Alligator mississippiensis (American alligator): 102566395
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Entry
102566395 CDS
T03087
Symbol
SLC6A4
Name
(RefSeq) solute carrier family 6 member 4
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102566395 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amj02000
]
102566395 (SLC6A4)
Transporters [BR:
amj02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102566395 (SLC6A4)
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Ortholog
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
MUCL1
DUF3439
Motif
Other DBs
NCBI-GeneID:
102566395
NCBI-ProteinID:
XP_006271355
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All DBs
Position
Un
AA seq
670 aa
AA seq
DB search
MEKTTSNNETQPLATRQELSDCKEGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKEE
AGQISNGYSVVQSPVPCNGVGDGEDVQCTAPAATTTTTTTTSTTCGAEAQQQLMELDERE
TWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISVWRKICPIFKGIGFAICIIAFYVASYYNTIMAWALYYLISSFTAELPWTTC
QNAWNTGNCTSYFGTENVTWTPHSISPAEEFYTRQVLQVHRSKGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYVILFILLIRGATLPGAWRGVIFYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALVTSTVNCMTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTF
AGLEGVITAVLDEFPHVWGKRREWFVLGLIITCFLGSLSTLTYGGAYVVKLFEEYATGPA
VLTVVFLESIAVAWFYGVTRFCSDVKEMLGFTPGWYWRICWVAISPIFLLFIICSFISSP
PDLRLFQYSYPYWTTVVGYCIGTSSFICIPVYMVYRLSTTAGTFKERVLKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacgacgtccaacaatgagacccagccccttgccactaggcaagagctctcg
gactgtaaggaaggagaagactgcaaagagaacggacttctagtcaggaaccctaaatct
gccctgcggctggtggaggatggcaataaagtccaccccagccagggggataaagaggag
gcaggccagatctcaaacgggtactcagtagttcagagcccagtgccctgcaacggagtg
ggagatggggaagacgtccagtgcactgctcccgcagccacgactacaacgaccaccaca
acttccaccacgtgtggggcagaagctcaacagcagctgatggagctggatgagagagag
acctggagtaaaaaaatggactttctgctttctgtcattggctatgcggtggacctggga
aacgtctggcgattcccctatatatgctaccaaaacggaggaggtgcgttcctcatcccg
tacacaatcatggctatctttggaggcattcccctcttctacatggagctagccctggga
cagtaccacagaaatgggtgcatctcagtctggaggaaaatctgtccaattttcaaagga
attggctttgccatctgcatcatagccttttacgtagcctcttactacaacaccattatg
gcttgggccttatactacctcatttcctccttcacggcggagctgccctggaccacctgc
cagaacgcctggaacacgggcaactgcaccagctacttcggtaccgaaaacgtcacctgg
accccgcactccatctctcctgcagaagaattttatacccgccaagtgctacaggtacat
aggtccaaagggctggatgacctggggggcattagctggcaactgaccctctgtttattg
ttgatcttcaccattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtgacggccacgttcccttacgtcatactctttatcctattgatacgaggtgcc
actttgccaggagcctggaggggcgtcatcttctacctgaaacctgactggcagaaactc
ctagctacagaggtgtgggtggatgccgcagctcagattttcttctctctcggtccaggc
tttggggtcctcctagcttttgccagctacaacaagttccacaacaactgctaccaggac
gcgctggttacaagcacggtgaactgcatgactagttttgtctccgggtttgtcatcttc
accgtgcttggctacatggccgagatgaggaacgaagacgtgtccgaggttgctaaagat
acaggtcccagccttctcttcattacctatgcagaggccatcgcaaacatgcctgcctcg
actttttttgccatcatatttttcctgatgttaatcactctgggactagacagcacgttt
gcagggctggaaggggtgatcactgcagtgctggatgaattcccacacgtctggggcaag
cgcagggaatggtttgtgcttggtctgatcatcacttgcttcttggggtcactatcgacc
ctaacgtatggaggtgcatatgtggtgaagctgtttgaagaatatgccacagggccagct
gtcctaacagtggtcttcttggaatcgattgctgtggcctggttctatggcgtcacccgg
ttttgcagtgatgtgaaggaaatgctgggcttcaccccaggctggtattggcgcatttgt
tgggtagcaatcagccccatcttccttttgttcatcatttgcagttttatatccagtcct
cccgacctccggcttttccagtacagctatccctactggacaaccgtagtgggttactgc
ataggaacctcctctttcatctgcattccagtctacatggtttaccggctatcaaccacc
gcgggaacgtttaaagagcgtgttttaaaaagcattactccggagacagccacagagatc
ccttttggggacatccgcatgaacgctgtttaa
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