Alligator mississippiensis (American alligator): 102565882
Help
Entry
102565882 CDS
T03087
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102565882 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102565882 (SMARCD2)
03036 Chromosome and associated proteins [BR:
amj03036
]
102565882 (SMARCD2)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102565882 (SMARCD2)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102565882 (SMARCD2)
PBAF complex
102565882 (SMARCD2)
GBAF(ncBAF) complex
102565882 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
102565882
NCBI-ProteinID:
XP_019347563
LinkDB
All DBs
Position
Un
AA seq
444 aa
AA seq
DB search
MPPGARMPMTGLQVGPPSGPPYGAASPMRPGLPQSMMDPFRKRLLAPQSQPPLASQRRGV
KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLR
IYISNTFSPAKEEGDGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGP
DNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQT
RANIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFNCIRMRFSEIPMKLAGLLQHPDPI
IINHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESI
NQLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAV
GRHIFAKVQQRRQELEQVLGIRLT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaggcgcccggatgccgatgacagggctgcaggtggggccgccttcaggaccg
ccgtatggagcagccagtcccatgagaccaggcctgccgcagtcgatgatggaccccttc
cggaaacgcctgcttgcgccacagtcacagccaccactggcgagccagaggcgaggggtg
aaaaggaggaagatggctgacaaagtcttaccacagaggatccgggagcttgtcccagaa
tctcaggcctacatggacctccttgcctttgagcgcaagctggaccaaaccattgccaga
aaaaggatggaaatccaggaggccatcaaaaagcccctgacgcaaaagcggaagctgcgt
atttacatctccaacaccttcagcccggccaaggaggagggggatggcggggagcgtgta
gcctcctgggaactgcgtgtggaagggaaactcctggaggatccaagcaagcagaagagg
aagttttcctcctttttcaagagccttgtcattgagctggacaaggaactctatggacca
gacaaccatctggtggagtggcacaggatgcccacaacccaggagactgatggcttccag
gtcaagcgccctggtgatgtcaatgtgaaatgcaccctgctgcttatgctggaccaccag
ccaccgcagtacaaactggaccctcgcctggctcgcctgctgggcgtgcacacccagacc
cgggccaacatcatgcaggcgctgtggctctacatcaaacacaacaagttgcaggacagt
catgagaaggagtacatcaactgcaaccgctacttccgccagatcttcaactgcatccgc
atgcgattctccgagatccctatgaagctggcagggctgctgcaacatcccgatcccatc
atcatcaaccacaccatcagtgtggatccgaatgaccagaagaagactgcctgctatgac
atagatgttgaggtcgatgaccctctgaaagcccagatgagcaacttcctggcctccacc
accaaccagcaggaaattgcctccttggatgccaagatccacgagaccatcgaatccatc
aaccagctgaagacgcagcgagatttcatgctgagcttcagcaacaacccgcaggacttc
attcaggaatggatcaaatcccagaggagggatctcaagatcattacggatgtgattggg
aacccggaggaggagagacgagcagagttctaccaacagccctgggcacaggaagctgtg
ggccggcacatctttgccaaggtgcagcagcgtagacaggaactggaacaagtgctgggg
attcgtctcacctag
DBGET
integrated database retrieval system
