Alligator mississippiensis (American alligator): 102565482
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Entry
102565482 CDS
T03087
Symbol
COL10A1
Name
(RefSeq) collagen type X alpha 1 chain
KO
K19479
collagen type X alpha
Organism
amj
Alligator mississippiensis (American alligator)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102565482
NCBI-ProteinID:
XP_006278461
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All DBs
Position
Un
AA seq
678 aa
AA seq
DB search
MQLHTTLLLLLSLTIVHGGDGFFSEQYQKQSSVKGPPRFLPFNVKSQGIQMRGEQGLQGP
PGPAGPRGYPGPAGKPGIGSQGPQGPPGPPGPPGFSAVGKPGMPGLPGKPGDRGLTGEKG
EAGPLGPVGPRGPQGPPGIPGPAGLSAVGKPGPQGPPGVQGPRGLTGEKGEPGIPGMNGL
KGENGYGVPGRPGDKGLPGPQGPPGLPGPAGLGKPGENGLPGQPGAKGDLGLPGAPGPAG
IPGHQGPPGEPGTPGVGKPGPMGPPGLAGIPGAKGLPGPPGMPGSSGLPGFGKPGLPGMK
GHRGPEGLPGVPGMKGEQGPVGVPGEPGPAGPPGNMGPQGLRGLAGENGLPGPKGDVGPS
GPAGYPGPKGDRGLPGLDGKPGYPGEQGLAGPKGHPGLSGPKGDTGHAGPPGLPGPVGTP
GIKGVPGINGEQGPRGPSGIPGIRGPIGLPGIPGVPGAKGEPGAPGLPGPAGIATKGLNG
PMGPPGPPGPRGNNGEPGQPGPPGPPGPPGQSVLPQMPDSYIKAGESQSLAGVPVMKGGV
NQGLTGMPASAFTVILSKAYPAATVPIKFDKILYNRQQHYDPRTGIFTCRIPGLYYFSYH
VHVKGTNVWVALYKNGSPIMYTYDEYKKGYLDQASGSAVIDLMENDQVWLQLPNSESNGL
YSSDYVHSSFSGFLFAHM
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcagttacacactactttgctgctgttgctttctctgaccattgtccatggtggtgat
gggtttttttctgaacaatatcaaaaacaatccagcgtgaaggggccaccacgcttctta
ccatttaatgtaaaaagtcaaggtatacagatgagaggagagcaaggacttcaaggtcca
cctggccctgctggaccaagaggatacccaggccccgcagggaagccagggattggaagt
caaggtcctcaagggccccctggtcccccaggaccacccggattttctgctgttggaaag
ccaggcatgccaggtttgccaggaaagccaggagacagaggattaactggtgaaaaagga
gaggctggacccctcgggcccgtcggaccaagagggccacaagggccacctggaattccc
ggccctgctggactttctgctgttggcaaaccaggacctcaaggaccaccaggagtgcaa
gggccaagggggctcacaggagagaagggagaaccaggtattcctggtatgaatgggcta
aaaggagaaaatggatatggagttccaggtcgcccaggtgacaaagggcttccaggacca
cagggacccccaggcctccccggacctgctgggttagggaagccaggtgaaaatgggctt
ccaggtcagccaggagcaaaaggtgatctgggtttaccaggtgcaccaggaccagcaggt
atcccaggccaccaaggtcctcctggggaacctggaacaccaggagtaggaaagcctgga
ccaatgggaccaccaggattagcagggattcctggagcaaaaggattacctgggcctcca
ggcatgcctggatcttcaggtctcccaggatttggaaagccagggctaccaggtatgaaa
ggacacagagggcctgaaggcctccctggtgttccaggcatgaaaggggagcaaggccca
gttggtgtgccaggagagccagggccagctggaccacctggaaacatgggacctcaagga
ctcagagggctagcaggtgaaaatggcctacctgggcctaaaggggatgtaggcccttca
ggtcctgcaggatacccaggacctaagggtgacagaggtctaccaggattagatggaaaa
ccaggatatccaggggaacaaggtcttgcaggtcctaaggggcacccaggtttgtcagga
ccaaaaggtgacactggtcatgcagggccacctggcctccctggtccagtgggtacacca
ggaattaaaggagtaccaggaattaatggtgagcaaggcccaagaggaccttctggaata
cctggtataagaggtccaattggacttccaggcattccaggtgttcctggtgctaaaggg
gaaccaggggcacctggattgccaggcccagctggtattgctacaaaaggtttgaatgga
cccatggggccgcctggtcccccaggcccaagaggcaataatggagagcctgggcaacct
ggcccaccaggtccaccaggtcctcctggccaatcagtattgccacagatgccagacagt
tacataaaagcaggagagagtcaaagtctagcaggagtacctgttatgaaaggaggagta
aaccaaggtttaacaggcatgccagcatcagctttcactgtcattctttccaaagcctat
cctgcagcaactgtccctatcaaatttgataaaatcctatataacaggcaacaacactat
gatcccagaacaggaatcttcacctgtagaatcccaggactttattacttctcttatcac
gtacatgtaaaaggaacaaatgtgtgggttgcgctatacaagaatggctcgccaatcatg
tacacctatgatgagtacaagaaaggataccttgatcaggcttctggaagtgctgtcatt
gatctcatggaaaatgatcaggtctggctacaactgcccaattccgaatcaaatggcttg
tattcctctgattatgttcactcttctttctcaggattcttatttgctcatatgtaa
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