Alligator mississippiensis (American alligator): 102564265
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Entry
102564265 CDS
T03087
Symbol
EXOSC1
Name
(RefSeq) exosome component 1
KO
K07573
exosome complex component CSL4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102564265 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102564265 (EXOSC1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102564265 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102564265 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
102564265
NCBI-ProteinID:
XP_019352571
LinkDB
All DBs
Position
Un
AA seq
179 aa
AA seq
DB search
SGAGAAWAVAALGAGAVSASGSKLTGHVPPAWQLPVVSVVRDAEAQLLPDVGAIVTCKVC
SINSRFAKVHILYVGSTPLKSAFRGTIRKEDIRATERDKVEVYKSFRPGDIVLAKVISLG
DVQSNYLLSTAENELGVVVAHGEAGARLVPISWCEMQCPRTHTKEFRKVARVQPQFLQT
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
agtggtgcaggagccgcatgggctgtggctgcgctgggcgctggggctgtctccgcgagc
ggctccaagctcacggggcacgtccctcctgcctggcagctgcccgtggtgtccgtggtg
cgagacgccgaagcccagctcctgcctgacgtgggcgccatcgtcacctgcaaggtgtgc
agtattaactcccgcttcgccaaggtgcacatcctgtacgttggctccacgcccctcaag
tcagctttccgcggcaccatccggaaagaagacatccgagccacggagcgggacaaggtg
gaggtttacaagagtttccgcccaggggacatcgttctggctaaggtgatctcgctgggt
gacgtgcagtccaactacctgctgagcacggccgagaacgagctgggcgtggtggtggcc
cacggcgaggcaggggcacggctggtgcccatcagctggtgtgagatgcagtgtccccgg
acgcataccaaggagttccgcaaagtggcccgtgtgcagccccagttcctgcagacctag
DBGET
integrated database retrieval system
