Alligator mississippiensis (American alligator): 102566147
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Entry
102566147 CDS
T03087
Symbol
SRRM1
Name
(RefSeq) serine and arginine repetitive matrix 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102566147 (SRRM1)
03015 mRNA surveillance pathway
102566147 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102566147 (SRRM1)
03041 Spliceosome [BR:
amj03041
]
102566147 (SRRM1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102566147 (SRRM1)
Spliceosome [BR:
amj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
102566147 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
102566147
NCBI-ProteinID:
XP_014461200
LinkDB
All DBs
Position
Un
AA seq
881 aa
AA seq
DB search
MSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR
EFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKDKDKDK
RDKEDKDSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSITPAP
EKKEETPEPEPSVKAKETLIQEATSTSDILKAPKPEPVPDTKETSPEKSLKKEKEKEKEK
EKPRQRSPSRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRR
MPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRIVSSPPRKTRRLSP
SASPPRRRHRPSPPASPPPKPRRSPTPQQTNRARKGRGSVSPGRTSAPKHKNPEKRESPS
PAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSGTPLLYSGSSSSSEEERP
KRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMGKRWQSPVIKSRRRRSPSPPP
ARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTT
SPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSLSSKHRKGSPPSRSNRETRS
PLQNKRHSPSPRPRASHTSASPPPLRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKTKA
STPSPQSARRVSSSRSASGSPEPAPKKHQAPPSPARSRSPSTNWSPQPVKKAKSPTQSPS
PARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAAVVAATTTSPQEDKE
AETEPKKETESEAEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtaaacctggaagttatcaaaccatggataacaaaacgagtaacagaaatc
cttgggtttgaagatgatgtagttattgaatttatattcaaccagttggaagtgaagaat
ccagattccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctaga
gagttcatgggcgaactgtggccactgctgctaagtgcacaagaaaacattgctggtatt
ccctctgctttcctggagctgaagaaagaagaaataaaacaaagacagattgagcaagag
aagttggcttctatgaagaagcaagatgaggacaaggacaaggataaggacaaagacaag
agggacaaggaagacaaagacagcagagaaaaaagggagagatccagaagcccaagaaga
cgcaaatcaagatctccttctcctagaaggagatcgtcccctgtcaggagagagagaaaa
cgcagccattctcgatcccctcatcacagaactaagagccgtagcatcacccccgcacca
gaaaagaaagaggagactccagagccagagccttctgtaaaagcaaaggaaactttgatt
caagaggcaacctcaactagtgatatcctaaaagctcctaaacctgagcctgtaccagat
actaaagaaacttctccagaaaaaagtttaaaaaaagagaaggagaaagaaaaagaaaaa
gagaagcctcgtcagagatcaccatctcggtccaagtcgaggtcaaggtcaaggtctcgg
tccccttctcattctagaccaagacggcgtcatagatcaaggtcaaggtcttactcccct
agaaggcggccaagcccaagacgacggccctctcccaggagaagaagcccaccaaggcga
atgcctccaccacccagacacagaagaagcagatccccagtgagaaggagaagaaggtca
tcagcatctttatctggaagtagttcgtcttcctcctcttcgcgttcgcgatcgccacca
aagaaaccaccaaaaagaattgtatccagtcctcctcgtaagacgcgtagactctcccct
tctgcaagtcctccaaggcggaggcacagaccatccccaccagcgagtccaccaccaaaa
ccacgtaggtctccaaccccacaacagacgaatcgtgcaagaaaaggccgtggctctgtt
tctccaggcagaacatcagcacctaaacataagaatcctgaaaaaagagagtctccatca
ccagcaccaaagcctaggaaagtagaattgtctgaatcagaagaagataaaggtggtaaa
atggctgctgcagattctgtgcagcagagacgtcagtacagaaggcagaaccagcagtct
tcatctggtacaccactactttactctggttcatcatcttcctctgaagaggaacgacct
aaaagatcaaatgtaaagaatggtgaagtgggtaggcgcaggcgacactcgcattcacgg
agtccgtcaccttctccacgaaaacggcaaaaagagtcctcccctcggatgcagatggga
aagaggtggcaatcaccagtgattaaaagtaggaggaggagaagtccgtccccgcctcca
gccagaagacgacgctcaccttccccagcacctccaccaagacggcgcagatcaccatcg
ttacctaggcgaaggtctccatcgccacctccacgcagacgctcaccttctcccagaaga
tactctcctccaatacaacgacgatactctccttctcctcccccgaagagaagaaccact
tctccccctcccccaccaaagcgaagagcatcaccttcgccacagtcaaaacgcagagtc
tcgcattctcctccaccaaaacaaagaagttctccagctgcaaagagacgttctccatct
ctatcttccaagcataggaagggatctccccccagcaggtctaatcgtgaaacccgatcc
cccttacaaaacaaacggcattcaccttcaccacggcctagagcttctcatacctctgca
agtccaccaccgctgcgaaggggagcttcatcttcaccccagagaaggcagtctccatct
ccaagcactcgacccatcagaagagtgtcaagaaccccagaacccaagaagacaaaggct
tccacaccaagtccgcagtcagcgagaagagtgtcttcatccaggtctgcatcaggatca
cctgagccagcacctaagaaacatcaagctcctccatccccagctcggtctcggtcccct
tccactaactggtctccacaacctgtgaaaaaggctaaaagccccacgcagagtccatca
cctgcaaggaattctgatcaggaaggtggggggaagaagaagaagaaaaagaaggataag
aaacacaaaaaggataaaaagcacaagaaacacaaaaaacacaagaaagagaaggctgct
gcagcagcggctgctgctgtagtggcagctactaccacgtcaccacaggaggacaaagaa
gcagagacagaacctaagaaggagactgaaagtgaagctgaagataatctggatgatcta
gaaaagcatctgcgagagaaggcactgagatcaatgaggaaggcacaagtgtcaccacca
tcttag
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