Alligator mississippiensis (American alligator): 102564868
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Entry
102564868 CDS
T03087
Symbol
CTR9
Name
(RefSeq) CTR9 homolog, Paf1/RNA polymerase II complex component
KO
K15176
RNA polymerase-associated protein CTR9
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102564868 (CTR9)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102564868 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
102564868
NCBI-ProteinID:
XP_006258907
LinkDB
All DBs
Position
Un
AA seq
1165 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGRRSKKGAGEFDEFVNDDSDEDLPVSRKKKRRKGSGSEQDGEEEEGERKKKKRRR
PPKTDEGSDDEENENGPRPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSD
EDKLKIADDGHARNSNSDSDDAEQQQNKRVVSDSDSDNRNKSGSEVGSPRRSSARPSDDE
SDSDRSVRKRRQSDSDQSDNESVQSGRSRSGGSENESRPASHSADSDRDSDRGSDNEGSG
RGSGNESEPEASNNEVSEGGSDDSD
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctctatcgagatccccctccgggacacggacgaggtcattgagcttgac
ttcgatcagttaccagagggggatgaagttataagtatcctgaaacaagaacatacccag
ctgcacatatggattgccttagcgttggaatactacaagcaaggcaaaacagaagacttt
gtgaaactattggaagctgcacgtatagatggtaatttggattatagagaccatgaaaaa
gatcagatgacatgcttggatacccttgcagcatactatgtacagcaagctcggaaagaa
aagaataaagataacaagaaggagctcattacacaagcaaccttgctatatacaatggct
gacaaaataatcatgtatgatcagaaccacttgttgggaagagcttgcttttgtctgcta
gagggtgataaaatggaccaagctgatgcacagtttcactttgtgctcaaccaatctcca
aataatattccagcccttcttggtaaagcatgcatttcattcaacaagaaagattataga
ggagcccttgcctactataagaaagcactgcgaacaaatcctggctgcccagccgaggtt
cggttaggtatgggccactgctttgtgaaattgaataagctggaaaaagctcgtctggca
ttcagcagggctctagagctcaactcaaaatgtgtaggggctttggttggactggctgtt
ttggaactcaataacaaagaggctgattccatcaaaaatggtgtccagctcctctctaga
gcttacacaattgatcccagtaacccaatggtgttgaaccacttagctaatcacttcttc
ttcaaaaaggattatggaaaggtacaacacttggctcttcatgctttccataatacggaa
gttgaagctatgcaggcagagagttgctaccagctggctagatcttttcatgtacaggaa
gattatgaccaggctttccaatattactaccaagccacacaatttgcctcctcttctttt
gtattaccattttttggtttgggtcaaatgtacatttatcggggagacaaggagaatgca
tcacagtgctttgaaaaggttttgaaagcctatccaaacaattatgagactatgaaaatc
cttgggtcactgtatgcagcttctgaagaccaggaaaaaagagatattgcaaagggtcac
ttgaagaaggttacagaacagtatccagatgatgtggaagcttggattgaattagcacag
attctagagcagactgatatacagggggctctttcagcctacggcacagcaactcgcata
cttcaagagaaagtgcaggcagatgtaccgccagagattttgaataatgttggtgctctc
cactttcgacttggaaacctaggtgaagcaaagaaatattttttggcatcactggatcgt
gctaaggcagaagctgaacatgatgaacattactacaatgctatttcagtgaccacatcc
tataaccttgctagactatatgaggcaatgtgtgaattccatgaagcagaaaagttgtat
aaaaacattttaagagaacatcctaattatgttgactgttacttgcgattgggagctatg
gctagagacaaaggaaacttttatgaagcttctgattggtttaaagaagcactgcagata
aatcaggaccatccggatgcttggtcactgattgggaatcttcacttggctaaacaagaa
tggggtccaggacagaagaaatttgagaggatattgaagcagccatctacacagaatgat
acttattccatgttggctcttggcaatgtctggctgcaaactctacatcagcccaccagg
gacagagagaaggaaaagcggcatcaagatcgtgcactagcaatctacaaacaagtactc
agaaatgatccaaagaatttgtatgctgctaatggcataggagctgtattggcacacaaa
ggatatttccgtgaggctcgtgatgtctttgcccaagtgagagaggcaacagcagatatc
agtgatgtgtggctaaatttggcacacatctacgtagaacagaaacaatacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcagaatactgaggtattg
ttgtacttggcccgagcactcttcaaatgtggcaagttacaagaatgcaaacagaccttg
ctgaaggctagacacgtagcacctagtgatactgtcctcatgtttaacgtggccctagtg
ctgcagagactagccacttctgtcctcaaagatgaaaaaagtaacctgaaagaggtacta
aatgctgtgaaggagctggagctagcccacagatacttcagttatttaagtaaagtagga
gataaaatgagatttgatttggcacttgctgctactgaagcaaggcagtgctctgactta
ctgagtcaagctcagtatcatgtggctcgggcacgcaagcaggatgaagaagagagggag
ctacgtgctaaacaagaacaagaaaaggaactactccgccaaaaactacttaaagaacag
gaggagaaacgcctcagagaaaaagaagaacagaagaaacttttggaacaaagagcccaa
tatgtggagaagaccaagaatatcctgatgttcactggagaagtagaaggatcgaaggag
aaaaaacgtggtggtggaaggcgttccaaaaaaggagcaggggaatttgatgagtttgtc
aatgacgacagcgatgaagatctgcccgtgtccagaaagaaaaagaggaggaagggcagt
ggtagtgaacaagatggtgaggaggaggagggagagaggaagaagaaaaagaggagacga
cccccaaagaccgatgaaggcagtgatgatgaagaaaatgaaaatggcccgagacctaaa
aaacgacgtccaccgagagcagagaagaaaaaggctcccaaaccagaacgtctgcctcct
tcaatgaaaggaaagatcaaatcaaaagccataatttcctctagtgatgattcttctgat
gaggataaactcaaaattgctgatgatggacatgccagaaacagcaacagtgattcagat
gatgctgaacaacagcaaaataagcgcgttgtatctgatagtgattctgataacaggaac
aaatctggtagtgaagtaggtagtccacggaggtccagtgcccgcccatctgatgacgag
tctgacagtgacaggtcagtcaggaagaggagacagtcggattcagaccagtctgacaat
gaatctgtgcaatctgggagaagccgctctggtggttcggagaatgaatctcgtccagct
tctcacagtgctgattcagatagagattctgatagaggatctgacaatgagggctctggc
agagggtctggcaatgaatctgaaccagaagcatccaacaatgaggtgtctgaaggtgga
tcagatgatagcgattga
DBGET
integrated database retrieval system
