Alligator mississippiensis (American alligator): 102565129
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Entry
102565129 CDS
T03087
Symbol
RECQL4
Name
(RefSeq) RecQ like helicase 4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amj03032
]
102565129 (RECQL4)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102565129 (RECQL4)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102565129 (RECQL4)
DNA replication proteins [BR:
amj03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
102565129 (RECQL4)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
102565129 (RECQL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
zf-CCHC
zf-CCHC_3
zf-CCHC_5
ResIII
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
102565129
NCBI-ProteinID:
XP_006267397
LinkDB
All DBs
Position
Un
AA seq
1416 aa
AA seq
DB search
MCSPPSTDFGLTWRTRSPSIKTLPLLQEDIEMAPAETKALYREYRALKQARKQPGLEPNA
GCPPAAKEASAVEQPPSSGCWGAHLNRARTAPTLSRQDRNTLQASAQYFGMKLKSNLGAA
LKERPVTLRKPWTPWQKPAVPQSEKSVGVSVAGASPQPTRTPVSESSGDRGSSSEPGEPG
ALLLPPTLSRLAPAILSAGLNPSSQVNKFQQLKQTVAQRLGSLDPGWLDRCQGIQERLKE
DSAHSRGGENRDQPQHSPFPHQAPGASSQPPDNENVPPLGGFSQGGRKHQEPREPSQDIR
SSRGSGMDHSRGDGCRAGTEDEQTTHDPQGSSKVGSGPAASERDLGQLPKEQGSESGAGQ
GADKEEAGTDLAEGERAPSPQDVPSRARKVRATSRKRPQDAVSPDGKAAASKCKRAKVAA
GDDPVPVRRRVRGSSRRPELSTDEDGQPADAGAEQGRDNTVPTENLLGEIEGEGIHRTST
RGRGRRPPPRKGSNFVRLNLKKKSYVKGYALKGNRLRKQVWKQKWQKKGEAFGGGSRGLD
KSADTCFRCGGTGHWASECRGRGPASLAAPPLEENEDPMEEEAPLPTLEEVARLTNTAYS
KSSAGSQGGAQSPGEEEPELYVHRPVYEPPAPPAAMEPLYGLGPDGQLRETPQEVFETLA
EFGYSSFRPGQEVAVMRILSGLSTLVVLSTGMGKSLCYQLPAYLYGKRSRSITLVISPLV
SLMDDQVSGLPACLKAVCIHSNMSKSQREAVMERVKAGKVHVLLLSPEALVGGGGAGSTC
LPSADQLPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVRCLLGLTATATLATA
RDVAHHLGIQEEEGIAVRSAAVPPNLHLSVSVDRDKDQALVSLLQGQPFACLDSVIVYCT
RREETARVATLLRICLQGTVLRGSVATVKQEEDSTRPKKGAKAKNARRPLKWVADSYHGG
MSPAERRRVQNNFMRGELRVVVATVAFGMGLDKPDVRGVVHYNMPKTFESYVQEIGRAGR
DGQPAHCHLFLDPEGRDLHELRRHIYADTVDFFTIKKLVQKVFPPCRCREHHQQHDLSKG
KEVSDVEMLELEMLEQPRVCYRHLRAIPIQQTVESLDMREEAIETLLCYLELHPQRWVEV
LHPTLSSCRLLCYGGPQQLRTVARSCPPVAVFLAQERLAGRDHVQASSVEFDVVALSDSM
GWEVVPVKRALRQLQWSPTLQTGRGRSRVLVEFSEPSFHLRCPGDLTPTELDAMCDFLHR
RVSAREAAALHQLQACFRAFQRVALQTWDLPSQLGAEERSAQLKALLKDYFEKEPVTQGA
EPACKGDEEEVDEDDLSDLKLQDLGAQVRADIRHFLSIRPEEKFSGRAVARIFHGIGSPC
YPAQVYGRDRRFWRRYLHFDFHRLMRLATEEILGWK
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccccgccttctacggactttggcctgacgtggcgaacgaggtccccctcaatt
aagactctgccgttgctgcaggaggacattgaaatggctccagcagagaccaaggcgttg
tacagggagtacagagccctaaagcaagccagaaagcagccaggcctcgaacccaatgca
ggttgcccgccagcagcaaaggaggcctctgctgtggagcagcccccctcctcaggctgc
tggggtgcccacctcaaccgagcccgcacggcccccacgctgagccgccaggaccgcaac
acgctgcaggcatcagcacagtacttcgggatgaagctcaaatccaacctgggagcagcc
ctgaaggagcgtcctgtgaccttgcggaagccctggacgccctggcagaagccagctgtg
ccccagtcggagaagagcgtgggggtcagcgttgcaggggcctccccgcagcccactagg
acacccgtgtcagagagcagcggggaccgtggcagcagctctgagcctggtgagccagga
gccctcctgctcccgccaacactttcacggctggcccctgccatcctctccgccgggctg
aatccgagctcccaagtgaacaaattccagcagctgaagcagaccgtggcccagcgactg
ggctccctggaccccggctggctcgatcggtgtcagggcatccaggagaggctgaaagag
gacagtgctcacagccgtgggggtgaaaacagagatcagcctcagcacagccctttcccg
caccaagcccctggggctagcagccagcccccggacaatgagaacgtcccacctcttgga
ggcttctcgcaggggggcagaaaacatcaggaaccgcgtgagccttcccaagacatccgg
agcagccgggggtctggcatggatcacagcaggggagacggctgcagggcaggcacagag
gatgagcagaccacacacgacccccaggggagcagcaaggtgggctctggccctgctgcc
tctgaaagggacctggggcagctccccaaggagcagggcagtgaatcaggtgctgggcag
ggagcagacaaagaggaagctggcaccgacctggcagagggggaaagagccccttctcca
caggacgtgcccagtcgggcccggaaggtcagagctactagcaggaagaggccgcaggat
gcagtgagccctgatggcaaagctgcagcctcaaagtgcaagcgggccaaggtggcagcc
ggggatgaccctgtcccggtgaggaggagagtgcggggctccagccgcaggccggagctg
agcaccgacgaggacggacagcctgcggatgctggagcggagcagggtcgagacaacacg
gtgcccactgagaacctgctgggggagatcgaaggggagggcattcaccgaaccagcacc
agaggccgtggcagaaggccacccccaaggaagggcagcaacttcgtgcgcctgaacctg
aagaagaaatcgtacgtcaagggctatgcactgaaggggaaccgtctgcgcaagcaggtg
tggaagcagaagtggcagaagaaaggagaagcatttggcggaggcagcaggggcttggac
aagagcgcagacacctgcttcagatgcggcgggaccgggcactgggcctcggagtgcaga
ggcagaggcccagcttccctcgctgccccgccactggaggagaatgaggaccctatggaa
gaggaggccccgttgcccaccctggaggaggtggcccggctgaccaacactgcctacagc
aagagctcagcagggagccaggggggagcccagagccctggggaagaggagcccgagctg
tacgtgcacaggccggtgtacgagccacctgctccccctgcagccatggagcctctctac
ggcctgggcccggacgggcagctgagagagaccccccaagaggtgttcgaaaccctagct
gagttcggctacagctccttccgcccaggccaggaggtggctgtcatgaggatcctctct
ggcctgtccacgctggttgtcctgtccacgggcatggggaagtctctgtgctaccagctt
cccgcctacctgtatggcaagcggtctcggagcatcaccttggtcatctccccactcgtg
tccctcatggacgaccaggtctcagggcttcctgcatgcctgaaggctgtgtgcattcac
tccaacatgtccaagagccagagagaggctgtgatggagcgggtgaaggcagggaaggtg
cacgtcctcctactctcccccgaggccctggtgggcggaggcggggcgggctccacctgc
ctgccctcagccgaccagctgcctccggtggcgttcgcctgcatcgacgaagcccactgc
gtctccgagtggtcccacaacttccgcccctgctacctgcggctctgcaaggttctccgg
gagcgcctgggtgtgcgctgcctgctgggcctcaccgccacggccacgctagccacagca
cgggacgtggcccatcacttgggcatccaggaggaggaggggattgccgtgcgctcggcc
gctgtgcccccaaacctgcacctctccgtctccgtggacagggacaaggaccaggctctg
gtctccctgctgcaggggcagccattcgcatgcctggactcagttattgtgtactgcaca
cgccgcgaggagacggcccgcgtcgccacactgctccgcatctgcctccagggcacggtg
ctgcgggggtctgtggccacggtgaagcaggaggaggacagcacgaggccgaagaagggc
gcaaaggccaagaatgctcggcggccgctgaagtgggtggccgattcctatcatggcggc
atgtcacccgccgagcgccgccgtgtccagaacaacttcatgcgcggggagctgcgggtc
gtggtggccacggtggccttcggcatggggctggacaagcccgacgtgcgtggcgtggtg
cactacaacatgcccaagacctttgagagctacgtgcaggagatcgggcgtgcaggccgg
gatggccagcctgcccactgccacctcttcttggaccccgagggcagggacctgcatgag
ctgcggcggcacatctacgccgacacagttgattttttcactatcaagaaacttgtgcag
aaagttttccctccctgcaggtgccgggagcaccaccagcagcatgacctcagcaagggc
aaggaggtgtctgacgtggagatgctggagcttgagatgctagagcagccccgagtatgc
tacaggcacctgcgtgccatccccatccagcagacggtagagtccctggacatgcgagag
gaggccatcgagaccctgctgtgctacctggagctgcacccccagcgctgggtggaggtg
ctgcaccccaccctctcctcctgccgcctgctgtgctacggaggcccccagcagctccgc
accgttgccaggagctgcccacccgtggccgtgttcctggcccaggagcgcctggcaggg
agggaccacgtgcaggccagctccgtggagtttgacgtggtggcgctgagcgactccatg
ggctgggaggtggtgcccgtgaagcgagccctgcgccagctccagtggagccctacattg
cagacaggccgtggcaggagcagggtcctggtggagttcagtgaaccatccttccacctg
cgctgtcctggcgacctcacacccacagagctggatgccatgtgtgacttcctgcatcgc
cgtgtgagtgcccgtgaggcggccgccctgcaccagctgcaagcctgcttccgcgccttc
cagcgcgtggctctgcagacctgggacctgccctcgcagctcggggccgaggagaggagc
gcccagctgaaggccttgctgaaggactactttgagaaggagcctgtgacccagggggct
gagccagcctgcaaaggggatgaggaggaggtggatgaggacgacctcagtgacctgaag
ctgcaggacttgggagcccaggtccgcgcagacatccggcatttcctgtccatccgcccc
gaggagaagttctccggccgagccgtcgccaggatattccacggcattgggagcccgtgt
taccccgcgcaggtctacgggcgagatcgccggttctggaggagatacctgcatttcgac
ttccaccggctcatgcgcctggccaccgaggagatcctgggctggaagtga
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integrated database retrieval system
