eukaryotic type
90S particles
Helicases
102564262 (EIF4A3)
Translation factors [BR:
amj03012
]
Eukaryotic type
Initiation factors
eIF-4
102564262 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
102564262
NCBI-ProteinID:
XP_006259308
UniProt:
A0A151M1I6
LinkDB
All DBs
Position
Un
AA seq
409 aa
AA seq
DB search
MSGAAGSAGSARKRLMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPS
AIQQRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAVQI
QKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIK
MLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANF
TVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYI
HRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggcggcgggctcggcgggctcggcccgcaagcggctgatgaaggaggaagac
atgaccaaggtggagttcgagaccagcgaggaggtggacgtcacgccgaccttcgacacc
atggggctgcgcgaggacctgctgcgcggcatctacgcctatggttttgagaagccatcg
gcgatccaacagagagcaatcaaacagatcattaaaggaagagatgtgattgcacagtca
cagtctggaacaggaaaaacggcaacattttgtatctcggttctgcagtgtctggatatt
caggttcgggaaacccaggcattgattcttgcgccaacgagggagctggctgtacagata
cagaagggtcttcttgctctgggtgactacatgaacgtgcagtgtcatgcctgtatcgga
gggacaaatgttggtgaagacatccgaaaactggattacgggcaacatgtcgttgctggc
accccaggccgtgtgtttgatatgatccgtcgccgaagcttgaggacgcgggccatcaaa
atgttggttttggatgaagcggatgagatgctcaataaaggcttcaaggagcagatttac
gatgtgtaccgatacctgcctcccgctacacaggtggttctcatcagtgctaccttgccc
catgagatcctggagatgaccaataagttcatgacggaccctattcgtatcctagttaaa
cgtgatgaactgactctagaaggaatcaagcagttttttgtcgctgtggagagggaagaa
tggaagtttgacacgctgtgtgatctgtatgatacgctcaccatcacgcaagctgtcatc
ttctgtaataccaagaggaaggtggactggctaacggagaagatgagagaagcgaatttc
acagtctcatccatgcatggagacatgccacagaaagagagagaatccattatgaaggag
ttcagatctggtgccagccgagttcttatatctacagacgtttgggcccggggtctggat
gttcctcaggtatccttgatcattaactacgatttgcctaataacagagaactctatata
cacagaatcggcagatcaggtcggtatggccgcaaaggcgtggccatcaactttgtgaag
aatgatgacattcgtatcctgcgtgacattgagcagtactactccactcagatagatgaa
atgcccatgaatgttgctgatctcatttaa
DBGET
integrated database retrieval system
