Alligator mississippiensis (American alligator): 102565814
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Entry
102565814 CDS
T03087
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amj03016
]
102565814 (PUS1)
Enzymes [BR:
amj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
102565814 (PUS1)
Transfer RNA biogenesis [BR:
amj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102565814 (PUS1)
Prokaryotic type
102565814 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
WC-rich
Motif
Other DBs
NCBI-GeneID:
102565814
NCBI-ProteinID:
XP_014453900
LinkDB
All DBs
Position
Un
AA seq
402 aa
AA seq
DB search
MAEGLRVAAASQAKRLKSSSTNCEEIEKQEENGHQAKRFKRDQEDVEDQNKKLPKRKIVL
LMAYSGKGYHGMQRNVGCPQFKTIEDDLVSALVQAGCIPENHGEDMKKMSFQRCARTDKG
VSAAGQIVSLKVWLMDNILEKINNHLPSDIRILGLKRVTGGFNSKNKCDARTYSYMLPTF
AFAPKDLDPQDETYRLSQETLEKVNRLLACYKGTHNFHNFTSQKKAKDPSANRYIMEMFC
EEPFVREGLEFAVIKVKGQSFMMHQIRKMIGLVIAVVKGYTAESIMERSWGEEKVDVPKA
PGLGLVLERVHFEKYNKRFGNDGLHEPLEWVEEEEKIAAFKEEHIYPTIINTEQEEKSMV
NWMNTLSIHDFNSTATGAQANDGSSKNNNELDGSDGCDDDSD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggtttgcgagtagcagctgccagccaagccaagagactaaagagcagcagc
accaactgcgaggagattgaaaagcaagaggaaaacggacatcaggccaaaagattcaag
agagaccaggaggatgtggaagaccagaataagaagcttcccaaaaggaagattgttctg
ttgatggcgtattctgggaaaggttaccatgggatgcaacgaaatgtgggatgccctcag
ttcaagacgattgaagacgacttggtgtctgcccttgttcaggctggctgcatcccagaa
aaccatggggaagatatgaaaaagatgtcctttcagagatgtgcacggacagacaagggt
gtgtccgcagctggacagatagtgtcactgaaggtctggctgatggacaacattttagaa
aagatcaataaccatctcccttcagatatcagaattctgggactgaaaagagtaaccggg
ggattcaactctaagaacaaatgtgatgcccggacctactcctacatgctaccaacattt
gcctttgccccaaaggaccttgatccccaagatgaaacctaccgactgagccaagagact
ctggagaaagtcaacagacttcttgcttgctacaaaggaactcataacttccacaacttc
acctctcagaaaaaggccaaggaccccagtgccaatcggtatatcatggagatgttctgt
gaggagccctttgtgagagaaggcctggaatttgcagtgataaaggtgaaaggccagagt
ttcatgatgcaccagatcaggaaaatgattggtctggtgattgcagtagtgaaaggttac
acggctgagtctatcatggagcgcagctggggagaggagaaggtggatgtccccaaagcg
ccggggctggggctggttttggaaagggtgcactttgaaaagtacaacaagcgctttgga
aatgacgggctgcacgagcctctggaatgggtagaggaggaggagaagattgctgctttc
aaagaggaacatatctatccaacaattataaacacggaacaggaggaaaagtccatggtg
aactggatgaataccctctccatccatgacttcaattccactgctacaggggcgcaagcc
aatgacgggagctccaagaacaacaatgaacttgatggcagcgatggttgtgacgatgac
tccgactga
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