Alligator mississippiensis (American alligator): 102564521
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Entry
102564521 CDS
T03087
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03008
Ribosome biogenesis in eukaryotes
amj03013
Nucleocytoplasmic transport
amj03015
mRNA surveillance pathway
amj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102564521 (NXF1)
03015 mRNA surveillance pathway
102564521 (NXF1)
03008 Ribosome biogenesis in eukaryotes
102564521 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102564521 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102564521 (NXF1)
03009 Ribosome biogenesis [BR:
amj03009
]
102564521 (NXF1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102564521 (NXF1)
mRNA cycle factors
Stress granule specific factors
102564521 (NXF1)
Ribosome biogenesis [BR:
amj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102564521 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
Tap-RNA_bind
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
102564521
NCBI-ProteinID:
XP_019351061
LinkDB
All DBs
Position
Un
AA seq
431 aa
AA seq
DB search
MRCGDAGRGAAGRLPGSPGPGPAAARGGPAMAEDGKGSYNEHDDRVGGGPGRRRKGRGPF
RGKMYSDPNHRPRNRGGAGHGPGPSPRGRLDEEDGDVPMSDVHDGPRCRYTPYGSRPNRR
GDDWHDRGRGGASNIHVTARRDQPVPDRGGNAGRDGTRKNWFKITIPYGRKYDRSWLLTA
IQNVCTVPFNPVEFHYDHNRAQFYVEDATAASALKLVSRKITDRENYKVVIIINSSAPPQ
SVQNELKPEEIEHLKLCMSKRYDRLQQALDLKDLRTDSDLVAQNVDMVLNRRSCMQAVLR
IIEENIIPELLSLNLSGNKLYRLDDLAELAQKATNIKILNLSRNELKSERELDKVKGLKL
EELWLDGNPLCDCFRDQSTYIRSVPAPARPPGLPRPRHAWRGTAWRDHEGTPRPPQTGTG
TSPLDTCGAKL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgtggcgacgctgggcgaggagcggcgggtcggttgcccggctccccgggaccg
ggcccggcggcggcgcgaggaggccccgcgatggcggaggacgggaagggcagctacaac
gagcacgacgaccgcgtgggcggcgggccaggccggcggaggaaaggccgaggccccttc
cgcggcaagatgtacagcgacccgaaccaccggccgcgcaaccggggcggcgccggccac
ggccccggccccagcccccgcggccgcctggacgaggaagacggcgacgtgcccatgagc
gacgtccacgacgggccccgctgcagatacaccccttacgggtcgcggccaaaccggcga
ggtgacgattggcatgataggggccggggcggcgccagcaacatccatgtcacagcgagg
cgcgaccagcccgtcccagatcgcggcggcaatgccgggcgcgacggcacccggaagaac
tggttcaagatcacgatcccgtacgggaggaagtacgaccggtcgtggctgctgaccgct
atccagaatgtgtgcaccgtccctttcaaccccgtggagttccattacgaccacaaccgg
gctcagttctacgtagaagacgccactgcggccagcgctctcaaactggtgtcccgcaag
atcacggacagagagaactacaaggtggtgataatcatcaactcgtcggccccgccccag
tctgtccagaacgagttgaagccagaggagattgaacatctgaagctttgcatgagcaag
aggtatgaccgtctccagcaggccctggacctcaaggacctccgcacagactctgacctg
gtggcgcagaacgtcgacatggtgctgaaccggcgcagctgcatgcaggctgtgctgcgc
atcattgaggagaacatcatccccgagctcctgtccctgaacctgagtggcaacaagctg
taccggctggacgacctggccgagctggcgcagaaagccaccaacatcaagatcctcaat
ctctcccgcaatgagctgaagtcggagcgggagctggataaggtgaaggggctcaagctg
gaggagctgtggttggacgggaacccgctgtgcgactgcttccgggaccagtccacttac
atcaggtcagtgccagccccggcaaggcccccgggtctcccccgcccacgccatgcctgg
cgggggacagcatggcgggaccatgaaggcacccctcgcccaccccagacaggaaccgga
accagccccctcgacacctgtggggccaagctctaa
DBGET
integrated database retrieval system
