Alligator mississippiensis (American alligator): 102565278
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Entry
102565278 CDS
T03087
Symbol
USP30
Name
(RefSeq) ubiquitin specific peptidase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102565278 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
102565278 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102565278 (USP30)
04121 Ubiquitin system [BR:
amj04121
]
102565278 (USP30)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102565278 (USP30)
Peptidases and inhibitors [BR:
amj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102565278 (USP30)
Membrane trafficking [BR:
amj04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
102565278 (USP30)
Ubiquitin system [BR:
amj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102565278 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
102565278
NCBI-ProteinID:
XP_006264241
LinkDB
All DBs
Position
Un
AA seq
509 aa
AA seq
DB search
MLAAPGAAGPGRAVRRLLRAGLALRCKAMKNWGVIGGVAAALAAGIYVLWGPIADRKKRR
KGLVPGLLNLGNTCFMNSLLQGLSACPSFIKWLEEFTSQYKTDQPEPSERRYLSLTLLHL
LKALSCQEVTEDDVLDASCLLEVLRMYRWQISSFEEQDAHELFHVLTSSLEDERDRWPRV
THLFDVHSLEQPETTQKQISCRTKGSLPPMANHWKSQHPFHGRLTSNMVCKHCEHQSPVR
YDTFDSLSLSIPAAMWGRPLTLDHCLHHFISSESVRDVVCDNCTKIQAEGIRNGQTIENQ
KTTFVKQLKLGKLPQCLCIHLQRLSWSNQGTPLKRHEHVQFNEFLIMDIYKYHLPAHKSS
KHDPNQKDSAGTSSETKDGLAVRTSDGEQPCSTKSLFLNGACSPSLLPSPIPFPLASVPD
CSSPVYLYRLMAVVVHHGDMHSGHFVTYRRSPSSPKSPLSVSNQWLWISDETVRKASLQE
VLSSSAYLLFYERVHSRAQHPSPELRAEE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgcgccgggcgccgcggggccgggcagggcggtgcggaggctgctgcgggcc
gggctcgccctcaggtgcaaagcgatgaagaactggggcgtgatcggcggcgtggcggcg
gcgctggcggccggcatctacgtgctgtgggggcccatcgccgacaggaagaagcgcagg
aaagggcttgtgcctggccttctcaacctaggaaacacctgtttcatgaactccttgctg
cagggcttgtcagcgtgtccgtcgttcatcaagtggttggaggaatttacatcccaatac
aagacagaccagcctgaaccatcagagcgccgatatttgtcccttaccttgctgcacctc
ctgaaagccttatcctgccaagaggtcacagaagatgatgttctggatgcaagctgctta
ctagaagtgttaaggatgtacaggtggcagatttcttcctttgaagaacaggatgctcat
gagctgttccatgtcctcacgtcttccttggaggatgaacgggatcgctggccacgggtc
acacacctgtttgacgtgcattcgctagaacagccagaaacaacccaaaagcaaataagc
tgcagaacaaaaggatcacttccccctatggcaaatcactggaaatctcagcatcctttc
catgggagactgaccagtaacatggtttgcaaacactgtgaacaccagagtcctgtgagg
tatgacacatttgacagcctttcgctgagtattccagcagccatgtggggtcgccctttg
acactggaccactgcctccatcatttcatctcctctgaatcagtgagggatgtcgtctgt
gataattgcactaaaattcaggcagaagggatacggaatgggcaaaccatagaaaaccag
aagacaacatttgttaaacagttaaagctaggcaagctgcctcagtgtctgtgtatccat
ctgcaaaggctgagctggtcaaaccaaggcacacctctgaaacgtcatgaacacgtgcag
ttcaatgagttcctgatcatggacatctacaaatatcatctccctgcccataagtcaagt
aaacatgatccaaaccagaaggactctgcagggacatcttctgagacaaaggatggactg
gccgtgagaacctcagatggggagcagccgtgtagcacaaaatcgctctttctgaatggg
gcctgctctccttcactcctgccatctcccatacctttccctcttgcctccgtccctgat
tgcagttccccagtatacctctaccgcctgatggccgttgttgtgcatcatggagacatg
cattcgggacactttgtgacctaccgccgctctccgtcctctcccaagagccctctctcg
gttagtaaccagtggttgtggatttcagatgagacggtgcgcaaagcgagcctgcaggag
gtcctttcctccagtgcttacctgctgttttacgagcgtgttcactcaagagcacaacac
ccgagtccagagctcagggctgaggaatga
DBGET
integrated database retrieval system
