KEGG   Alligator mississippiensis (American alligator): 102564723
Entry
102564723         CDS       T03087                                 
Symbol
NWD2, KIAA1239
Name
(RefSeq) NACHT and WD repeat domain containing 2
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:amj04990]
    102564723 (NWD2)
Domain-containing proteins not elsewhere classified [BR:amj04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   102564723 (NWD2)
SSDB
Motif
Pfam: WDR55 Beta-prop_NWD2_C EIF3I WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 NPHP3_N Beta-prop_WDR90_POC16_2nd AAA_16 Beta-prop_NUP159_NUP214 WD40_RFWD3 DUF4062 AAA_28 Beta-prop_RSE1_2nd NPHP3 AAA B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 102564723
NCBI-ProteinID: XP_019336003
LinkDB
Position
Un
AA seq 1735 aa
GRLPCPRDSALRRAAFCGNLAALPSHLVPGGRSVRVFISANPEDTIAERNALREHVYPKL
REFCRENYGLEFQVIDLYWGVETEEWDSPELQKTRMKLLEDCLKTSAGPCFVGLLGEKYG
SIRIPGEVESSEFEMIIDAAVEAKLETRLLEEWYCRDENAVPPAYYLRPKSEMLKNYHNT
MESSANSMNESKWQDIAEEIKRIFKTAVKLLYEKGKMKHSQAKRYLSSAIEDEFDFALGK
QTPAFLKKCVCYIRKIANIERFVKIPEMEKYMDVTYTAGKFMRDPEALEKLIKLRDEFIP
TIVASSNLRVYTSITHCDMKLGYSQDVENHYIEGLGKQFYEDMIDIIQATVQQNFDTETD
LLYDEVLQHSSLCKTYSSFYEYRCEALNIVHKYILPSKVGHINPLIIYGGPCTGKTLLLG
EVAKKAYMWLQEEMGPESDPVVITRFLGSTEMSTDLKNLLQSICEQLAINYRCLVQSYPK
KIHDLRDLFINLLNESSFHRPLVIIFDALEQLSDNDDARKLWWLPIHLPRSVRIILSTLP
NKHGILQKLRCLIHEEDNYIELTARDRKMCSQVLKHQLLRIKRKVTSGQQIYVNEAFSKC
TLPMFVNLTFREVRNWRSHKDVDESSLRVTVHESIEQLFCSLESKCGPKLLSRALGYITM
SKSGLSEMELEDILALDNSVMDELNEIVRQSNPLRVPYIYIARLKEGLHGYLIERQVKSV
TLLVWSNRHLHLIAQKLYLHNEEDLHEMHTNLAEYFLGVWSGGRRKSFYNNDQYLNGCLN
NDRNMNDEDKHCIDQTAFDRQSPEQPWVFQCNTLEPDIFFVNHRKMTELIHHLTRCGRTD
DLLYGVIMNFSWLYTMIKIGQFDKALSDVELAYNYSQEKELKFLASTLRSIKFKVIKYPG
SLSAELQQRLLPVVSSLPKLRHLLLECDKDGPKYCSIVPLHSSMDVTYSPERLPLSSSCM
HVTEILPTFNPSTVIAALENGSISTWDVETRQLLRQITTAPSVILGMKLTSDEKYLVVAT
TKNTLLIYDNLNSCLLSEVEIKGSKHCGVGGGSNFINGFTLSINHALAWLEASKDVTVID
LLYGWPLYHFHCWYEVTCVQCSPDGVYAFCGQYLNTTTIFHLGSGEKLSTVTSEFSGGFV
KFLLVLDTAQEMVMVDNEGGLSVWNTEEITNPQLTDDFDCRREDSEVVSIELSEDQSAIL
VCKALSIELLDTSVWKVAEKFRAKHNERFISAVLSKNGNCIIASMENTSAIFVWRRDTGQ
CMASLQEISGTIVRLIKSNHHNMLLSLSTSGVLSIWDIDIITAMSNIDKSGKPIQRLILP
ARGEVIYTLDGSEAVHKWNFSTGFIEAVFKHEGIVENCVLTSSGEIMVTSDDKCSQYVWH
AVSGDNIFRINGQRISQLMITHNDQFVVSLCEQNASRVWRLATGHRVCNILVALQNAFIT
SANTFVVGMTKNKVLAVSLWTGSITKKFCCDDGTTIVNIKLIPDCPDVVVFITSTETVNI
WSLTEEVICRRVQLPNNFLKNLEDFEISPNGKVGIISRGDENINVLDLQSGKLRVVHAPG
IIWRQRLSRDGRYLVYICFRSEDDDDNGAVSSLTVMRLADGKNIGACSLYKNPTFLALSQ
RHLNIIIGFDDGSIGTYTVVDRVDATLKIKIATSNSRQIFNNATQVIRPKCHNYSFKATA
DCIWRESTEVFTRDSPITVTDPEASEATPTKKHNYCYDRVCSAIDCRTHNFAADN
NT seq 5208 nt   +upstreamnt  +downstreamnt
gggaggctgccctgcccgcgggactcggcgctgcggcgggcggctttctgcgggaacctg
gcggcgctgccctcgcacctggtgcccggcggccgcagcgtccgcgtcttcatcagcgcc
aaccccgaagacactatagctgaaagaaatgcactaagagaacatgtgtatccaaaactg
agagaattctgcagggaaaactacgggctggaatttcaggtcatagacttgtactgggga
gtagaaacagaagaatgggatagtcctgagctccagaagactcgtatgaagctgttagaa
gattgcttgaaaacttctgcaggtccatgttttgttggcctattgggagaaaaatatgga
agcatccgaatacctggagaagttgaatcatcagaatttgaaatgattatagatgctgct
gtggaggcaaaactggagaccaggcttctggaagagtggtactgcagagatgagaatgca
gtaccaccggcatattacctcagaccaaaatctgaaatgctaaagaactaccataacact
atggaatcttctgcaaattccatgaatgagagcaaatggcaagacatagcagaagagatt
aagaggatttttaagactgccgtgaagttgctgtatgagaaaggaaaaatgaaacacagc
caagcaaagagatacctttcttctgccattgaagatgaatttgactttgccttgggaaaa
cagacaccagctttcctaaagaagtgtgtttgttacattcggaaaattgccaacattgaa
cgttttgttaaaattccagagatggaaaaatatatggacgtaacttacacagctggaaaa
tttatgcgggatccagaagcccttgagaaactgatcaaactcagggatgaatttattcca
accattgttgcatcatctaatctgagagtctatacttccattactcattgcgacatgaaa
cttggttattcacaagatgtggagaatcattacattgaaggacttggtaaacagttttat
gaagatatgattgatataattcaggcaacagtacaacagaattttgacactgagacagac
ttgctttatgatgaagtccttcaacattcttcattatgtaaaacatactcctctttctat
gagtataggtgcgaggctctaaacatagttcataaatacattctgcctagcaaagttgga
cacattaaccctcttatcatatatggaggaccttgcactggaaaaacccttttgttaggc
gaagtagcaaagaaggcttatatgtggctgcaggaagagatgggaccagaatctgaccct
gtggtaattacaagatttttgggatccacagaaatgagtacagatcttaagaatctgctt
caaagtatttgtgaacagttagcaattaactatcgttgcttagtacaaagttaccccaaa
aagatacatgatcttcgagatttgtttataaatctcttgaatgaatcttcatttcacaga
ccgctggttataatatttgatgccctagaacagctttcagataacgatgatgctaggaag
ctgtggtggctccccattcaccttccccgttcagtacggataatcttatcaacactgccg
aacaaacacgggatactgcaaaaactgaggtgccttattcatgaagaagacaactatatt
gagttgactgcaagagatagaaagatgtgtagccaagtgctgaaacatcagctgttacga
attaaaagaaaagtaacatcagggcaacaaatttatgtcaatgaagcattttcaaagtgc
acactgcctatgtttgtgaatttaaccttcagagaggtcagaaactggagatctcacaaa
gatgttgatgagtcctcccttcgtgttactgttcatgaaagcatagagcagttattctgc
tcattggaaagcaagtgtggaccaaaactgttgtcaagagcacttggctacatcacaatg
tccaaatctggcctaagcgaaatggaactggaagatattttagctcttgacaatagcgtt
atggatgaactaaatgagattgtcaggcaaagtaacccattgagggtaccatatatatac
attgcaagacttaaggaaggcttgcatggatacttgatagaaaggcaagtaaaaagtgta
acactgctagtgtggtcaaataggcacctccatcttattgcccaaaaactgtatctccac
aatgaggaagatttacatgaaatgcataccaacttggcagagtatttccttggagtttgg
tctggtggccgaagaaaatccttttataacaacgatcaatatttaaatggttgccttaac
aatgatagaaacatgaatgatgaggacaagcactgtatagatcagactgcttttgacagg
cagtcaccagaacagccatgggttttccagtgtaatacactggagcctgacatctttttt
gtcaatcacagaaaaatgacagaactcatacatcacttgacaagatgcggaagaacagat
gatctactatatggtgtcataatgaacttcagctggctgtacacaatgattaaaataggg
cagtttgataaagcactttctgatgtagaattggcttataactactcacaagaaaaggag
ctgaaatttctagcaagcactttgcgcagtataaagttcaaagtgataaaatatccaggt
tcactctctgctgaattgcaacagaggcttcttccagttgtaagctcattgcctaaactg
agacacctccttttagaatgtgacaaagatggacctaaatactgctctattgttcctcta
cattcttctatggatgtgacttacagccctgaacgattgcccttgtcatccagttgcatg
catgtcactgagatcttgccaacctttaatccaagtacggttattgctgcactagaaaat
ggctccatcagcacatgggatgtagagactcgccaactattaaggcaaattacaactgct
ccatctgtaattttaggaatgaaacttactagtgatgaaaagtaccttgtagtggctaca
acaaagaacacacttttgatttatgataatctaaattcctgtcttttgtctgaagtagaa
attaagggatcaaaacattgtggagtggggggtggttcaaattttataaatggatttacg
ttgtccattaatcatgcacttgcttggctggaggccagcaaagatgttactgtaatagac
ctactttatggatggcctctttatcacttccactgctggtatgaagtcacttgtgtgcag
tgttctccagatggagtctatgctttctgtgggcaatatctgaataccacaacaatattt
catttaggcagtggagagaagctgtctactgtaacctctgaattttccggtggatttgtg
aaatttcttcttgttctggacacagctcaagaaatggtgatggtagacaatgagggtggc
ctttcagtttggaatactgaggaaatcacaaatccccagctgacagatgattttgattgt
agaagagaagacagtgaagttgtcagcattgaactttctgaggaccaaagtgcaatttta
gtatgtaaagcactcagtattgaacttctcgacactagtgtttggaaggtggctgaaaag
ttcagagcaaaacacaacgagcgctttatctctgcagtgttatccaaaaatggcaattgt
ataattgcttccatggaaaatacctcagccatttttgtttggaggagagacacaggacag
tgcatggcaagcttacaggaaatctcaggaaccatagtcagactaattaaatcaaatcac
cataatatgctgctatccttatccaccagtggtgttctttccatatgggatatagatatc
ataactgctatgtccaacattgacaaatctggcaaacccattcagagactaatattgcct
gccagaggtgaggtaatttatacattggatggatcagaagctgttcataagtggaacttt
agcactggatttattgaagctgtgttcaagcatgaaggtattgttgaaaactgtgtgctg
acctcttctggagaaataatggttacatcagatgacaaatgtagccagtatgtatggcac
gctgttagtggtgacaatatcttccgcattaatggacagaggatatcccagttgatgatt
actcacaatgatcagtttgttgtctcactatgtgaacaaaatgcatccagagtttggagg
ctggctacaggacacagagtttgtaatattctagttgccttacagaatgcatttataact
agtgcaaatacatttgtagttggaatgacaaagaataaagtgttggcagtaagtctctgg
acaggaagcataaccaagaagttttgttgtgatgatggaacgaccattgttaatattaaa
ctgattccagactgtccagatgttgttgtatttataacatctactgaaactgtgaacatc
tggagtctgacagaggaagtaatctgcagacgtgtacaactgcctaacaatttcttaaaa
aatttagaagactttgaaatatcccctaatgggaaggtaggaattatatcccgtggtgat
gagaatatcaacgtgcttgatttacaaagtggcaaacttcgtgtagtgcatgcccctggc
attatctggcggcaaaggctgtctcgtgatggccgttaccttgtgtacatctgttttcgt
agtgaagatgatgacgataatggtgcagtctctagcttaactgtaatgagactggcagat
ggtaaaaatatcggtgcctgttccctttacaaaaatccaacttttcttgcactctctcag
aggcatttgaatattattataggctttgatgatggaagcataggtacttacactgtagtg
gatcgagtagatgccacactgaaaattaaaattgctacttcaaatagccgtcaaattttc
aacaacgcaacacaagtgattaggcctaaatgtcacaattatagcttcaaagcaactgca
gactgtatttggagagagtccactgaggtctttactagagatagccctatcacggtgaca
gaccccgaagcaagtgaagcaacaccaaccaaaaaacacaattattgctatgacagagta
tgctcagccatagattgcagaacacacaattttgctgctgacaattga

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