KEGG T03087: 102565459

Alligator mississippiensis (American alligator): 102565459

Entry

102565459         CDS       T03087

Symbol

POLR2G

Name

(RefSeq) RNA polymerase II subunit G

K03015

DNA-directed RNA polymerase II subunit RPB7

Organism

amj Alligator mississippiensis (American alligator)

Pathway

amj03020

RNA polymerase

amj03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:amj00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102565459 (POLR2G)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102565459 (POLR2G)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amj03021]
    102565459 (POLR2G)
   03019 Messenger RNA biogenesis [BR:amj03019]
    102565459 (POLR2G)
   03400 DNA repair and recombination proteins [BR:amj03400]
    102565459 (POLR2G)
Transcription machinery [BR:amj03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102565459 (POLR2G)
Messenger RNA biogenesis [BR:amj03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102565459 (POLR2G)
DNA repair and recombination proteins [BR:amj03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102565459 (POLR2G)

SSDB

Motif

Pfam:

SHS2_Rpb7-N S1

Other DBs

NCBI-GeneID:

102565459

NCBI-ProteinID:

XP_019352782

UniProt:

A0A151MSQ9

LinkDB

Position

AA seq 137 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTVDEVSWG

NT seq 414 nt +upstreamnt +downstreamnt
atgttttaccacatctccctggagcacgagatcctgctgcacccgcgctacttcgggccc
aacctgctcaacacggtgaagcagaagctcttcaccgaggtggagggcacctgcacgggc
aagtacggcttcgtcatcgccgtcaccaccatcgacaacatcggggcaggcgtcatccag
ccgggccgcggcttcgtgctctaccccgtcaagtacaaggccatcgtcttccggcccttt
aaaggcgaggtggtggatgcggtggtgacccaggtcaacaaggttgggctcttcactgag
atcgggcccatgtcttgcttcatctcccgccattccatcccctctgagatggagttcgac
cccaattccaaccccccctgctataaaacggtggacgaggtgagctggggctga

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