Alligator mississippiensis (American alligator): 102565417
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Entry
102565417 CDS
T03087
Symbol
FAN1
Name
(RefSeq) FANCD2 and FANCI associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102565417 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amj03400
]
102565417 (FAN1)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
102565417 (FAN1)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
102565417 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
CAV_VP3
Fea1
PRP21_like_P
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
102565417
NCBI-ProteinID:
XP_006259814
LinkDB
All DBs
Position
Un
AA seq
1051 aa
AA seq
DB search
MSEAGSPEEKRPRRSLSLNKNRKKNANKNNYTENNGVPAVPSSSSILSFFSSTPPTKLTC
PICGLMVPRYEINKHIDEMCPKNQGDNGETLVDSPCSSSASDSNSSPYFAKNTSTPEKKT
SPCESNSLEMKVSVEQKTSPYFKKSSDSACSVHNEARVQTVKIISLGNLSSKLSRRHRIQ
GGKLTVQSEGNSLLQAVHEVCDNSVELDSEKTCFGDGSQKENQFALIGRGDMHILKDSLT
KPEIQGETHLRGKEIPRDGLVASAQVLALSGSINTRDVTFVAGNTNENSCSEGMVSSHDK
SAPHPVNHNKGESCDGSEAEMQSHTKTVPSSGTQVICDNHTQNCPEKGDMTVLPMEVHGG
MRNEMLYTASSEPLEEVDFQGPSSGILDKISGLSSTSDSSDHPYYLQNFLMVLRAVLEND
DDLRLFDEQDTKIITTFYQLSAAGQKLYVRLFQRKLNWIKINKIEYAEISTDLRPVIEEL
VEGGFLQTESTLEDLSEGLDLLSAPELKTLAKTFHLPNPNAQKQQLLEDFIRLAKQRSIF
SRGQAGIGAVILKRAKNLAGKCVKVCRGPRAVFSRILLLFSLTDSVEDEEAASGGQGQLS
TVLMVNMGHTVFPSYTVNRKTAIFQDREDLIRYATAAHMSNDIATAMANGNWAEANHLYM
CAKETWHGMKNLTSLRYHKVLPEYLRHFTVGWVYTRILSRGVEILQRLHMYEEAVKELQN
LLSQEVYCTDSRGRWWDRLALNLHQHLKETKKAIECIRKGLADSFVRTGHRLSLYQRALR
IRDSSSNKKFRSLFQELQVMIVEDVTHVTIKGKMYPQTGLGKSVFLMEDVDDEEKGEDSA
VSTVICSVEELALTHYKQNGFDQGIHGEGSTFSTLYGLLMWDIIFMDGIPDVFRNSYQAF
PLDLCTDSFYENRRDAIEARLQLLHAASSETLKELLADVWSTQEGKVSALVSWNRFTSLQ
QAQSLVSCLGGPFLSGVCRRLARDLRHCRGGLPDLVVWSTHDHCFKLVEVKGPNDRLSHK
QMLWLSELKQLGAAVEVCHVAAVGAKSKRLS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagctggatctccagaagaaaaaagaccccgaagaagcttgtctctgaataaa
aacagaaaaaagaatgcaaacaagaacaattacacagaaaataatggagtaccagctgta
ccttccagttcttccatcctttcattttttagcagtacacctcccaccaaactcacatgc
cccatttgcgggctgatggttccacgatatgagatcaacaagcatatagatgaaatgtgc
ccaaagaatcagggtgataatggagagactctggtggattcaccatgtagtagttctgcc
agtgacagtaattccagcccgtactttgcaaagaacacctcaactccagagaagaagaca
agtccatgcgaaagtaactcattggaaatgaaagtaagtgtagaacagaagaccagtccc
tactttaagaagagcagtgattcagcatgcagtgttcataatgaggcaagggttcaaaca
gttaaaatcatctctttgggaaacttgtcatccaaattatctagaaggcaccgtatccaa
ggaggaaaactaacagttcagagtgaggggaattctttgctgcaagcagttcatgaagtg
tgtgacaactctgtagaactggacagtgaaaagacttgttttggggatggctctcagaaa
gagaatcagtttgctttgatagggcgcggggacatgcacattctgaaagacagtttaaca
aagcctgaaattcagggggaaacacatctgcgtggtaaagagatacccagggatggcctt
gtggcttctgctcaggtattagcgctgtcaggtagtattaatactagagacgtaacattt
gttgcagggaataccaatgaaaacagttgttctgaaggcatggtgtcaagtcacgacaaa
tctgcaccacatccagtcaatcataataaaggagagtcgtgcgatggttcagaagctgaa
atgcagtcccatactaagactgtgccttcatctggtacccaagtgatatgtgacaaccat
acacagaattgcccagagaagggtgatatgactgtacttcctatggaagttcatggaggc
atgaggaatgagatgctttatactgcttcttcagagcctttggaagaggtggattttcag
ggtccttctagtggcattttagacaaaataagtggactcagttccacatctgattcttct
gaccacccatattatctccagaacttcttgatggtcctgcgagcggtcctagagaatgat
gatgatctgagactttttgatgagcaagacaccaaaattatcactacgttctaccagttg
tcagctgctggacagaaattatatgtcagactttttcaacgcaaactgaattggataaaa
attaacaaaatagagtatgcagagatcagcacagatttgcggccagtaattgaagaactg
gttgaaggaggctttctgcaaacagagtctacattagaagacctttctgaggggctggac
ttgctttctgctcctgagctaaaaacattagcaaagacctttcacctgccaaacccaaat
gctcagaaacaacagctcttggaggattttatcagactggcaaaacaacgttcaatcttc
agcaggggtcaggctggcattggggcagtgattttgaaaagggccaaaaaccttgctggg
aagtgtgtaaaagtctgtagaggcccccgggctgtattctctcgaattctgctgctattc
tcattgactgattcagtggaggatgaggaagctgctagtggtggccaaggccaactttcc
acggtgcttatggtaaacatgggccatacagtgttccccagctacactgtaaataggaaa
acagcaattttccaggacagagaagatctcatcaggtatgcaacagctgctcacatgtca
aacgatatagccactgcaatggctaatgggaattgggcagaagctaatcatctctacatg
tgtgcaaaagaaacctggcatggaatgaaaaatctcacctctctcaggtaccataaagtc
ttacctgagtacctgcgacattttactgttggatgggtgtataccagaatcctttctcgt
ggggttgaaattttgcaaagacttcacatgtatgaggaagctgtgaaggaactgcagaat
cttttgtcccaggaagtatattgtaccgacagcagaggacgatggtgggatcgactggct
ctgaatttacaccagcacttgaaagaaaccaagaaggccattgaatgcattagaaaaggg
ctggcagactcatttgtgcgcacaggccaccggctctccctgtaccagcgagcactgaga
ataagagactcatcaagcaacaagaagttcaggagcctctttcaggagctgcaagtcatg
attgtggaagatgttacacatgttacaatcaaaggaaaaatgtatccccaaaccgggttg
ggaaaatctgtgtttctaatggaggacgttgatgatgaagagaaaggcgaggactctgct
gtgtccacagtcatatgctctgttgaggagctggcattaacccattacaagcagaatggc
tttgatcagggaattcatggggaaggatcaacttttagtacgctctatggccttctaatg
tgggacatcattttcatggatggcataccagatgtcttcaggaattcctatcaggcattc
cccctggatttatgcactgacagcttctatgagaacagaagagatgccattgaagccaga
ctccaattgctgcatgcagcttcttccgagactttgaaggagttgcttgctgatgtctgg
agtactcaagagggaaaagtttcggccctagttagttggaaccgatttacttccctccag
caggctcagagtttagtgtcctgtttgggaggacctttcttaagtggtgtgtgtagacgg
ctcgccagagatctgcgccactgcagagggggtcttcctgatctagttgtgtggagcact
catgatcactgcttcaagctggtggaagtgaaggggcccaacgatcgcctttcacacaag
cagatgctctggctgagtgagctgaagcagctgggagctgcagtagaggtctgtcatgtg
gctgcagttggagccaagagcaagcgcctcagttga
DBGET
integrated database retrieval system
