Alligator mississippiensis (American alligator): 102564467
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Entry
102564467 CDS
T03087
Symbol
VCP
Name
(RefSeq) valosin containing protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04137
Mitophagy - animal
amj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102564467 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102564467 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102564467 (VCP)
03009 Ribosome biogenesis [BR:
amj03009
]
102564467 (VCP)
04131 Membrane trafficking [BR:
amj04131
]
102564467 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102564467 (VCP)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102564467 (VCP)
Ribosome biogenesis [BR:
amj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102564467 (VCP)
Membrane trafficking [BR:
amj04131
]
SNARE
SNARE associated proteins
Others
102564467 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102564467 (VCP)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102564467 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
102564467
NCBI-ProteinID:
XP_014460872
LinkDB
All DBs
Position
Un
AA seq
806 aa
AA seq
DB search
MASGSDSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattctaaaggagatgacttatcaactgcaattctgaagcagaag
aacaggcccaatcggttaattgtcgatgaagccatcaatgaggacaacagcgttgtatcg
ctgtcccaggcaaaaatggatgaattgcaactgttcagaggagacactgttttgttaaaa
ggaaagaagaggagagaggcagtctgcattgtcctgtcagatgatacctgctcagatgag
aagattcgcatgaatagggtggttcgcaacaacctgcgagtgcgcctgggtgatgtgatc
agcatccagccttgcccagatgtgaagtacggcaaacgcatccatgtgctgccaatcgac
gacacagtagaggggatcacaggaaatctgtttgaggtctaccttaagccatacttcctg
gaagcatatagaccgatcagaaaaggggacatcttcctggtgcgtggagggatgcgtgca
gtggagttcaaagtggtggagacagaccccagcccttattgcatagtggctccagatacc
gtgatccattgcgaaggggagcccatcaaacgagaggatgaggaggagtcattgaatgaa
gtgggctacgatgacattggaggctgcaggaagcagctagctcagatcaaggagatggta
gagcttcctctcagacaccctgctctcttcaaggccattggtgtgaagcctccccgtggg
atactgctgtatggtccccctggcactggtaaaaccctgattgctcgtgcagtggccaat
gaaaccggagctttcttcttcctgatcaatggtcctgagattatgagcaagctggctgga
gagtctgagagcaacctgaggaaagcctttgaagaagccgaaaagaacgctcctgccatc
atcttcattgacgaactggatgccattgctccaaagagagagaagacacatggagaggtg
gaacgccgcatagtgtctcagctgctgactctgatggatggcctgaaacagagagcacat
gtgattgttatggcagcgaccaacagacctaacagcattgacccagccctcaggcgattt
ggtcgctttgacagagaggtagatatcggtatccctgatgccacgggacgcctggagatc
ctgcagatccacacaaagaacatgaagctggctgatgatgtggatttggagcaggtggcc
aacgagacccacggccacgtcggcgctgacttagctgctctctgctcagaagctgctctt
caggccatcaggaagaagatggatctcatagacctggaagacgaaaccattgatgctgaa
gtaatgaactccttggctgtcaccatggatgacttcaggtgggctctgagccagagcaac
ccctcagctctgcgggagacagtagttgaagtgccccaagttacctgggaggatattggt
ggcctagaggatgtcaagagagaactccaggagcttgtacagtaccctgtggagcaccca
gacaaattcctcaaattcggcatgactccctccaaaggggtcctgttctatgggccccct
ggctgtggtaagacactgctggctaaagccattgccaatgaatgccaggcaaacttcatc
tccatcaaggggcccgagctgctcaccatgtggtttggcgaatccgaggccaacgtgcgc
gagatctttgacaaggcccgccaagcagctccctgtgtgctcttctttgatgagctggac
tccattgcaaaggcccgaggcgggaacattggggatggtggcggcgctgcagaccgtgtc
attaatcagatcctgaccgaaatggatggcatgtccaccaagaagaacgtcttcatcatc
ggtgccaccaacaggccagacatcatcgatccagccatcctgcgtcctggccgcctggat
cagctcatctacatccccctgcctgacgagaagtcccgggttgctatccttaaggccaac
ctgaggaagtcacctgttgccaaggacgtggatctggagttcctggctaagatgaccaac
ggtttttccggagctgacctgacagagatctgccagcgtgcctgcaaactggccatccgt
gagtccatcgagagcgagatccggcgggagcgcgagaggcagaccaacccctcggccatg
gaagtggaggaggatgaccctgtccctgagatccgcagagaccactttgaggaggccatg
cgcttcgctcgccgctccgtcagcgacaacgacatcaggaaatacgagatgtttgcacag
actctacagcagagccgtggcttcggcagcttcaggttcccatccggtaaccagggaggc
gctggcccaagccaaggcacgggaggtggcagcggcggcaacgtgtacagcgaagacaac
gatgatgacctctacgggtaa
DBGET
integrated database retrieval system
