Alligator mississippiensis (American alligator): 102566457
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Entry
102566457 CDS
T03087
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102566457 (ZEB1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
102566457 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
102566457
NCBI-ProteinID:
XP_014464548
UniProt:
A0A151PD49
LinkDB
All DBs
Position
Un
AA seq
1105 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHTVLQENSEREGSTNSGWEDEAGKETKEILGPEAQTDEVGCTVKEDECDSDAENE
QNHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKTSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPVNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETINTASIPQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVSTNSCKNEKLPEDLTVKSEKEKNFEGETNDSTCLLCDDCPG
DLNALQELKHYDPKNPTQLSQLSGTEAEKSESPAPSEAGEGNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQGKLSNPNDND
DQAGHTDVSEPSNSTSNSQNSLKIIKSQTLSVGSTLNGSRSSTPSPSPLNLSSSRSSQGY
TYTAEGGQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DSSITDSDPVVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVTPAVQETPPKQTQANGNQDEKQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEETGQEVLNSEHVSARASPSQ
IDSDERESLTREEEEDSEKEEEEEEYKEMEELQEEKECRNLQIEKEDDEEGKTEGNKKDE
EAANEVSNVEEVIQNCEQVSEENKA
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcaggcgaacccgaggcgcaataacgtt
accaattacaataatgtggtagaagcaaattcagattcagatgacgaagacaaattgcat
attgtggaagaagaaagtgtaacagatgcagcagattgcgatgctagtgtgccagaagat
gacttgccaacagaccatacagtattacaagaaaacagtgaaagagaagggagtacaaac
agtggttgggaagatgaagctggaaaagaaacaaaggaaatcctggggcctgaagctcaa
acagatgaagttggatgtacagtaaaagaagatgaatgtgattctgatgcagaaaatgag
caaaaccatgacccaaatgttgaagaattccttcaacaggaagatacagctgttatttac
cctgaagcacctgaagaggaccagagacaaggcacaccagaagctagcggtcaggatgaa
aatggaacgccagatgcattttcacaactgcttacctgcccatattgtgatagaggatac
aaacgctttacctctctgaaggaacacattaaatatcgccatgaaaaaaatgaagataat
ttcagttgctccttatgcagttacacatttgcatacagaacacagcttgaacgccacatg
acatcacataaatcaggaagagatcaaagacatgtgacgcaatccagtggcaaccgcaaa
ttcaagtgcactgaatgtggaaaagctttcaaatacaaacaccatctaaaggaacaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatatagttcacacataagcagtaagaaatgtattggtttgatgcctgtgaat
ggtcgagcacggtcagggctcaagacatctcagtgctcctccccttccctttctgcatca
ccgggcagcccagcaagaccacagatacgtcaaaagatagaaaacaagcccttacaagag
caacttcctgttaaccaaattaaaacggaacctgtggattatgaattcaagcccattgtg
gttgcttcaggaatcaattgttcaacccctttgcaaaatggggtttttagtggtggtagc
ccattgcaggcaaccagttctcctcagggtgtagtgcaagctgttgttttaccaaccgtg
ggtctggtgtctcccataagcatcaacttaagtgacattcaaaatgtgcttaaagtggca
gtggatggtaatgtaataaggcaagtattggaaaataatcatgctaatcttgcatccaaa
gaacaagaaacaatcaacactgcatccataccacaagctggtcattcactcatttcagct
atcagtcttcctttggttgatcaagatggaacaaccaaaattatcatcaattacagttta
gaacagcctagtcaacttcaggttgttccacagaacctaaaaaaagaaaactctgtctcc
acaaacagctgcaaaaatgaaaaattaccagaagatctcacagtgaagtctgagaaagaa
aaaaactttgaaggggaaaccaatgatagcacttgccttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgatccaaaaaatcccacccagctttct
cagctcagtgggacagaagctgagaaatctgaatcccctgctccatcagaagcaggggaa
ggcaatttatctcctggtcagccacctttaaagaaccttttatctctcctaaaagcatat
tatgcattaaatgcacaacccagtgcagaagagctttcaaaaattgctgattcagtaaac
ctaccactggatgtggtaaaaaaatggtttgaaaaaatgcaagctggacaaatttctgta
cagtcttctggaccatcttctcctgaacaaggcaaattaagtaatcctaatgataatgat
gatcaagcaggacatacagatgtgagtgaaccctccaacagcacaagtaactcacaaaat
tcgctcaagataattaaatctcagactttatcagtgggatcgactctgaatggttcgcga
agtagcacgccatctccatcaccactaaacctctcatcatccagaagttcacagggttat
acgtacacagcagaaggtggacaagaagagccacaaattgaacctcttgacctttcacta
ccaaagcaacatggagaactattggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttgacttgtgcaaaaaaagaaccacaaaag
gacagcagtattacagactctgatcctgttgtaaatgtaatcccaccaagtgccaacccc
ataaatattgctatacctacagtcactgcccaattacctacaattgttgccattgctgac
cagaacagtgttccatgcttaagagctctagctgccaataagcaaaccattttgattcca
caggtggcttatacatattcaactacagttacccctgcagtccaagaaacaccaccaaaa
cagactcaagccaatggaaatcaggatgaaaagcaagacactagctcagaaggagtatca
aatgtggaagatcaaaatgattcagattcaaccccacccaagaagaaaatgagaaagaca
gaaaatgggatgtatgcttgtgatttatgtgacaaaatattccagaagagcagttcatta
ctgagacataagtatgaacacacaggtaaaagacctcatgagtgtggaatttgtaaaaaa
gcatttaaacacaaacaccatttgattgaacacatgcgactgcattctggagaaaagccc
tatcaatgtgacaaatgtggaaagcgtttttcgcactcggggtcttattctcaacacatg
aatcatcgttattcatattgcaaaagagaagcagaagagcgagatagcacggaacaagaa
gagacaggacaagaggtcctaaatagtgagcatgttagtgccagggcatcaccatcacag
atcgactcagatgaaagagagagtttaacacgggaagaggaggaagacagtgaaaaagag
gaagaggaggaagagtacaaagagatggaagaacttcaggaagaaaaagaatgtaggaat
ctacaaatagagaaggaagatgatgaggaagggaaaactgagggtaataagaaggatgaa
gaagctgcaaatgaagttagcaatgtagaagaagttatacagaattgtgagcaggtgtca
gaagaaaacaaagcttaa
DBGET
integrated database retrieval system
