KEGG   Alligator mississippiensis (American alligator): 102566117
Entry
102566117         CDS       T03087                                 
Symbol
PSMC5
Name
(RefSeq) proteasome 26S subunit, ATPase 5
  KO
K03066  26S proteasome regulatory subunit T6
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03050  Proteasome
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    102566117 (PSMC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:amj03051]
    102566117 (PSMC5)
Proteasome [BR:amj03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     102566117 (PSMC5)
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_2 AAA_5 AAA_16 AAA_22 AAA_lid_PRS2_C nSTAND3 PRS7_OB RuvB_N TIP49 AAA_18 AAA_28 Mg_chelatase AAA_3 AAA_33 NPHP3_N AAA_14 Parvo_NS1 ATPase FapA AAA_17 PhoH IstB_IS21 AAA_24 AAA_7 AAA_25 DUF815 Sigma54_activat DUF7006 bpMoxR ABC_tran DUF5906 RNA_helicase AAA_11 Zeta_toxin AAA_19 TsaE HR1
Other DBs
NCBI-GeneID: 102566117
NCBI-ProteinID: NP_001279996
UniProt: A0A151N9U1
LinkDB
Position
Un
AA seq 411 aa
MPAEKMAVDGPEQMEMDEGKGGTGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAK
VRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVA
LRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELF
EALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF
VMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT
NRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGAS
GAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgccggccgagaagatggcggtggacgggcctgagcagatggagatggatgaaggcaaa
ggagggacaggcctccgccagtactacctgtcgaagatcgaggagctgcagctgattgtg
aatgagaagagccagaatctccgccgtctgcaagcgcaaaggaatgagctgaatgccaaa
gtgcgcctgctgcgggaggagctgcagctgctgcaggaacagggctcctacgtcggcgag
gtggtgagagccatggacaagaagaaagtgcttgtgaaggtccatccggaagggaaattt
gtggtagacgttgataaaaacatagacatcaatgatgtgacccccaactgccgtgtggcg
ctgcggaatgacagctacacactccacaagattctgcccaacaaggtggacccccttgtg
tccctcatgatggtcgagaaggtccctgattccacctacgagatgatcggaggcttggac
aagcagatcaaggaaatcaaggaagtgattgagctgcctgtcaagcatccagagcttttt
gaagccctgggaattgcccagcccaagggcgtgttgctgtatggccctcctggcactggg
aagaccttgcttgcccgggctgtggctcaccacactgactgcaccttcatccgtgtctca
gggtctgagctggtacagaagttcattggcgagggtgcacgcatggtgcgggagctcttt
gtgatggccagagagcacgctccttccatcatcttcatggatgagatcgactccatcggc
tcttctcgcctggaaggtggctctgggggtgacagcgaggtacagcgcaccatgctggag
ctcctcaaccagcttgatggcttcgaagccaccaagaacatcaaagtcattatggccact
aaccggatagacatcctagactctgcactgctgcgccccggccgcattgacaggaagatt
gagttccctcctccaaatgaagaggctcgcctagacattctgaagatccactctcggaaa
atgaacctaacacggggtataaatctccgtaaaattgcagagctgatgccaggagcctct
ggtgctgaggtgaagggtgtgtgcacagaagctggcatgtatgcactgagggagaggagg
gtgcatgttacacaggaagactttgaaatggctgtagccaaggtgatgcagaaggacagt
gaaaagaacatgtctatcaaaaagctgtggaagtga

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