Alligator mississippiensis (American alligator): 102565394
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Entry
102565394 CDS
T03087
Symbol
RBCK1
Name
(RefSeq) RANBP2-type and C3HC4-type zinc finger containing 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04217
Necroptosis
amj04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
102565394 (RBCK1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102565394 (RBCK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102565394 (RBCK1)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
102565394 (RBCK1)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
102565394 (RBCK1)
Multi subunit type E3
LUBAC complex
102565394 (RBCK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
IBR
zf-RING_11
zf-RING_5
IBR_1
ubiquitin
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
102565394
NCBI-ProteinID:
XP_019341056
LinkDB
All DBs
Position
Un
AA seq
512 aa
AA seq
DB search
MEETTRKAEELAQRLAEAIESGDQVLACQCAGKLAELAVSMSVRLKEQAYPQQEIRLWVG
VEDAQMHTVPIHLRVRPHMTLASLKDMVFAQYGFPPSVQRWVIGQRLPQDQETLHYNGIQ
RDGDCAFLYLLSARQAQLGRDPALPLHPPDLGLGNQVLQARGGPEQVDAAPRVTQAGPDV
EEPSWGEAAALPKPPQVGWVCPRCTYVNKPTRPGCELCCQERPEGYCVPDGYQPDAAEQA
RLRGEEEALQQYQQVKEQQQKENYEQLLQLDGQSLVPADAAIECPICLGIVPPGEGVTLR
ECLHAFCRDCLKGTILNSPEPEVPCPYIDKNYSCMGQLLEREIKALLSPEEYERFLDLGV
SIAETRSPCSYHCKTADCRGWCFFEDDVNEFSCPVCLKVNCLLCQAIHENMNCKEYQDDL
QARAENDQAARQTSEMLTMMVQRGEAMHCPSCRIVVQKKDGCDWIRCTVCHTEICWVTKG
PRWGPAGPGDTSGGCRCRLKGAPCHPHCQNCH
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacgacgaggaaagcggaggagctggcccagcggctggccgaggccatcgag
agcggggaccaggtgctggcgtgccagtgcgccggcaagctggcggagctggccgtctcc
atgagtgtgcggctgaaagagcaggcctacccccagcaagagatacggctgtgggtgggg
gtggaggacgcccagatgcacacggtgcccatccacctgcgggtccggccccacatgacc
ctggcatcgctcaaggacatggtgttcgcgcagtacgggttcccgcccagcgtccagcgg
tgggtcatcgggcagcggctgccccaggaccaggagacgctgcactacaacggcatccag
cgggacggcgactgcgccttcctctacctgctctcggcccgccaagcccagctcggcaga
gaccctgccctgcccctccaccccccagacctggggctgggcaaccaggtgctgcaggcg
cgcgggggcccggagcaggtggacgcagcgcccagggtgacgcaggcggggccagacgtg
gaggagccctcgtggggggaggcagcggccctgcccaagcccccccaggtgggctgggtc
tgcccgcgctgcacctacgtgaacaagccgacgcgccccggctgcgagctgtgctgccag
gagcgccccgagggctactgcgtgcccgacggctaccagcccgacgcggcggagcaggcg
cggctgcggggcgaggaggaggctctccagcagtaccagcaggtgaaggagcagcagcag
aaggagaactacgagcagctgctgcagctggatgggcagagcctggtgccggccgatgct
gccatcgagtgccccatctgcttgggcatcgtgccgcccggcgagggcgtgaccctgcgc
gagtgcctgcacgccttctgcagggactgcctgaagggcacgatcctgaacagcccggag
cccgaggtgccctgcccttacatcgacaagaactactcctgcatggggcagctgctggag
cgggagatcaaggcgctcctgagcccagaggagtacgagcgcttcctggacctgggcgtc
tccatcgccgagacccgcagcccctgcagctaccactgcaagacggccgactgccgcggc
tggtgcttcttcgaggacgatgtcaatgagttctcctgccccgtgtgcctgaaggtcaac
tgcctgctgtgccaggccatccacgagaacatgaactgcaaggagtaccaggacgacctg
caggcccgggctgagaacgaccaggccgcgcggcagaccagcgagatgctgacgatgatg
gtgcagcgcggcgaggccatgcactgccccagctgccgcatcgtggtgcagaagaaggat
ggctgcgactggatccgctgcaccgtgtgccacaccgagatctgctgggtcaccaagggg
ccgcgctgggggccggcgggtcccggcgacacgagcgggggctgtcgctgccggctgaag
ggcgcgccctgccacccccactgccagaactgccactag
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