Alligator mississippiensis (American alligator): 102565116
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Entry
102565116 CDS
T03087
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102565116 (HCN3)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
102565116 (HCN3)
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_N
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
102565116
NCBI-ProteinID:
XP_006264412
LinkDB
All DBs
Position
Un
AA seq
865 aa
AA seq
DB search
MFGSHKAVEIEQRRVQSAGPWIIHPYSDFRFYWDLIMLLLMVGNLIILPVGITFFKDENT
PPWIVFNVLSDTFFLADLVLNFRTGIVVEDNTEIILDPHTIKTKYLKSWFLVDFISSIPV
DYIFLIVDLETQVDSDVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYD
LASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPEDCWVSINHMVNDSWGKQYSHALF
KAMSHMLCIGYGQQAPEGMTDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEK
YKQVEQYMSFHKLPGDMRQRIHEYYEHRYQGKMFDEENILGELSEPLKEEIINFNCRNLV
ANMPLFANADPNFVTAMLTKLRFEVFQPADFIVREGTVGKKMYFIQHGVVSVLTKGNKET
KLSDGSYFGEICLLTRGRRTASIRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAMDR
LDRIGKKNSILLRKRAEHSSGPVNSEMVQQIVKHDCDMARSIQGLQQVAVGRELSGKPVI
WEPLVHAPLQTAAATTNVAIALTHQQSLQAHIFLPPSSIASPLSPDGVLLPRQVRRSQPS
LGGSRPSSVSSPSGAPSHIHTPAAGSPSSPLVQSQSSLESTGQRPGPGAQPLPRGVPKGE
PPAKAKQPLMGSQPQLSKSRGTSASTSLLQQPVGAPSPSSEQALPAGRTLHYSLSRATGS
HISLLMQPQQLVKHRSIQGLPVGRLTQDVRLLSASQPSLPNKISQHMDGGAAQPGRKSAG
NLAHRSSPSVPGLLTKASPGATGQPALPQQAPPGLPAQPGRPLSGASTPQSPVSMPRHAA
GPSRKGSVAFSPEVETGKPKLSSNM
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcagccacaaggcggtggagatcgagcagcgccgcgtgcagtcggccgggccc
tggatcatccacccctacagcgacttcaggttctactgggacctcattatgctcctgctg
atggtggggaacctgatcatcctgcccgtaggcatcaccttcttcaaggacgagaacacg
ccgccctggatcgtcttcaatgtgctctccgacaccttcttcctggccgacctggtacta
aacttccgcacaggcatcgtagtggaggacaacacagagatcatcctggacccccacacc
atcaaaacaaagtaccttaagagctggttcctggttgatttcatctcctccatccctgtt
gactacatcttcctcatcgtcgacctggagactcaggtggactcagacgtctacaagaca
gcgcgggctctgcgcatagtgcgcttcaccaagatcctcagcctgctgcgcctactgcgc
ctctctcgcctcatccgctacatccaccagtgggaggagattttccacatgacctatgac
ctggccagcgctgtggtgcggatcttcaacctaattggcatgatgctactgctatgccac
tgggacggctgcctccagttcctggtgcccatgctgcaggacttccctgaggactgctgg
gtctccatcaatcacatggtgaatgactcatgggggaaacagtactcgcacgccctgttc
aaggccatgagccacatgctgtgcattggctatgggcagcaggccccagagggcatgacc
gacgtctggctcactatgcttagcatgatcgtgggcgccacctgctacgctatgttcatt
ggccatgccaccgccctcatccagtcactggactcatcccgtcgacagtaccaggagaag
tacaagcaggtggagcagtacatgtcgttccacaagctgcctggtgacatgcgccaacgc
atccatgagtactatgagcaccgctaccagggcaagatgttcgacgaggagaacatccta
ggggagctgagcgagccactcaaggaggaaatcatcaacttcaactgccggaacctggtg
gccaatatgccgctgttcgcgaacgccgaccccaacttcgtgacggccatgctaaccaag
ctgcgctttgaggtcttccagcctgctgacttcattgtccgcgagggcactgtgggcaag
aagatgtacttcatccagcacggtgtcgtcagcgtcctcaccaagggcaacaaggagacc
aaactctctgatggctcctactttggggagatctgcctgctgacgcggggccgtcgcaca
gccagcatccgcgctgacacctactgccgcctctactcgctctctgtggacaacttcaac
gaggtgctggaggaataccccatgatgcgcagggccttcgagactgttgccatggaccgc
ctggaccgcatcggcaagaagaactccatcttgctgcgaaagcgggcagagcacagctcg
gggcctgtgaacagcgaaatggtccagcagatcgtcaagcatgactgcgacatggcgcgc
agcatccagggcctgcagcaggtggccgtgggccgggagctgagtggcaagccagtgatc
tgggagcccctggtgcatgcaccactgcagacagctgccgccaccaccaacgtggccatt
gccctgacccaccagcagagcctgcaggcccacatcttcctgcccccctcgtccatagcc
agcccgctttcacctgacggtgtgctgctccccaggcaggtgcgccggtcccagcctagc
ctggggggctcccggccctcttctgtgagctccccatcaggggcaccatcccacatccac
acgccggcggccggctcgccatcctccccattggtccagtcccagtcatccttggagagc
acagggcagagaccaggccctggggcacagcccttgcccaggggggtgccaaagggggag
ccacctgccaaagcaaagcagcccctgatgggctcccagccccagctctccaagtcccga
ggcacctcagcctccacctcactcctgcagcagccagtgggagccccatcacccagctcc
gagcaggcactcccagcagggagaacgctccactacagcctctcccgagccactggctcc
cacatctccctgctgatgcagccacagcagctggtgaagcaccgcagcatccaaggcctg
cctgtcgggcggctcacccaggatgtccggctgctgtcagcctcccagccctctctgccc
aataaaatctcccagcacatggacggaggggccgcccagccgggccggaagtcagcaggg
aacctggctcacaggtcatctccatcggtacctggactcctcaccaaggcatccccgggg
gccacggggcagccagcactgccgcagcaggcaccgccaggcctgccagctcagcccggc
cggcccctgagtggagcctccaccccacagtcccccgtctccatgccccggcatgcagca
ggcccctcccgcaagggctctgtggccttcagcccagaggtggaaacagggaaaccgaaa
ctgtcgtccaacatgtga
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