Alligator mississippiensis (American alligator): 102566094
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Entry
102566094 CDS
T03087
Symbol
RAG1, RAG-1
Name
(RefSeq) recombination activating 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
102566094 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102566094 (RAG1)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102566094 (RAG1)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102566094 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_UBOX
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
102566094
NCBI-ProteinID:
XP_006275997
LinkDB
All DBs
Position
Un
AA seq
1044 aa
AA seq
DB search
MEMLPPPSMNLPEEIQHPYTKFSEWKFKLFKVRSFEKTPPGDSHVVNKDKAEEAASLDKG
NVVHMDAVIPVMDKQVVLQAELKVTKQTLEKDANNLKMHDNATHQANLEELCRICGVSFK
TDRYRRSYPVHGPVDNETQGLLRKKEKKATSWPDLIAKIFKIDVRGDIDTIHPTRFCHNC
WSIIQRKFSSSPYEVYFPRNSAMEWQPHSPNCDVCHTSCRGIKRKKQPPNLQLAKRLKII
AERARKNRCVKNQGKLNNKNLMKKITNCKKIHLSTKLLAVDYPVDFVKAISCQICEHILS
DPVETTCRHLFCRTCILKCLKVMGSYCPSCLYPCFPTDLVTPVKSFLNILDSLTLRCPVK
ECDEEILLGKYGQHLPSHKELKGKEIYTHINKGGRPRQHLLSLTRRAQKHRLRELKLQVK
TFAEKEEGGDIKAVCMTLFLLALRAKNEHRQADELEAIMQGRGSGLHPAVCLAIRVNTFL
SCSQYHKMYRTVKAVTGRQIFQPLHALRTAEKALLPGYHSFEWKPPLKNVSANTEVGIID
GLSGLPHTVDDYPIDTIAKRFRYDAALVSALMDMEEDILEGMKAHDLDDYLNGPFTVVVK
ESCDGMGDVSEKHGCGPAVPEKAVRFSFTVMTIAITHGNTNVRIFEEVKPNSELCCKPLC
LMLADESDHETLTAILSPLIAERETMKNSVLLLEMGGILRTFKFIFRGTGYDEKLVREVE
GLEASGSTYICTLCDATRLEASQNLVLHSITRSHTENLERYEVWRSNPYHESVDELRDRV
KGVSAKPFIETVPSIDALHCDIGNAAEFYKIFQFEIGEVYKNPDASKEERKRWQSALDKH
LRKKMNLKPIMRMNGNFARKLMTKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSS
CPAKECPELLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAW
ASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQGFTV
DPEYSLEDSLKLEDSLETNNSMEF
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggagatgttaccaccaccaagcatgaacctgccagaagaaatccagcatccatacact
aagttttcagaatggaaatttaagctgtttaaagtaagatcatttgaaaagacacctcct
ggggatagccacgtggtaaataaagataaagcagaagaggcagcctctttggacaaaggc
aatgtggtacatatggatgcagtaatcccagtgatggataaacaggttgtgctacaagca
gaattaaaggtcactaagcagacacttgaaaaagatgccaacaatctgaagatgcacgat
aatgcaactcatcaagcaaatctggaggaactttgccgcatctgtggagtttcattcaaa
actgaccgctacagaagaagttatccagtgcatggaccagtggacaatgaaactcagggg
cttttgagaaagaaagagaaaaaagcaacatcttggccagatcttattgccaagatcttt
aagattgatgtgcgaggagatattgacacaattcaccctactcgattttgtcacaattgc
tggagtatcattcagagaaagttcagcagttccccatatgaagtgtatttcccgaggaac
agtgccatggaatggcaacctcactccccaaattgtgatgtttgtcacactagctgtcgg
gggatcaagagaaagaagcagccgcccaacttacagcttgcaaaacgactgaagatcatt
gcagaacgtgctcgaaaaaacaggtgtgtaaagaaccaaggaaagctaaacaacaagaac
ctcatgaaaaagattaccaactgcaagaagatacatcttagcacaaagcttcttgcagtt
gactatccagtagattttgttaaggctatctcttgtcagatctgtgagcatattctgtca
gatccagtggaaacaacgtgtaggcacttattctgtagaacctgcatccttaaatgtctc
aaagttatgggcagttattgcccctcctgcctatacccttgcttccctactgacttagtg
accccagtgaaatccttcctaaacattcttgactctctgactttgagatgcccagtgaaa
gaatgcgatgaagagatcttgctggggaaatatggtcagcatctccccagccacaaggag
ctgaaagggaaagagatttatacacacataaataaaggggggcgaccaagacaacacctt
ctgtccttgaccagaagagctcaaaaacatcgtctgagagaactcaagcttcaggtcaaa
acgtttgctgagaaagaagaagggggagatataaaggctgtttgcatgactttgtttttg
ttggctctcagagcaaaaaatgaacaccggcaagcagatgagctggaagctataatgcaa
gggaggggctcagggcttcacccagctgtttgtttggcaattcgagtcaatacatttctc
agctgtagtcagtaccataaaatgtacagaactgtaaaagctgtcaccgggaggcagatc
ttccagccattgcatgctcttcgcactgctgagaaagccctgctcccaggttatcattca
tttgagtggaagcctcctttgaaaaatgtgtctgctaatacagaagtgggaattatagat
gggctttcaggcctgccacacacagttgatgactacccaattgacacaattgcaaagagg
tttcgatatgatgcagccttggtttctgccttaatggatatggaagaagacatcttggaa
ggcatgaaagcacatgacctggatgactatttgaatggtcctttcactgtggtggtgaaa
gagtcttgtgatgggatgggagatgtcagtgagaagcatggatgtggaccagcagtccca
gaaaaggcagttcgcttttctttcactgtcatgaccatcgctataactcatggcaataca
aatgtaaggatctttgaagaagtcaagcccaattcagagctatgttgcaagccattgtgt
cttatgttggctgatgagtcagaccatgagactctgacagccatcctgagccctctcata
gcagaaagagagaccatgaaaaacagtgtactacttcttgaaatgggaggcatcctcaga
acattcaaattcatctttaggggtacagggtatgatgagaaacttgtacgtgaggtggaa
ggccttgaagcctctggctccacttacatttgtaccctctgtgatgcaacccgcctggaa
gcctctcagaatttggtcctccactccataacaaggagtcacactgaaaatctagagcga
tatgaggtgtggaggtccaacccataccatgaatcagttgatgagctccgtgatagagtg
aagggtgtttctgcaaaaccatttattgagactgttccctctatagatgcgttgcactgt
gacattggcaatgcagctgagttttacaagatattccaatttgagataggtgaggtctac
aagaaccctgatgcatctaaagaagagaggaagaggtggcaatcagctcttgacaagcac
ctgaggaagaagatgaacctgaaaccaataatgaggatgaatggaaactttgctagaaag
ctgatgactaaagagacagtggaagcagtttgtgaattaataaagtgcgaggaaaggcat
gaagccctcaaagaactgatggatctctacctgaagatgaaaccagtgtggagatcttca
tgtcctgccaaggagtgcccagaactgttgtgccagtacagtttcaactcacaacgtttt
gctgagctcctatccacaaagttcaagtatagatatgagggcaaaattacaaattacttt
cataaaactcttgctcatgttcctgaaatcatagaaagagatgggtccattggtgcctgg
gcaagtgaaggaaatgaatctgggaacaaattgtttagacgtttccgaaaaatgaatgcc
aggcagtcaaaatgctatgaaatggaggatgtcctgaagcaccattggctgtatacatct
aagtatctgcagaagttcatgaatgctcataaaacattgaaaagccagggcttcacagtt
gatccagaatacagtttagaagactccctgaaattggaagactctttggaaaccaataat
tctatggaattctaa
DBGET
integrated database retrieval system
