Alligator mississippiensis (American alligator): 102565598
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Entry
102565598 CDS
T03087
Symbol
LRP5
Name
(RefSeq) LDL receptor related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04150
mTOR signaling pathway
amj04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102565598 (LRP5)
04150 mTOR signaling pathway
102565598 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102565598 (LRP5)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
102565598 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
102565598
NCBI-ProteinID:
XP_014459730
LinkDB
All DBs
Position
Un
AA seq
1616 aa
AA seq
DB search
MEAAPPPRPLLLLLLLLLPRDSGSAAASPLLLFANRRDVRLVDAGRTKLESTIVVSGLED
AAAVDFQYSQGIVFWTDVSEEAIKQTYINQTGNVVQNVIISGLVSPDGLACDWIGRKLYW
TDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAGMDSS
TRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALT
LSGDTLYWTDWQTRSIHACNKRTGEKRREILSALYSPMDIQVLSPERQPYFHTPCEEKNG
GCSHLCLLSPRDPFYSCACPTGVQLEHDGKTCKAGAEEVLLLARRTDLRRISLDMPDFTD
IILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGSGAQTLVTTEINHPDGIAVD
WVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMGYMYWTDWGESPKI
ECAYLDGSERRVLVNTSLGWPNGLALDLEEDKLYWGDAKTDKIEVINVDGTMRKTLLEDK
LPHIFGFTLLGDYIYWTDWQRRSIERVHKTRASRDIIIDQLPDLMGLKAASVTKVFGTNP
CAENNGGCSHLCFFTPQETRCACPLGLELLSDMKTCIIPEAFLVFTSRAAIHRISLETNN
NDVAIPLTGVKEASALDFDVSDNRIYWTDISLKTISRAFMNGSSVEHVIEFGLDYPEGMA
VDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTEWGGKP
RIVRAYMDGTNSITLVDKVGRANDLTIDYADQRLYWTDLDTSMIESSNMLGQEREIIADD
LPHPFGLTQYSDYIYWTDWNLHSIERADKTNGKNRTLIQGHLDFVMDILVFHSSRQDGLN
DCVQNNGHCGHLCLAIPNGYRCGCAAHYALDPNSRNCSSPSSFLLFSQKSAISRMIPDDQ
QSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNIIKRAKDDGTQPFTVMSTPNQSQNP
EKQPHDLSIDIYSHTLYWTCEATNSVNVHRLNGEAIGMVLRGDHDKPRAIVVNAERGYMY
FTNMQERAPKIERAALDGTEREVLFTTGLIRPVALVIDNKLGKLFWVDADLKRIESCDLS
GANRVTLEDSNILQPMGLTVLGNHLYWIDRQQQMIERVEKTNGSRRSRIQGRIAHLTGIH
AVEELDMEEFSAHPCSRDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPD
QFTCATGEIDCIPMAWRCDGFPECDDQSDEDSCPICSAAQFQCEKGQCIDARLRCNGEID
CQDKSDEADCDTICLPNQFRCASGQCILRKQQCDSFPDCIDGSDELMCEKNKPPADEPQP
HSSAIGPVIGIILSLFVMGGMYFVCQRVVCQRYAGPNGPFPHEYVSGTPHVPLNFIAPGS
SQHGTFTGKDGISCGKSMISSMSLMGGSSGAPLYDRNHVTGASSSSSSSTKATFYPQILN
PPPSPATDRSLYNTEMFYSSNIPSTTRSYRPYLIRGIAPPTTPCSTDVCDSDYTTSRWKT
NKYYIDLNSDSDPYPPPPTPRSQYMSAEESCPPSPATERSYFHLYPPPPSPCTDSS
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccgccgccgcggccgctgctgctactgctgctgctgctcctgccccgc
gactcgggctcggccgcggcctctccacttctgctttttgccaaccgtcgggatgttaga
ctggtggatgctggaagaacaaagctggagtctacaattgtagtcagtggcttagaggat
gctgctgcagttgactttcagtactcacaaggcattgtcttctggacagatgtgagtgaa
gaagccatcaagcaaacctacattaaccaaactggaaatgtggtgcagaacgttattatt
tctggtctggtttccccggatggcctggcatgtgattggattgggagaaaactgtactgg
acagactcagaaaccaataggatagaggtagctaatctcaacggtacatcaaggaaagtt
ctcttctggcaagacctggaccagcccagagcaatagctttggatccagcacatgggtat
atgtattggacagactggggtgaaacacccagaatagaacgggcaggaatggatagcagc
acacggaaaataattgttgattcagacatttattggcctaatggactcacgatagatctt
gaggagcagaaactgtactgggctgatgcaaagctgagtttcattcatagagcaaatctg
gatggttcctttaggcaaaaggttgttgaaggtagtctcactcatccgtttgcgctgacc
ttgtctggggacacgctgtattggacagattggcagactcgctccattcatgcctgtaac
aaaaggactggagaaaaaaggagagaaatattgagtgcactttactccccaatggacatc
caggtcttgagtccagagcgacagccatactttcatactccctgtgaagaaaaaaatggc
ggctgctcccacctgtgccttctgtctcccagagaccccttctacagttgtgcctgtccc
actggagtgcagctggaacatgatggcaagacttgtaaagcaggtgctgaggaagtctta
ttgcttgcaagaaggacagatttgcgaagaatctccttggacatgccagatttcactgat
atcattctacaaatagataatatcaggcatgcaattgcaatagattacgatcctgttgaa
ggatatatatattggactgatgacgatgtcagggcgattcgtcgggcctacctcgatggc
tctggagcacagaccctagtgaccacagaaatcaaccaccctgatggcatagcagtggat
tgggtggctaggaacctgtattggactgacacaggaacagatcgcattgaagtgactcga
ttgaatgggacatccagaaagatcctgatatctgaaaatctagatgaacccagggcaata
gtgctgaatcctgtgatgggctacatgtactggacagactggggtgaaagtccaaagatt
gagtgcgcttatctggatggctcagagaggagggtcctggtaaacacttccctaggctgg
cccaatggcttggcactggatcttgaagaagacaaactctactggggagatgcaaaaacg
gacaaaattgaggtcataaatgttgacggaacaatgaggaagaccctcctagaagataaa
ctgccacatatatttgggtttacgctgctgggggactacatctattggacagactggcag
aggcgaagcattgaaagagttcacaaaacaagggcaagcagggatatcataatagaccag
ttgccagacctaatgggtctcaaagcagcaagtgtcaccaaagtgtttggaaccaaccca
tgtgctgagaataatggcgggtgcagccacctgtgtttcttcacacctcaggagaccaga
tgtgcttgtcccttaggactggagttgctgagtgacatgaagacctgtatcatccctgaa
gccttcctggttttcactagcagagcagcaatccataggatttcccttgaaaccaacaat
aatgatgtagctattcctcttaccggagtcaaggaggcatccgctttggattttgatgtg
tcagataacagaatctactggacagatattagtttgaagaccataagccgagctttcatg
aatgggagctctgtggagcacgtcattgagtttgggttagattaccctgagggaatggct
gtggactggatgggaaagaacctttactgggcagatactggaactaaccgaattgaagtt
gcacgcctggatggacaatacagacaggttcttgtgtggaaagatttagataacccaagg
tctttagctcttgatcctactaaagggtacatgtactggactgaatggggaggtaaacca
aggattgttcgggcatatatggacggaacaaatagcatcactttggtggacaaagtggga
cgtgccaatgacctaactattgactatgcagaccaaaggctatattggacagacttggac
acaagcatgattgagtcatcaaacatgttaggtcaagaaagggaaataatagcagatgat
ctgcctcatccatttggattaacccaatacagtgattacatctactggacagactggaac
cttcatagtatagaaagagccgacaagacaaatggaaagaaccgaacactaattcagggc
cacctggattttgtgatggatatattggtcttccattcatcacgccaggatggcttaaat
gactgtgtgcaaaataacggacactgtggtcatttgtgccttgccatacccaatgggtac
agatgtggctgtgctgctcattatgccttggaccccaacagcaggaattgcagttcaccc
agcagcttcttactgttcagccaaaagtctgcaatcagtcggatgatcccagatgaccag
caaagtccagatatcatcctccctatgcatgggctaagaaatgtcaaagccattgattat
gatcccttagacaaactgatttattgggtggatggacgtcaaaacataattaaaagagca
aaagatgatggtacccagcccttcactgttatgagcactccaaaccaaagccagaatcca
gagaagcaaccacatgatctgagcatcgatatttatagtcacaccttatattggacctgc
gaggccacaaattcagtcaatgtccacaggctgaatggtgaggcaattggaatggtgtta
cgaggagatcatgacaagccaagagccatagtagttaatgcagagcgagggtacatgtac
ttcactaacatgcaagaacgagccccgaagatcgagcgtgcagccctggatggcacagag
agggaagtgctctttactactgggctgatccgacctgttgcactagtaattgacaacaag
cttgggaaactcttctgggtggatgcagatctcaaacgcatcgaaagctgcgatttgtca
ggagcgaaccgtgtgaccctggaggactccaacatcctgcagccaatgggcctgactgtt
ttggggaatcacttgtactggattgatcgccagcagcagatgattgagagagttgagaaa
acaaatggatccaggaggtcgcggatccaaggtcgaattgctcacctgacaggcattcat
gctgtggaagagctcgatatggaagaattttccgcacacccctgctcccgtgacaatggt
gggtgttcacacatctgcattgcaaaaggggatggaactccaagatgctcgtgcccagtg
caccttgtacttctacagaacctcttaacatgtggagaacctccaacttgttccccagat
cagtttacctgtgcaactggtgagattgactgtatcccaatggcatggcggtgtgatggc
tttccagaatgtgatgatcagagtgatgaagatagctgtcccatctgctctgcagcccag
tttcagtgtgagaaagggcagtgcatcgatgcccgcttgcgatgtaatggagaaattgac
tgccaagataaatccgatgaggcagattgcgatacaatctgtcttccaaatcagtttcga
tgtgccagcggtcagtgcatcctcagaaaacagcagtgtgactcctttccagattgtatt
gatggttctgatgagctcatgtgtgaaaaaaataagccacctgcagatgagcctcagcct
cacagtagtgctattggacctgtgattggtatcatactgtccctttttgtcatgggagga
atgtattttgtttgccagagagtagtatgtcagcgctatgctggacccaatggacctttt
ccacatgaatatgtcagcggtaccccccacgtccctcttaattttatagctccagggagt
tctcagcatggcacttttactggtaaggacggtatctcttgtggcaagtctatgattagc
tccatgagcctcatgggaggaagtagcggtgcccctctttatgaccgaaaccatgttact
ggagcctcttctagtagttcatcgagcacgaaagccactttctacccacagattttgaac
ccacctccttccccagccaccgatcgctccttatataacacagagatgttctattcctca
aacattccttcgacgacaagatcttacaggccctaccttatacgagggatagctccaccc
acaacaccatgcagcacagatgtgtgcgacagtgactacaccacaagccggtggaagacc
aacaagtactacatagacctaaactcagactcagacccttatccccctcccccaacgcct
cgcagtcagtacatgtcggcagaagaaagttgcccaccatctcctgccacggagcgaagc
tactttcacctctacccccctccaccatctccttgtacagactcctcatga
DBGET
integrated database retrieval system
