Alligator mississippiensis (American alligator): 102564809
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Entry
102564809 CDS
T03087
Symbol
LOXHD1
Name
(RefSeq) lipoxygenase homology domains 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102564809 (LOXHD1)
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102564809 (LOXHD1)
Cilium and associated proteins [BR:
amj03037
]
Other cilia and associated proteins
Stereociliary proteins
102564809 (LOXHD1)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
Other domain-containing proteins
Others
102564809 (LOXHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLAT
DUF7755
ATS3
Motif
Other DBs
NCBI-GeneID:
102564809
NCBI-ProteinID:
XP_019351687
LinkDB
All DBs
Position
Un
AA seq
2180 aa
AA seq
DB search
MEDEYYKKRVYEVVTVTGDVRGAGTDANVFVTLFGELGITPKTHLTSKSRSAFERTKTDV
FRIKTYNVGQIKKIRIEHDNTGMNASWFLDRVIVTDMNRPHLRFYFPCNNWLSKDEGDRQ
FTRDLVATLNPMDVPKMNKYVVRVFTGDLSGSGTDADVYINIFGKHGDTGERKLDNDKDN
FEKGAEDKFTLDAPNLGKLRKISIGHNNKGGSAGWFLAKVIIEDIGNKAEYEFPCNRWFA
LDEDDGKIQRDILVGGMEATGLVYTVAVVTGDIRGAGTNSKIHVTLHGSKGLKNSGKIFL
EGGEFERARTDVFHIEIAALLSPLSRVTIGHDNCGVSSGWYCEKVVVYCPFTGIEQTFPC
AKWLDEDEGDGLVERELYEMVSLRQKRLKKNPWSLWIWTSDIKNAGTDATVFLQVYGDKG
KSDTIKLDSKSDDFECGRTDKFVIELPDLSPIYKVRIWHEKKTPFSGWHLHKVTLLKTLT
KEKYTFKCDRWLDINEDDNEIVRELPAEGPLVTEVMPLIKYRVTVCTGTLSGSGTDANVY
VCLIGDQGDTGDRFLQNSINTTNKFEKGNADEFYLEAVNLKQVRRVRIGHDGKGGSSGWY
LAKVIVREEGQPESDAVEFPCNRWLDKNEDDGQIVRELVPATFSPLLKNVNYHISVKTGD
VPGASSDSKVFIKLYGEKADTSKEFLLVSDNDLGNYFERGRVDEFTVETMDIGKINRILI
GHDNVGLRSGWFLSSVQITVPVQGRQYMFPCNRWLDKDEADGKVEVEVYPSEILPIEKLV
NYEVTVVTGSMRSAGTNANVFMQMYGEAGKTELITLSNRSNNFERGAKEIFKVEAAEIGS
IYKIRIGHDAKGIGDGWYLENVTIKRMVKKVQDNEWKRKKKKKSGEEEDEEPVPEEEMEV
YNFVAQRWLAKDEGDKEIVVELVPEEGSELEENSYEVHVFTGTVWGAGTDANVYVNIYGE
EKGDTGERHLKRSNNMNKFEKGQEDIFTIKAIDLGPLKKIRIRHDNSGTNPSWYLERVDV
VDLNESTTYYFPCQRWLAVEEDDGQIVRELVPVAEAFVKKDVSSEDQSPTSLGLEQKAKS
TTYIVRVKTGDRKHSGTDANVFIILYGTKDDTGIMSLKASKTYKNKFERGQIDEFTLEAV
DLGHLKKIKTGHDNKGNCTGWFLEWVEIDAPSLGKCLMFPSGRWLDKLEDDGRTERIIFP
APLQTREYVPFVPYEITVYTSDIFGAGTDADVFIVLYGNTGISTRQKSLCLNKRERKMYF
ERNSVNQFIVELEDVGDFIEKIRIGHNGAGINPGWHLDRVDIRRLLPNAKGSETITFPCE
RWLAKSEDDGETIRELVPSDIFTEKLTKDGKLKQIEQEVEEPLEVHTYGISVFTGDVYGA
GTDANVYLTMYGDLGDTGERKLSKSETNMNKFERGQEDVFTVQAVDLGLVYKIKIRHDNA
MLNPEWYLDKVEITDEDTEEVFVFLCERWLSKKREDKKIERILYEQNYEGKRGSLDGADL
SLSSQDSNANMKETKKPSLVESIQEGLSIPYHVTLTTGIEPGASTDSRVYIIIMGPQKVQ
TDRLWLDLTEDKDEFADGSVEKFSVWGADVGEIKNVEVGHDGGTPESAWLVEELALVVPT
KGVMYNFICNCWLARDKGDGRTSRVFNIVDADCINIGLKVLYEVTVVTGDQQGAGTDTSI
YMTVFGSNGSTEEMQLDKNGDRFERAQEDSFVMEINDIAPLRKMRIRTDGNGSRPDWFLE
KILMKNLTNQEVTTFTYSEWLSKVHHPKGALVCEMPGVIDDEQMMEDTTYTVQVKTSDVI
GAGTDANIYLIIFGENGDTGTLPLKESNKSNKFERNQMDIFEFNDMLSLGELCKVRVWHD
NKGIAPGWHLEYIEVIDSAMDETFRFQCDRWMAKSEDDGQLIRELACANNDILEEKERTT
YEIVTVTSNKENSETKEDVWIILEGRKCRSKEFVLENSPKKKRFGRGATDNFQFSSKNVG
SIAAICVGHCPKDGKKSSAKADVYWHVEEIIITEMELCNKFFFRCNAKIPLRHKKSDYRV
FECVKTVESFASKTRSLVPVKYEVIVTTGFEKGAGTDANVFVTVFGVNGDSGKRALKNKL
WNLFERGRTNRFYLETLDLGELKKVRIEHDNSGMASSGWLLERVEITNSATGVSTIFPCG
KWLDENRGDGLIWRDLFPRQ
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgagtattacaagaagagagtttatgaggtagtgactgtgacgggagatgtg
cggggagcaggaaccgatgctaatgtctttgttactctctttggagagttagggattacg
ccgaagactcatctcaccagcaagagtagaagtgcttttgagaggaccaaaacagatgtg
ttccgaatcaaaacctacaatgttggacaaataaagaaaataagaattgagcatgacaac
accggaatgaatgcaagctggttccttgaccgtgtgatagtgactgacatgaacagacct
cacctccggttttactttccttgcaacaactggctgagcaaggatgagggagaccgacag
ttcaccagagatctggtcgccactctgaaccctatggacgtgcccaaaatgaacaagtat
gtggtcagagtgtttactggtgatcttagcggcagtggaacagatgctgatgtttacatt
aatattttcggcaagcacggagacacaggggagaggaaattggacaatgacaaggacaac
tttgaaaagggagctgaggacaagttcaccctggatgccccaaacttaggaaaattaaga
aaaatttccataggccataacaacaaggggggctctgctggctggttccttgccaaggtc
atcattgaagacataggcaataaagctgagtatgaattcccatgcaaccgctggtttgca
ttagatgaagatgatgggaaaattcaacgggacattctcgtgggaggcatggaggccaca
ggtctcgtttacaccgttgctgtcgtgacaggggacatcagaggtgccggcactaactct
aagatccatgtcaccctgcatggctcaaaaggtttaaagaatagtggaaagattttcttg
gaaggaggcgaatttgaacgtgccaggacagatgtatttcatattgagatagcagctctt
ctcagccctctgagcagagtcaccatcgggcatgataactgtggtgtcagttctggttgg
tattgtgagaaggtggtggtttattgcccattcactggtattgaacaaaccttcccctgt
gcgaaatggctggatgaagatgaaggagacggcctggtggaacgggagctctacgaaatg
gtctccctgcgtcagaagagactaaaaaaaaacccctggtctctttggatctggacaagt
gacattaagaatgcggggacagatgccaccgtctttctccaggtttatggggacaagggg
aagtcagatacaattaaactggacagcaaatcagatgactttgaatgtggacggactgac
aaatttgtgattgagctccctgacctgagcccaatttataaggttcggatatggcatgag
aagaagactcccttctctggctggcatctacacaaggtgactctgctgaaaacgctgaca
aaagagaaatatacattcaaatgcgaccgctggctagatataaatgaagacgacaatgag
atcgtgagggagctccctgcagagggaccgctggtgactgaagtcatgccattgataaaa
taccgagtgaccgtctgcactggaacgttaagtgggagtgggacagatgccaatgtctat
gtctgcctcattggggaccaaggagacacaggggaccgtttcctccagaacagcattaac
accacgaataaatttgagaagggcaatgctgatgagttctaccttgaagctgtgaatctg
aagcaggtgaggagggtcaggatagggcatgatggcaaaggaggaagcagtggctggtac
cttgccaaagtgatagtgagggaagaaggacagccagaaagtgatgctgtggaatttccc
tgtaacagatggcttgacaaaaatgaggatgacggtcagattgttcgagaattggtgccc
gctacgttctcaccgctgctgaaaaatgtcaactaccacatcagtgtgaagacaggagat
gtccctggtgccagctcagattctaaagttttcatcaagctctacggtgaaaaggcagac
actagcaaggagtttctgttagtttctgataatgacctaggcaattactttgaacgtgga
cgagtggatgaatttactgtagaaacaatggatatcggcaagatcaacagaattcttatt
ggacatgataacgtaggtctccgatctgggtggttcctgtctagtgttcagatcacagtt
cctgtccaagggaggcaatacatgtttccttgcaaccgatggcttgacaaagatgaggcg
gatgggaaagtagaggtggaggtctacccaagtgaaatcctgcccattgagaaattggta
aactatgaagtaactgtagtcacggggagcatgcggtcagcaggcaccaacgccaatgtt
ttcatgcagatgtatggcgaggctggtaaaaccgagttgatcaccttgtcaaacagatca
aacaactttgagaggggagcgaaggagatttttaaggtagaggctgcagagattggctca
atctacaagatacgaattggtcatgatgcgaagggcattggggacggctggtacctggag
aatgtcacaattaaacggatggtaaaaaaggttcaggataatgagtggaaaaggaagaaa
aaaaagaaatctggtgaggaagaagacgaggagcctgtgccagaagaagaaatggaagtc
tataactttgtggcccagcgctggctggctaaagatgaaggggataaggagatagttgtg
gagctggtaccagaagaaggatctgaacttgaggagaattcttatgaagtccatgtcttc
actgggactgtatggggagctgggactgatgctaatgtctacgtgaacatatatggtgaa
gaaaaaggtgataccggggagcgtcatctgaaaagatccaataacatgaacaagtttgag
aagggccaggaggatatattcactatcaaggccattgatttgggaccactgaagaaaatc
cggatccgtcacgacaactctggtacaaacccaagctggtacttggagagggtggatgtt
gtcgatctcaatgaaagcaccacgtattatttcccatgccagcggtggttggcagttgag
gaagacgatgggcagattgtgagggaactggttccagtggctgaagcgtttgtaaagaaa
gatgtgagcagcgaagaccagtctcctacatcattgggcctggagcagaaagctaaatcg
acgacgtatattgtgagagtcaaaaccggggacaggaagcattctgggacagatgccaat
gtcttcataatactctatgggacaaaagatgacacaggaataatgagcctcaaggcctca
aagacttacaagaacaaatttgagcgagggcagattgatgagtttacactggaagctgtg
gaccttggacacttgaagaaaataaagactggccatgacaataaaggtaactgcactgga
tggtttctggaatgggtggaaatcgatgccccatcacttggaaaatgcctgatgttccct
agtggtcgctggctggataaactggaggatgatggacgcactgagagaattatcttccct
gcaccgctgcagacgagggaatatgtgccatttgtcccttacgagatcacagtctatacc
agtgacatctttggagctggcactgatgctgatgtcttcattgttctgtatggaaatacc
gggatctccactcgacagaagtccctgtgcctcaacaagagggagcgaaagatgtacttt
gagaggaactcagtgaaccagttcattgtggagctggaggacgttggcgactttatcgag
aagatacggatagggcacaatggcgctgggattaatcccggctggcatttagatcgagtg
gatattcggagacttctgccgaatgcaaagggttcagaaaccattacgtttccatgtgaa
aggtggcttgcaaaatccgaagatgatggtgagaccataagagaactggtaccatctgat
atcttcactgaaaagctcacaaaagatgggaaactcaagcagatagaacaggaagtggaa
gaaccactggaggttcatacatacgggataagcgttttcactggagacgtgtacggtgct
gggacggatgcaaatgtttacctgactatgtatggagacctaggggacactggagagagg
aaactcagcaagtctgaaacaaacatgaacaaatttgaaagaggccaggaggacgtgttc
acagtgcaggcggtggacctcggccttgtgtacaagatcaagatccgtcatgacaatgcc
atgctgaatccagagtggtacctggacaaagtggagattacagatgaagatacagaagaa
gtgtttgtgtttctgtgtgaacgctggctctctaaaaagagggaggacaagaagatagag
cggatactttacgagcagaactacgaaggcaaacggggcagtctggatggtgccgatctc
agcctgagcagccaagacagcaacgcaaacatgaaggagacgaagaaacccagcttggtc
gagagcatacaggaagggttatcgattccatatcatgtcacactcacgactggcatagag
cccggcgcgagcactgacagccgagtttacatcatcattatggggccgcagaaagtgcaa
acagacaggctgtggctggatcttacagaagataaggatgagttcgcagatggctccgta
gagaaattctctgtttggggagcagatgttggggagattaaaaacgtggaggtggggcac
gatggtggcacaccagaaagcgcttggctggtggaggaattggcactggttgtgcccaca
aagggtgtcatgtataacttcatctgcaactgttggttggccagagataaaggggatggg
cgcacatcacgggttttcaacatagtggatgccgactgcattaacattggcctcaaggtt
ctctatgaagttacagttgtgactggagaccaacaaggcgctggcactgacaccagtatt
tatatgactgtttttggatcgaatgggagcactgaggagatgcagctggacaaaaatgga
gacagatttgagagggcccaggaggacagttttgtcatggagatcaatgatattgcaccg
cttcggaagatgaggattcgaactgatggaaacgggagtcgcccagactggttcctagag
aagatcctcatgaagaacctgactaatcaagaagtgaccacatttacgtacagtgaatgg
ctgtcaaaggtccaccatcctaaaggagctctcgtgtgtgagatgccaggtgtgatagat
gatgagcagatgatggaggatacaacctacactgttcaggttaaaaccagtgatgttata
ggagctggtacagatgccaatatctacttgattatctttggagagaatggggacactggg
acccttccactgaaggaatctaataagtctaacaagtttgaaaggaaccagatggatatc
tttgagtttaatgacatgctgagcctgggagagctctgtaaggtgcgagtctggcatgac
aacaaagggattgcaccggggtggcacttggaatatattgaggtcatcgattctgccatg
gatgagaccttccgcttccagtgtgatcgctggatggcgaagagtgaagacgatgggcag
ctcatcagagaactggcttgtgccaacaacgacatcctggaggagaaggaacgtaccacg
tacgagattgtcaccgtaacaagcaacaaagagaattcagaaaccaaagaagatgtctgg
atcatcttagaaggaaggaagtgtcgctcaaaagaatttgtcttggaaaattctccgaag
aaaaagagatttggaagaggagcaacagacaattttcagttttcttcaaagaacgttggt
agcatcgccgccatctgtgttggtcactgtccaaaagatggaaaaaagtcgagtgcaaaa
gctgatgtgtactggcatgtcgaagagataatcataacagagatggagctttgcaacaaa
ttctttttcagatgcaatgcaaaaatcccgctgcgtcacaagaagagcgactacagagtc
tttgagtgtgtcaagaccgtagagagtttcgccagcaagacccggagtttggtgccagtc
aaatacgaggtcatcgtgacgaccgggtttgaaaaaggagctggcaccgatgccaacgtc
tttgttaccgtctttggcgtcaatggagattcgggcaagcgggcgctcaaaaacaagctc
tggaacctctttgaacgtggcagaaccaataggttttacctggaaaccctggacttggga
gagctgaaaaaagtccggattgagcatgacaacagcggcatggcgagcagcggctggttg
ctggagcgggtggagatcaccaactcagctactggagtcagcacaatattcccttgtggg
aagtggctggatgaaaatcgaggagatggtttaatctggagggatctgtttcccagacag
tag
DBGET
integrated database retrieval system
