Alligator mississippiensis (American alligator): 102564489
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Entry
102564489 CDS
T03087
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03030
DNA replication
amj03410
Base excision repair
amj03420
Nucleotide excision repair
amj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102564489 (RFC4)
03410 Base excision repair
102564489 (RFC4)
03420 Nucleotide excision repair
102564489 (RFC4)
03430 Mismatch repair
102564489 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amj03032
]
102564489 (RFC4)
03036 Chromosome and associated proteins [BR:
amj03036
]
102564489 (RFC4)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102564489 (RFC4)
DNA replication proteins [BR:
amj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102564489 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
102564489 (RFC4)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102564489 (RFC4)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102564489 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
102564489 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
Rad17
AAA_22
AAA_11
AAA_30
AAA_16
DUF815
AAA_24
Mg_chelatase
AAA_14
AAA_28
SLFN-g3_helicase
DNA_pol3_gamma3
AAA_19
AAA_5
RuvB_N
AAA_23
TIP49_C
AAA_7
DNAX_ATPase_lid
AAA_3
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
102564489
NCBI-ProteinID:
XP_014461730
UniProt:
A0A151M684
LinkDB
All DBs
Position
Un
AA seq
364 aa
AA seq
DB search
MQAFLKGPAAISTRPPAAKERAAAGAGSSGDAKRLKPVPWVEKYRPKCVDEIAFQDEVVA
VMKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVIR
EKVKAFAQLTVSGNRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYISRIIEPLTSRCSKFRFKPLSDKIQEQRLLDISEKENVKISSEAISYLVQVSEGDLRK
AITFLQSATRLTGGKEITEKVVTEIAGVVPKEAIHGLLAACRSGSFEKLETVTKNLINEG
YAASQLVNQLHDVIVESEDLSDKQKSTIAEKLADVDKCLADGADEYLQLISLCAIMMQQL
TQNS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcttgaagggcccggccgccatcagcacccggcctccggctgccaaggag
cgggcggcggcgggcgcgggcagtagcggcgacgccaagagactcaagcccgtgccttgg
gtggagaagtatcgcccgaagtgcgtggacgagatcgccttccaggacgaagttgtcgct
gtgatgaaaaaatccttggaaggagctgatcttcccaatcttttgttctatggccctcct
ggaacgggaaagacttccactattttggcagcagccagagaactttatgggcctgaactg
tttcggcagagagttcttgagttaaatgcttctgatgaacgtggaatacaagtgattcga
gaaaaagtgaaggcttttgctcagctaactgtatctggaaaccgttcagatggaaaggtt
tgtcctccattcaagattgtgatcctggatgaagcagattctatgacctcagcagcacag
gcagccttaagacgcactatggagaaggaatctaaaacaacacgtttctgtcttatttgt
aactacatcagcaggataattgaacccttgacgtctcgatgctccaaattccgtttcaag
cctctttcagataaaattcaggaacagagactactagatatttctgaaaaggaaaatgtg
aaaatcagcagtgaggcaatatcttaccttgttcaagtgtcagaaggagacttaagaaaa
gcaatcacatttcttcaaagtgctactcgattaacaggtgggaaagagatcacagagaag
gttgtcaccgaaattgctggggtggtccctaaagaagcaatccatggacttcttgctgcc
tgtcgaagtggctcttttgaaaagctggaaacagtaacaaagaatctaataaatgagggg
tatgctgctagtcagcttgtcaaccagctccatgatgttattgttgagagcgaagatctc
agtgacaagcaaaaatccacgatagcagagaaacttgctgatgtggacaaatgcctggct
gatggtgctgatgagtacttgcagctgatcagcctctgcgccatcatgatgcagcagctg
actcagaacagctag
DBGET
integrated database retrieval system
