KEGG   Alligator mississippiensis (American alligator): 102564969
Entry
102564969         CDS       T03087                                 
Name
(RefSeq) C-C motif chemokine 5
  KO
K12499  C-C motif chemokine 5
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04060  Cytokine-cytokine receptor interaction
amj04620  Toll-like receptor signaling pathway
amj04621  NOD-like receptor signaling pathway
amj04623  Cytosolic DNA-sensing pathway
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102564969
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    102564969
   04621 NOD-like receptor signaling pathway
    102564969
   04623 Cytosolic DNA-sensing pathway
    102564969
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102564969
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:amj04052]
    102564969
   00536 Glycosaminoglycan binding proteins [BR:amj00536]
    102564969
Cytokines and neuropeptides [BR:amj04052]
 Cytokines
  Chemokines
   102564969
Glycosaminoglycan binding proteins [BR:amj00536]
 Heparan sulfate / Heparin
  Chemokines
   102564969
SSDB
Motif
Pfam: IL8 CXCL16 RMI1_N_N
Other DBs
NCBI-GeneID: 102564969
NCBI-ProteinID: XP_006264320
UniProt: A0A151NU53
LinkDB
Position
Un
AA seq 91 aa
MKVSVAALALFLISAFSSQASSAPVGLDMMTMCCSGYATRPIPRSHVKEYFYTSSMCTQS
AVIFVTRKNRHICANPEDEWVRKFVNFLEIQ
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaaggtctctgtggctgctcttgctcttttccttatttctgccttctcctcccaggca
tcgagtgctccagttggacttgacatgatgactatgtgctgctctggctatgccacccgg
ccaatcccccggagccacgtgaaggagtatttctacaccagcagtatgtgtactcagtct
gctgtcatatttgtcaccaggaagaatcgacacatctgtgccaaccctgaggatgaatgg
gtccgcaaatttgtgaacttcttagaaatccagtga

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