Alligator mississippiensis (American alligator): 102564393
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Entry
102564393 CDS
T03087
Symbol
CFAP46, TTC40
Name
(RefSeq) cilia and flagella associated protein 46
KO
K24938
cilia- and flagella-associated protein 46
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102564393 (CFAP46)
Cilium and associated proteins [BR:
amj03037
]
Motile cilia and associated proteins
Sperm associated proteins
102564393 (CFAP46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_CFAP46_N
TPR_12
TPR_8
MIT
DUF1003
Motif
Other DBs
NCBI-GeneID:
102564393
NCBI-ProteinID:
XP_019339730
LinkDB
All DBs
Position
Un
AA seq
2666 aa
AA seq
DB search
MDSALRLQLLSAPARPDSEALKNAYEMIKSANQGKSALDSSESFSSDLYVLCAEQALELG
YLEISSDCLQMYFKGRYPVNQFIGRAYLCQGQLFTPLSTENLENFEKFVMFFMKAVDFAI
NDPRYYFLIYNASVLYWNFISPYLKPGFRCHLISSLYQIVAALNQVGEQDKEWRAELMIE
LLECYLDASKMKEAVNFSSIAAAFIKDNAPDKYQQIFSLMVRHKLMNTSQIEGNIRNSIS
LSAIYKIQTIKSQLDANEFPREATANLSAVYELLKQYDTESASFILGEKIPLLLELARLS
LKLNCIEVAFDCIHDLKRAQISDPGKLIEIECLECEYEVQKLGRKISSYTKGAVETQLKV
IRRLELALQHAVRVGDPNVVQAVCATQWNLCLPLLQHNLLQHVKKPLISVADILEKIDSS
LILLRCQVHMEIARIEENGDRIEAAMEHLKKAIYLDNNGQYQEHLKMAFNRLHLCTMLYK
SPERLEDQAIMMIEQAKKGKLKDSVRKKRSLLVNAGLALAPDAFQIVLDSENEAQVSSGK
SRSKISYLHAKAQHHIKSVEKADGHLKRLGHRNDKERVSLWADLAKVARKQEVWDVCRTA
CRFCLLYDDTQLKKVPKSMKAQKKKPSIIMMDDNQGDSLQLESSLPLKSFSFEKDLLRTL
AEIRFINAEAIIHLLRLQGVQLNDHADLPQDTSQHSPGYLAKLPEQDQEWITYSLWIDHL
SQYAMENFLRAAEIGEELNEAWIVHNTVVYVLNYNKHLIASGRQREIVESLQTLLSAVKN
TGHCGNIVVLLMLCNALARGLILFWIPKPIVKFDEKKNIDTATSDNKRTATKGPEKTNLV
QSLPMDPNRYSDIKAAIEVCEFALSLINGNASNEVPISVQQQVIAAWVKAKQLHQQQIGQ
KLGTDDENNDEGQNPISKVLVALEMYSCNGLGLMDFTVPSLAQLVRMTLKCSWSDPLVEL
QTLTRLTYFAYVSHDHEIVMMCSQRIMQFDDIFLSSTDGKKCEIHEYTAGQELLSTAACI
QGKSIMENLSGRHYLRLSASKAFVQSARYAGEAGNCSLVMLAARHFWNTCLPFIGSPRDR
EQLKEPTEIILKSIIKAESKTKQEKENTLPLHQWITKDFQTTGSSDGDFLPGTEEDLTLR
TSLYGLLFHVHDDKGDWETGLKVLEEAIQVLPRTKHRLLIFKHMVIVKTRLGCNFMMDIQ
KFREESEDYLSNMWHHLASVSKDLVGQLTCYQNAIEVLQKKESQWQKVHYLMEFSEWLYY
NQFPLDDVIKHLDWAINILLHMKFATKPLEEGEKNLIKETPSSELMIDLGKKNTIPQVAF
QDLQNIRQLENLFRAYTLIAIISGRSSPYHQQHCLMAYACIIRIWQVSLSAAGSVIKVLA
KPSQTAAFQNVQPNTLKKDKGNKDTKQVESTTPKKGKAKKDTKQAQASVTKDKPKQKGPV
DTLPASVEEWATYDCPDEVRDAFKQEASSCGINQDNIRVPTYTLYFMDLLAKELQKTFCT
HLILPIFQLAEVIAHEVLESKSLSDLYRLRIALICSDMKLNQASSYHEKAVGEAYINEVE
QAMCRQEIALEKEHNVPPKEDEISESFEHTKPDESPCSNSVTAKILKINAATGKGLSGLS
FPYLWIDKAEVLIQLGLYQPARLLLAEAHSATQELNDGCAVSRCLYLLAVLANLEKNYGQ
AKALLEKAQNIGGKEWFWYNSTLSLIEAVLGKDEEEKEEVICRILQKNINVFRSILVERP
NRESELGFMITSLEARKTIIQINFAQDYMKINAESSQLTSILQLYEKLIQIEDDFHRYGY
KDHSAEILQERANIHRLIAKYTRDEEEKHHHYLDAYTLTQRAVSEKEELFHNVCSLLSVQ
EIKNISIPLMRQLANMKLRLVEIILDILHLVNTEKKLKELREGSLTKIVEEFVRLTPHSA
SVEQGWINMRQTVGHIALAHLVSLQSLYAGCPDIKAKHLYLTGKTLHLLAVKADPLHSDT
CWKENIMEETKLNSMKPPMIECNENKMARSSSPSNKKQFEEQKKKANELKKRLILAKKYL
SQSSEVLLQCMNVAFSNNIINILTSASLEMVECLGRFDPVSSSQFLALHQSCSASLMMKD
ILLAATPDTMSSQLAALLHFQHHLKQKGDISSLSKNVEQRLASTSKAWENLCVPAQHFNI
VNELPPNFHIVILQHSEDGSSLYSAIIKKPKFSSGQQKGKPIHPTVQAKVSRISVNPDTL
LILLEKVRLYKQERMNSFFKQELPKKLHTGKVYFQNWQESSTEIEMDLTEKINENERKLT
SDFCEILKDMEEYLQPVLSQFDSSDFREQSQTASPAESGKTKAKDKEVKHTAPEDTPMDL
GESLILLADKLLMELPLEALSIFQEEAICSISRDFSLQLLYNRIHIEEPENEVKKDVKSS
KEPKPKANQKKSIKIVPVNRVLPPNCMPVDMNNFKYIVDPYNETKETEAISPSKKIREIL
QKYQEQFTSHWEGVIGSIRVPSQAEWEQLLSKSSAFLFYGMERVLSHILLDRLVAMNIPE
CQLMILLDLMQSTQSSQRLTKTDIHRSSRQKSLERPTETAILLSLTGVRSIIANQWYTSL
EGNAENLETLSENLLRVGKSTGQTVRILQKNKTREKVPSINVEEDYGISSRNRIENQIIP
NQSQSPAIQPSSFNCVLYGLPNLIVM
NT seq
8001 nt
NT seq
+upstream
nt +downstream
nt
atggactcggcgctgcggctgcagctgctctcggcgccggcccgcccagacagcgaagct
ttgaagaatgcttacgaaatgatcaaatctgccaatcaaggaaagtctgcactcgattcc
tcggagagcttcagctctgatttgtatgtgctgtgtgcagaacaagcgctcgagctgggt
tatctagaaatcagcagcgactgtctacagatgtattttaaaggaagatatcctgttaat
cagtttattggtagagcatacttgtgccaaggccagctgttcaccccactttctactgaa
aatttggaaaattttgagaagtttgtgatgttctttatgaaagcagtagactttgccata
aatgatccaagatactattttttgatatacaatgcctcagtcctttactggaatttcata
agtccatatcttaagcctggattccgctgccaccttatttccagtctgtatcagattgta
gctgcgttaaatcaagttggagagcaagacaaggagtggagagctgaactcatgatagag
ctacttgaatgctatctggatgcttcaaaaatgaaagaagcagtgaatttttcatctatt
gcagcagcattcattaaagataatgctccagataaataccaacagatattttctttaatg
gtgcgtcacaaactaatgaacacctcccagatagagggaaacatacgaaacagtatcagt
ttatctgccatttataaaatccagacaataaaatcacagttggatgcaaatgagtttcca
agagaagccactgcaaatctgagtgctgtgtatgaacttttgaaacagtatgatacagaa
tctgcaagtttcatccttggtgaaaagattcctttgctcctggaattggctcgtctttct
ttgaagttaaactgcatcgaagttgcatttgattgcatacatgatctaaagagagctcaa
attagtgatccaggaaaactaattgaaatagaatgcctggagtgtgaatatgaagtccaa
aaacttggcaggaaaatctcaagctatacaaaaggtgctgttgagactcagctgaaagtg
ataagaagacttgaactagctttgcaacatgcagttcgagtgggagaccccaatgttgtt
caggctgtttgtgcaactcagtggaatctttgcctaccactgttacaacacaacttgctt
caacatgtaaaaaaaccattgatttctgtggctgatatcctagaaaagattgacagctct
ttgattttgttacgttgccaagttcatatggaaattgctcgcattgaagaaaatggagat
agaatagaggctgccatggaacatttgaagaaggctatatatctggataacaatggacaa
tatcaagaacatcttaaaatggctttcaatcgtcttcatttatgcactatgttgtacaaa
tcacctgaacgcctagaggatcaagcaattatgatgattgaacaggctaaaaaggggaag
ctgaaagacagtgtgaggaaaaagcggtctcttctggtaaatgcaggtcttgcactagct
cctgatgcatttcaaatagtccttgatagtgaaaatgaagcccaagtttcctccggtaaa
agtaggagtaaaataagttatctccatgcaaaagcacagcatcatattaaaagtgtggag
aaagctgatggacatctgaaacgattaggacatagaaatgacaaagaaagagtcagtctt
tgggcagatctggcaaaagttgctcggaaacaagaggtctgggatgtgtgccggactgca
tgtagattctgtctcttatatgatgatactcagttgaagaaagtaccaaaatctatgaag
gctcaaaagaagaaacctagtataattatgatggatgataatcagggtgacagcttgcaa
ttggaatcatctttgcctcttaaatcattctcttttgaaaaagacttacttagaacatta
gcagaaataaggttcattaatgcagaggcaattattcatttattaagattacaaggtgtt
caactcaatgatcatgctgacctgcctcaggatacaagccagcattccccaggatacctt
gcaaaacttcctgaacaggatcaagaatggataacatacagtttgtggatagaccactta
tcccaatatgcaatggaaaactttctgcgtgctgcagagataggagaggagttaaatgaa
gcctggattgttcataacaccgtggtgtatgtcttaaattacaataagcatcttatagcc
tcaggaagacagagagagattgttgaatctctgcagactcttctgagtgcagtcaagaat
actggtcactgtgggaatattgttgttttacttatgttatgtaatgctttggctcgaggc
ctaattcttttctggattccaaaaccaattgtgaaatttgatgaaaagaaaaatatagat
acagcaacgagtgataataaaaggactgcaacaaaaggacctgaaaaaacaaaccttgtc
cagtctttgccaatggatcccaatagatattctgatatcaaagcagcaatagaggtttgt
gaatttgccttaagtctgataaatggaaatgcatctaatgaagtaccaatttctgtacaa
cagcaagtcattgctgcctgggtaaaagcaaaacaattacatcagcaacagattgggcag
aaacttggaactgatgatgagaataacgacgaggggcaaaatcctatctcaaaagttctt
gttgctttggaaatgtactcatgtaatggcttgggtctcatggacttcactgttcccagt
ttggctcagctggtgagaatgactttaaaatgcagctggtcagatccactagtggagttg
caaacgttgacacgacttacgtattttgcatatgtgtcacatgatcatgaaatagtgatg
atgtgttcccaaaggattatgcagtttgatgatatatttttgagcagcacagatgggaag
aaatgtgaaatacatgaatacacagcagggcaagaattgttaagtacagctgcttgtata
caagggaagagtataatggaaaatttgtctggaagacattatttgcgcttatcagcatca
aaagcctttgttcaaagtgcacgatatgcaggagaagcaggaaactgtagccttgtaatg
ttggcagctaggcatttctggaacacgtgtttaccttttataggttctccacgtgacaga
gaacaacttaaagaacccacagaaataattctcaagagcatcattaaagcagaatctaaa
actaagcaagaaaaagaaaatacattacctttgcatcagtggattacaaaggattttcag
actactggatcatcagatggtgactttctcccaggtactgaggaggatctgacattaaga
acatccctctatgggttgttattccatgtgcatgatgataaaggagattgggaaacagga
ctaaaagtattggaggaagctattcaggttctgcctcgaactaagcatagactgctgatt
ttcaaacatatggttattgtaaagacaagacttggatgtaattttatgatggacattcag
aaattcagagaagaaagtgaggattatttgtcaaatatgtggcatcacctggcatcagtg
tccaaagaccttgttgggcagttaacctgctatcaaaatgcaattgaagttttacagaaa
aaagaaagtcagtggcaaaaagtgcattacctgatggaattttctgaatggttatactac
aatcagtttcctcttgatgatgttattaaacacctggattgggcaataaatatcttgcta
catatgaaatttgccacaaaacctcttgaagaaggtgaaaaaaacctcataaaagaaact
ccatcatcagagctgatgatagaccttgggaaaaaaaatacaattccccaagtggctttt
caagatctacaaaatataaggcaactggaaaatttatttagagcctataccttaatagct
ataatttctggccgtagttcaccttatcaccaacaacactgtttgatggcatatgcttgt
atcattcgtatctggcaggtttccctgtcagcagcaggatctgttataaaagtattagca
aagccatcacaaacagctgcttttcagaatgtccagccaaacactcttaagaaagataaa
ggcaataaagatacaaaacaagtggaatccaccacccccaaaaaaggcaaagctaaaaag
gataccaaacaggcacaagcttcagttacaaaagacaaacctaaacagaaaggaccagtc
gataccttaccagcgagtgtggaggaatgggctacctatgattgtcctgatgaagttaga
gatgcttttaaacaggaagcaagctcttgtggtattaaccaggataacattcgggtacct
acttacacattatattttatggaccttttggctaaggagctgcagaagactttttgcacc
catttgattcttcccatctttcagcttgctgaggttattgctcatgaagttctggaaagt
aaaagtctttctgatctctatcgtctccgaattgccctgatatgttcggatatgaagttg
aatcaggcatcttcatatcatgagaaggcagttggagaagcatatatcaatgaagtggaa
caagcaatgtgtagacaagagattgcactggaaaaggaacataatgtaccaccaaaggaa
gatgaaataagtgaatcatttgaacataccaaaccagatgaaagcccctgcagcaactca
gttacagcaaagattttaaagataaatgcggcaactggaaaagggctgagtggactttct
tttccatatctctggattgacaaagctgaagtactcattcaactgggcttgtatcagcca
gcaaggctgctgcttgcagaggcacacagtgcaactcaggagctgaatgatggttgtgct
gtgtcaaggtgcttatatctacttgctgtactggctaacctagaaaagaactatgggcaa
gcaaaggcactgcttgagaaagcacagaacataggaggaaaggaatggttttggtacaat
agcactctgagtctcatagaggcagttctagggaaagatgaggaagaaaaagaggaagtg
atttgcagaattttgcaaaaaaacataaatgtgttcagatccatattagtggagagacct
aacagagagtctgaactgggttttatgattacctccctggaagcaaggaaaacaattatt
caaataaattttgcccaagattacatgaaaattaatgccgagtcttctcagttaacaagt
atactacaattgtatgagaaattaattcaaattgaggatgacttccatcgttatggatat
aaagaccacagcgctgaaatcctacaagaacgtgcaaatattcacaggttgattgcaaaa
tacacaagagatgaagaagaaaaacatcatcactatctagatgcctacacattaactcag
agagcagtgtctgaaaaagaggaactatttcacaatgtttgtagcttactttctgttcag
gagataaaaaatatcagtattccattaatgagacaacttgctaacatgaagctaagactt
gtggaaataattttggatattcttcatcttgtgaatacagaaaaaaagctgaaagaactg
agagagggatcacttactaaaattgttgaagaatttgttaggttaacacctcatagtgcc
tctgtggaacagggatggataaatatgaggcagactgtggggcacattgcactggctcac
ttagtaagcctacagagtctttatgcaggctgtcctgacatcaaagccaaacacctttat
ctcactgggaaaactctgcatttacttgctgttaaagcggaccccctacactcagatact
tgctggaaggaaaatattatggaagaaactaaattgaacagcatgaagcctcccatgata
gagtgcaatgaaaacaaaatggcaaggagcagttcacctagtaataaaaagcagtttgag
gagcagaagaagaaagcaaatgagttaaagaagagactgattttggccaagaaatacttg
tctcaatccagcgaggttttactacagtgcatgaatgttgcattcagtaataacattatc
aacatactgacttctgctagtcttgaaatggttgaatgtcttggacgatttgatccagtt
tcaagtagccagttcttggctctgcatcagagctgttcagcatctctaatgatgaaggat
atcctgctagcagccactcctgacacaatgagttctcaactggcagcactattgcatttt
cagcatcacttaaaacaaaagggagatataagtagcctttccaaaaatgtggagcagagg
ctagcttctacctcaaaggcatgggaaaatctctgtgttcctgcacagcattttaacatt
gtgaatgaattgccaccaaacttccacatagtcattctccagcattcagaagatggatca
agcctatatagtgcaataattaagaagccaaaatttagcagtggacaacagaagggaaaa
cccattcatccaacagtgcaggctaaagtttctcgtatttctgtgaatcctgatacactc
ttgattttgttggagaaagtacgtctttacaagcaggaaaggatgaatagtttctttaaa
caggagttgccaaaaaaattgcatactgggaaggtttattttcaaaattggcaagaaagt
tctacagaaatagaaatggatctaacagaaaagataaatgaaaatgagagaaaacttaca
tcagatttctgtgaaattttaaaagacatggaagaatatctgcagccagtgctgtcacag
tttgatagttctgatttcagggagcagagccaaacagcttcaccagctgaatcaggaaaa
acaaaagccaaggataaggaggtgaaacatactgcaccagaggatacacctatggattta
ggagagtctttaatattactagcagacaaattacttatggagctacctttggaagctctg
agtatctttcaagaggaggcaatatgttctatatccagagacttttctctccaacttctc
tacaatcgaatacatatagaggaaccagagaatgaagtaaaaaaagatgttaaaagttca
aaggagccaaagccaaaagcaaatcagaaaaagagcataaaaatagtgccagttaatcgt
gttttacctcctaattgcatgcctgtggatatgaataattttaaatatattgtggatccg
tataatgaaacaaaagaaacagaagcaataagtccttctaaaaaaataagggaaatccta
caaaaataccaggagcaatttacatctcattgggaaggtgttattggtagcattcgtgtt
ccaagtcaagctgaatgggagcagctactgagtaaaagcagtgcatttctgttctatggg
atggagagagttttatctcatatattacttgacagattggttgctatgaatatcccagaa
tgccagttgatgatacttttagatctgatgcagtcaactcagagttctcaacgactgaca
aagactgatatacacagaagctctcgacagaagtctttagagagaccaacagagacagca
atccttttgagccttactggtgtgcgttccatcatagctaaccagtggtacactagcctg
gaagggaatgcagaaaacctggaaactttatctgagaatttgttacgagttggaaaatca
actgggcagacagttcggattcttcaaaagaataagactagagagaaggtgccatcaatt
aatgtggaagaagattatgggatttcttctagaaacagaatagaaaaccaaatcattccc
aatcagtcgcaatctcctgcaattcagccatcatcttttaattgtgtattatatgggcta
cccaacctaattgttatgtaa
DBGET
integrated database retrieval system
