Alligator mississippiensis (American alligator): 102565213
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Entry
102565213 CDS
T03087
Symbol
RC3H2
Name
(RefSeq) ring finger and CCCH-type domains 2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102565213 (RC3H2)
04121 Ubiquitin system [BR:
amj04121
]
102565213 (RC3H2)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102565213 (RC3H2)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102565213 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
102565213
NCBI-ProteinID:
XP_006267312
LinkDB
All DBs
Position
Un
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDATSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHEAPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPETTGKMVPSTNGIASLESGVPQLIPRCADTSLRSLENVKKGGKSGANGHNVSGSPTE
SLSENKIGSPPKTPVSQAAATSAGPPNIGTEMNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRAQMSYEVPQYPQTGYYAPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTSYDDQLRRKPEQW
AQYHTQKTPLVSSTLPMAATSPTPPSPLFNVDFSTEFSESVTDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNTVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDST
SSARYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWSSLD
EGSRLTLNLLSKEIDLRNGESDYTEDCADAKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHSLKQRQKEPLEQKRQSLGEDLVILEEQKAILPVTSCFS
QPITASVSNASCLPISTSVSVGSLILKTAHIMSEDKNNFLKPAVNGKMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagagtttctgtcctgtccaatctgctacaacgag
tttgatgagaacgtgcacaaacccatcagtttaggttgttcccacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcacttcttcaattagttggagcccaggtaccagat
catcagacagtaaagttaagtaacctaggagagaacaaacattatgaggtagcaaagaag
tgcgttgaggatttggcactatacctgaaaccactaagtggaggaaagggtgttgctagt
ttgaatcagagtgcactgagccgtccaatgcaaaggaagctggtgacgctggtaaattgt
cagttggtggaggaggagggtcgggttagagccatgcgtgcagctcgttcacttggagaa
agaactgtaactgaattgattttgcagcaccaaaatcctcagcagctgtctgccaatctt
tgggctgctgtcagggcacgaggatgccagttcctagggccagctatgcaagaagaagct
ttgaagcttgtattactggcactggaagatggctctgcactctcaagaaaagttttagta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatctaaaacgagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcacaaaaagggatgaagat
tcttctctgatgcagctgaaagaggaatttcggagttatgaagctttgcggagggagcat
gatgcccaaattgttcacattgccatggaagcaggccttcgaatatcaccagaacagtgg
tcttcccttctttatggtgacttagcacataagtcacacatgcagtccattattgataag
cttcaatctccagagtcatttgcaaagagtgtacaggagttgacaattgtcttgcaacgt
acaggtgatccagcaaacttaaacagactgaggcctcacttagagcttctagcgaacata
gatcctaatccagatgcaacgtctccaacatgggagcagctggagaatgcaatggtggct
gtgaagactgtggtacatgggctggtggactttattcagaactatagtagaaaagggcat
gaagcaccacagccacaaccaaacagcaaatataaaacaagtatgtgtcgagatctgcga
caacaagggggttgtccacgaggaactaactgtacattcgctcactctcaggaagagctt
gaaaagtatcgtttaaggaacaaaaaaatcagtgcaacagtgagaaccttccctcttcta
aataaagttggcgtaaacagcactgtttcaaccacaacgggaaacgtaatctctgtcata
ggaagccctgaaacaacagggaagatggtgccaagtactaatgggattgcaagtctggaa
agtggtgttccccaattgattccccgctgtgctgacacttccttaagatctttggagaat
gtcaagaaaggggggaaatctggagccaatggtcacaacgtctctggatcccctacagaa
tcattatctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagagatgaattctgtgcctccaaaatccagc
ccatttgtacccagagtaccagtctatcctccacattctgataatgttcagtattttcaa
gatccgcgggcccagatgtcctatgaagttccacagtacccacagacgggatactacgca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagaccgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgccccagtgtatgacagcaggcgtatctgg
cgtccacagatgtacccaagagatgatattattaggagcaattctttacctccaatggat
gtgatgcactcatctgtctatcagacatcattgcgtgagagatataactctttggatggg
tattactctgtggcttgccagcctccaaatgagcaaaggactgtgcctttaccaagggag
ccttgtggtcacttgaagaccagttatgatgatcagttacgacgaaagccagagcagtgg
gcacaataccacacacagaaaacccctcttgtatcctcaacgcttcctatggcagcaaca
tctccaacaccaccttctcctctcttcaacgtggacttcagcacagagttttcagagagt
gttactgacttgagtggtactaaatttgaagaagaccatctttcccactactcaccctgg
tcctgtggcactattggctcctgcataaatgctatcgattcagagcccaaggatgtaatc
gccaattcaaatactgtgttaatggatttggacagtggagatgttaaaaggagagtgcat
ttgtttgaaactcaaagaagggcaaaagaagaagatcctatcattccctttagcgatgga
ccgatcatctccaagtggggtgcaatctccagatcatctcgcacaggttatcacacaaca
gaccctattcaagccactgcttcccaaggaagtgctactaagcccataagtgtatcagat
tatgtcccatatgtcaatgctgttgattcaagatggagttcttatggctcagattccact
tcatcagcgcgctatatagaacgggataggttcatagtgaccgatttatctggtcacaga
aagcattccagcactggagatttactgagtattgaactacagcaggccaaaagtaattca
ttgttacttcagagggaggctaatgcgctagccatgcaacagaagtggagttctctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
agtgactatactgaagactgtgcagatgcaaagccagatcgagacattgaattagagctt
tcagcccttgataccgacgaacctgacggacagggtgaacaaatagaggagatcctggac
atacagctaggtatcagttcacaagaagatcagctgctcaatgggacaactgtagagaat
ggtcattcactaaagcagcgccaaaaggaacctttggagcagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaagcaatcctgcccgtaacttcttgcttcagt
cagcccatcacagcatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaacaacttttta
aagccggctgtgaatggcaagatggttaacagctga
DBGET
integrated database retrieval system
