Alligator mississippiensis (American alligator): 102564540
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Entry
102564540 CDS
T03087
Symbol
CPSF4L
Name
(RefSeq) cleavage and polyadenylation specific factor 4 like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102564540 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102564540 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
amj03019
]
102564540 (CPSF4L)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102564540 (CPSF4L)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102564540 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCHC
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
102564540
NCBI-ProteinID:
XP_014457476
UniProt:
A0A151N2C1
LinkDB
All DBs
Position
Un
AA seq
261 aa
AA seq
DB search
MQELVARVEKLTFKLEMDVMQQRGALLLPFPGMDKSGAAVCEFFLRGLCGKGLMCPFRHA
HGEKSVVCKHWLRGLCKKGDHCEFLHEYDVTKMPECYFYSKFGECSNKECPFLHLDSASR
AKDCPWYDEGFCKHGPLCRYKHTRRVMCTNYLAGFCPDGPRCKFVHPKANLMLDSLERSK
GLPVTTDGDGGHKPSLPEAQLFPRPSWSSSAQHPAKKAPETCGYPYGFLRPLEQVTCFKC
GEKGHYANKCGKSRLGMLLGK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcgtggccagggtggagaagctcacgttcaagttggagatggatgtgatg
cagcagagaggggccctgctgctgcccttcccgggcatggacaagtcgggggcagccgtg
tgcgagttcttcctccgcgggctgtgtgggaagggcctgatgtgccccttccggcacgcg
catggggagaagtcggtggtgtgcaagcattggctgcgggggctctgcaagaagggggac
cactgcgagttcctgcacgagtacgacgtcaccaagatgcccgagtgctacttctactcc
aaattcggtgagtgcagcaacaaggagtgccccttcctgcacctcgactcggcttccagg
gcgaaggactgtccttggtacgacgaggggttctgcaaacacggtcccctgtgcagatac
aagcacacccggagggtcatgtgcaccaactacctggctggcttctgccccgatggccct
cggtgcaagttcgtgcaccccaaggccaacttgatgctggacagcttggagcgctccaag
gggcttcccgtgacgacagatggagacggcggtcacaagccgtccctcccagaagcccag
ttgttccctcgcccttcctggagcagcagtgcccagcacccggccaagaaagcaccagag
acctgcggctacccctacggattcctgcggcccctcgagcaggtgacatgcttcaagtgt
ggggagaagggtcactacgccaataaatgcggcaagagtcgtctggggatgctgctgggg
aagtga
DBGET
integrated database retrieval system
