Alligator mississippiensis (American alligator): 102565801
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Entry
102565801 CDS
T03087
Symbol
TMC5
Name
(RefSeq) transmembrane channel like 5
KO
K21988
transmembrane channel-like protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amj02000
]
102565801 (TMC5)
03037 Cilium and associated proteins [BR:
amj03037
]
102565801 (TMC5)
Transporters [BR:
amj02000
]
Other transporters
Pores ion channels [TC:
1
]
102565801 (TMC5)
Cilium and associated proteins [BR:
amj03037
]
Other cilia and associated proteins
Stereociliary proteins
102565801 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
z-alpha
Motif
Other DBs
NCBI-GeneID:
102565801
NCBI-ProteinID:
XP_014466301
UniProt:
A0A151N184
LinkDB
All DBs
Position
Un
AA seq
894 aa
AA seq
DB search
MSYHYNEAFENPDYHNSETLESGRRKASQMNSMFRQNPYDSSPYDSYTDHDGREQRQSYS
VDIPMATMQPGLEVSQSAKRWGTPNANPYGNTHINHSFEYEPEFTYTPPSTLSTVDGPFA
RRSSDASEASIVQRRNRQRADSVFTTSSDFDRTDANAAAYNENKESQEEKIIRNLASMTT
RERIKAIQKMPKTMKEKREIRNKVLMEKTRKSVSYSTEIHCCTQCMYKIALSYRRFRNGL
SELFQSLQLWQKTLKIIGGKFGTSVLSYFVFLTWLLTFNIFSFLVNFSFVTIPQFIAAGS
NNLSFTGLELLTGAGYFQQTVLYYGFYTNSTITKIENSTSYDMQLAYIFTIGIYFVICFF
SLVYSMAKSFRNNFVNPQTYSGNAGKLLCIWDFNITNEKAVRLKQKNLSTQIKEALSEGK
SEDLNLSLKQRMVHIAIHLAAWIFSLGTTAVCCTCVYYLSINNLKLFMKGDGTELENQAA
TLVLPIVVSLLNLLTPFVFSLLELLEKFQYPRNQIYVTITRNVILKMSIIGILCYYWLNI
VATSATECWETLVGQDIYRLVVVDFLFCLLGSFFGEFIRRIIGTKCLKNLGVPEFDIARN
VLGLIYVQTLTWIGIFFSPLLPAIQIIFFFIIFYVKKVSLMMNCQPPRKVWRASQMTTLF
IFLLFFPSFTGVLSVVAITIWRLNPSEKCGPFRGLSSIFDAVSRWIDVLTNYPRSAWVVW
IYHNLIESVHFFFILTVIIIIITYLYWQIIEGRKIMVRLLHEQIINEGKDKMFLLEKLRA
LQASTRDTPARKGASQQFSTTSSLYQPPGQLDQQRHLSMPNYLERPLEKNKSSFSAKPPY
TADFPETSGFLPGDPQRQQPSTKPGVSEALALAMRARQQAEREMEDEDEEDFRS
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccactataatgaagcctttgaaaacccagactatcacaattcagaaaccttg
gagagtggcagacggaaagcttctcaaatgaattcaatgtttcgccaaaacccttatgat
tcttcgccatatgattcctatacggatcacgatggacgagagcaaagacagagttattcc
gtggatataccaatggccacaatgcagcctggcttggaggtcagccaaagtgcaaaacga
tggggcacgccaaatgcaaatccatatggaaatacacacatcaatcactcctttgaatat
gagccagagtttacgtatacaccaccttctactctcagtactgtggacggcccttttgca
cgcagatcttctgatgcatctgaagctagcatcgtgcagagacggaacaggcaacgagcc
gactccgttttcacgacctcttctgactttgacagaacagacgcaaatgctgcagcatac
aatgaaaataaagaaagccaagaagaaaagatcatcagaaatcttgcaagcatgactacc
cgtgaaagaattaaagcaatccagaagatgccaaagactatgaaagaaaaaagagagatc
aggaataaagttcttatggaaaaaacaaggaagtcagtgagctacagtactgagattcac
tgttgtacacagtgtatgtacaaaattgccctgtcttatcgacgatttagaaatggcctg
tcagaactttttcagtcattacagctatggcagaagacactgaaaattattggtggcaag
tttgggaccagtgtcctttcctattttgtgtttttaacgtggctactgacttttaacatc
ttctcgttccttgtgaacttcagcttcgtaacaatccctcaattcatagcagcaggatca
aataacctttcattcacgggcctggagcttctcactggagctggctattttcaacaaact
gtgctttactatggtttttacacgaactctaccatcacaaaaattgaaaacagcacatct
tatgacatgcagctggcctatattttcactattgggatttattttgtcatctgcttcttt
agcttggtatacagcatggcaaaatccttccgtaataactttgttaatcctcaaacttac
tctggaaatgctggcaaacttctctgcatctgggatttcaatataaccaatgagaaagct
gtgagactgaagcaaaaaaacctcagcacacaaatcaaggaagccctatctgaagggaag
tctgaagatctgaacctttctctaaagcaaaggatggttcatattgctattcatctggct
gcctggattttttccttgggaacaacagctgtttgttgtacttgtgtttactacctctcc
attaacaacctaaagctgttcatgaaaggtgatggaacagaactggaaaaccaggctgcc
acccttgtgttgcccatcgtcgtgtccctcctcaacctcctcacccctttcgtcttttct
ttgcttgaactcctagagaaatttcagtaccccaggaatcagatatatgtcactattacc
agaaacgttattctaaagatgtctataattggaatcctctgctactactggcttaacatt
gtggctacatcagcaacagagtgctgggaaacgttagtcggccaagatatctaccgtctt
gttgtggttgacttcctattttgcttgcttggttctttctttggagagttcatacgaaga
attattggaaccaaatgcctcaaaaaccttggtgtgccagaatttgatattgcacgaaat
gttttaggtttgatctacgtgcaaactttaacctggattggcatcttcttttcacctctg
ctgcctgccatccaaataatatttttctttataatattttatgtgaaaaaggtcagtctg
atgatgaattgtcaaccccctcgcaaagtctggagagcttctcaaatgacaacactcttc
atttttctgttgtttttcccttcctttactggagtgctgtctgtggtagcaatcactatc
tggaggttgaatccttcagaaaagtgtggccctttccggggcttgtcttccatatttgat
gcagtgtctaggtggatagacgtattgaccaactatcctagatcagcctgggtggtgtgg
atttatcataacttaattgaaagcgtgcatttcttctttatcctcactgtcatcatcata
attatcacatatctttactggcagatcatagaaggaaggaaaataatggtcagactccta
cacgagcaaattataaatgaaggaaaagataaaatgtttttacttgagaaactccgagcc
ctgcaggcatcaacacgggacacacctgcaagaaaaggagcaagccagcagttcagtaca
acctcatctttgtaccagccacctggacaactcgatcagcaaaggcatttatcaatgcca
aactacctagaaaggccgctggagaaaaataagagcagttttagtgctaagcctccttat
actgctgacttcccagaaacgagtggcttcctgcctggagatccacagcgacagcagcca
agcacaaaaccaggagtttctgaagccttggcactagctatgagggccagacaacaggca
gaacgggaaatggaagacgaggatgaagaggattttagatcgtga
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