Alligator mississippiensis (American alligator): 102566465
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Entry
102566465 CDS
T03087
Symbol
SPTAN1
Name
(RefSeq) spectrin alpha, non-erythrocytic 1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04210
Apoptosis
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102566465 (SPTAN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102566465 (SPTAN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
102566465 (SPTAN1)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102566465 (SPTAN1)
Intermediate filaments
Intermediate filament-binding proteins
102566465 (SPTAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
102566465
NCBI-ProteinID:
XP_006269487
LinkDB
All DBs
Position
Un
AA seq
2477 aa
AA seq
DB search
MDPSGVKVLETAEDIQERRQQVLDRYHRFKELSSLRRQKLEDSYRFQFFQRDADELEKWI
QEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIIKLDETGNQMINEGHFASETI
RTRLQELHRLWELLLEKMREKGVKLLQAQKLVQYLRECEDVLDWIIDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAGKLIQEQHPEEEMIKAKQDEVNASWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETIGWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVKALCAEADRLQQSHPINASQIQVKREELITNWEQIRTLAAERHARLNDS
YRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSA
DESGQSLLAAGHYASDEVKEKLTILSDERAALLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
MDDVATRRDALLSRRNALHNRAMCRRAQLEDSFHLQQFFRDSDELKSWVNEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVKHYASDEVAARMNEVISLW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKH
ALLEADVTAHQDRIDGITIQARQFQEAGHFDADNIKKKQEALVARYEALKDPMVARKQKL
ADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVTQKGNAMVEEGHFAAEDVKIKLNELNQKWESLKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLTAYGSSIQALREQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSASRENLLEEQGSIALRQEQIDNQTLITKEVGSVSLRMKQVEELYHSLLELG
EKRKDMLEKSCKKFMLFREANELQQWINEKEAALTNEEVGADLEQVEVLQKKFDDFQKDL
KANESRLKDINKVANDLESEGLIAEEVQAVQQQEVYGMMPRDETDSKTASPWKSARLMVH
TVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDN
YGHDLASVQALQRKHEGFERDLAALGDKVNSLGDTAQRLIQSHPESAEDLQEKCTELNQA
WSSLGKRADQRKEKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLER
HQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIKEKLDILDQERADLEKAWVQRRMM
LDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDTLDSVEALIKKHEDFDKAINVQEEK
IAALQAFADQLISADHYAKGVISNRRDEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDV
DEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDMGNS
LIDRGACAGSEDAVKVRLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLS
EVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMTSSAFDTSQV
KDKRDTINERFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRD
LTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVEHWKEL
KQLASARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAF
ETDFTVHKDRVNDVCANGEDLIKKNNHHEENITAKMKGLRDKVSDLEKAAAQRKAKLDEN
SAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIAN
ITALKDQLLAAKHIQSKAIEVRHASLMKRWNQLLANSAARKKKLLEAQEHFRKVEDLFLT
FAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDR
QIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHAN
AFHQWIQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEA
LILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHF
DKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILDTVDPNRDGHVSLQEYMAFM
ISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCISHMKPYMDSKGRE
LPSAYDYIEFTRSLFVN
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagtggggtaaaagttctggaaacggcagaggacatccaagaaaggcgccag
caagtcttggaccggtaccacaggttcaaggaattgtcttctctgaggcgccaaaaactt
gaagattcctatcgattccagtttttccaacgtgatgcagatgagctggaaaaatggatc
caggagaaactccaaattgcatctgatgagaattacaaagacccaaccaatctacaggga
aaactgcagaagcaccaggcctttgaagctgaggttcaggccaattcaggggcaatcatt
aaactggacgaaactggaaatcagatgattaatgaagggcattttgcatctgaaactata
agaactcgactacaggaacttcatcgactctgggagcttctgcttgagaaaatgcgggag
aagggagtcaaactactacaagcacagaagctggtgcagtacttaagagaatgtgaagat
gttttggactggatcattgacaaggaggcaatagtgacatcggaggagctgggccaggac
ctggagcatgttgaggttttacaaaagaaatttgaagagtttcagacagacctggcagcc
catgaagaaagagttaatgaagtgaaccaatttgctggtaaactaatccaggaacaacac
cccgaggaggaaatgatcaaagctaaacaggatgaagtaaatgcaagttggcaacgcctt
aagggactagcccttcaaaggcaggggaaactctttggagcagctgaagttcagcgcttt
aatcgggatgtggatgaaaccataggctggattaaagagaaagaacaactcatggcctcc
gatgattttggtagagacttagccagcgtgcaggctctgctacgcaagcatgagggcctg
gagcgagaccttgcagccctggaagacaaggtaaaggctctgtgtgcagaagctgaccgg
ctgcagcagtcgcacccaataaacgcttctcagatacaagtgaaacgggaggagctgatc
acaaattgggaacagatccgcactctggcagcagagaggcatgctcgcctgaatgactcc
tacagacttcagcgcttccttgctgacttccgtgacctcactagctgggtgactgaaatg
aaggctctaattaatgctgatgaacttgcaaatgatgtggctggagctgaagccctgctt
gacaggcaccaggagcataagggagaaatcgatgcccatgaagacagttttaagtctgct
gatgagtctggtcaatccttgctggctgctgggcactatgcctctgatgaagttaaagaa
aagctgaccatcctttcagatgaaagagcggccctcctagagctgtgggaacttcgcaga
cagcagtatgaacaatgtatggacctacagctcttctacagagacacagaacaagtggat
aactggatgagcaagcaagaagcattcctcctaaatgaagacctaggcgattctctggac
agtgttgaggctctgctaaagaagcatgaggactttgagaaatccctcagtgcacaggag
gagaaaatcacagcattggatgaatttgctactaaactgattcagaataaccattatgcc
atggatgacgttgctacacgcagagatgctctgctgagtcggcggaatgcactgcataac
agagctatgtgccgccgtgcccaactagaagactcattccatttgcagcagtttttccga
gactctgatgaactaaagagttgggtcaatgaaaaaatgaaaactgcaacagatgaggct
tacaaggacccatcaaacctgcaaggaaaagttcagaaacatcaagcttttgaggcagag
ctttctgcaaatcaaagtcgcattgatgctttggagaaagctggccagaagttgattgat
gtgaaacactatgcatcagatgaagtggcagctcgcatgaatgaagtcatcagcttgtgg
aaaaagctcctggaggctaccgagctcaaaggaataaagctgagagaagccaaccagcag
cagcaatttaaccgcaatgtggaagacattgagctatggttgtatgaggtggagggacat
ttggcttctgatgattatggaaaagatcttaccaatgttcagaaccttcagaagaaacat
gctttgctggaggcagatgttactgctcaccaggatcgtattgatggtattaccatccaa
gctcgccagttccaggaggctggacactttgacgctgacaatatcaagaagaaacaagaa
gctttagtggctcgctatgaagcactgaaggatcccatggtagctcgcaagcagaagctt
gctgattctctccgcctgcagcaacttttccgtgatgttgaagatgaagaaacctggatt
agagagaaggaacctattgcagcttccacaaaccgaggcaaagatttaattggtgtccag
aacctgctaaaaaaacatcaagccttgcaggcagaaattgcaggccatgaacctcgtatt
aaagcagttacccagaaaggaaatgcaatggtggaagaaggacactttgctgctgaggat
gtaaaaatcaaattgaatgaactgaaccagaaatgggaatcacttaaagcaaaggcatct
cagaggcgacaagatttggaggactccttgcaagcacagcagtactttgctgatgctaat
gaagctgagtcatggatgagggagaaggagcccattgtaggcagcacagactatggaaaa
gacgaggactccgctgaggctcttctgaaaaaacatgaggcattgatgtcagatctcacc
gcatatggcagtagcatacaggctctgagggagcaggctcagtcttgcaggcaacaagtt
gcccctactgatgatgaaactggcaaagagctggtcctggcactctatgattaccaggaa
aagagtccccgtgaggtcacaatgaaaaagggagacatcctgacactgctcaatagtact
aacaaggactggtggaaggtggaagttaatgaccgtcagggttttgtacccgctgcttat
gtgaaaaagctagaccctgcccagtctgcctcccgagagaatctactggaagagcagggc
agcatagcattgcggcaggagcaaattgacaaccagactctcataactaaggaagtcggc
agtgtatctctacgtatgaaacaggtcgaagaactataccactctctgcttgagctgggg
gagaagcgcaaagacatgctggaaaaaagctgcaaaaagttcatgcttttccgtgaggct
aatgagctgcagcagtggatcaatgagaaggaagctgcactcaccaatgaggaggtggga
gctgatttagagcaggtggaggtactgcagaagaaatttgatgacttccagaaggatctg
aaagccaatgaatcgcgcctaaaggatatcaacaaagttgcgaatgacctggaatcagaa
gggctgatagcagaagaagtacaggcagtacagcagcaggaagtctatggcatgatgccc
agggatgaaactgattctaagactgcttcaccttggaagtctgcccgtctgatggtacac
acagtggctacctttaattccatcaaggagctgaatgagcgctggagatctctgcagcaa
ctagcagaagagcgaagccagctgctgggcagtgctcatgaagttcagcgattccacaga
gatgccgatgaaactaaggaatggattgaagagaagaatcaggcattaaatacagacaac
tatggacatgatctggccagtgtgcaggccctacagcgcaaacatgaaggttttgagaga
gacctggcagctcttggagacaaggtgaactctcttggagacactgcacagcgcctaatc
cagtcacacccggagtctgctgaagaccttcaagaaaagtgtactgagttgaaccaggcc
tggagcagcctgggaaaacgtgctgatcagcgcaaagagaagcttggggactctcatgac
ctccagcgtttcctcagtgacttcagggacctcatgtcttggattaatggaatccggggc
ttggtgtcctcagatgaactggcaaaggatgtgacaggagctgaggctctgctggaaagg
caccaggaacatcgcactgaaatagatgccagggctggcacttttcaggcatttgaacaa
tttggtcaacaactcttggctcgcgggcactatgccagtccagagattaaggagaaactg
gatattctggatcaggaacgggcagacctggagaaagcctgggtccagcgcagaatgatg
ttggaccagtgtctagaattacagctgtttcatcgggactgtgaacaggctgaaaactgg
atggctgcccgtgaggctttcctgaacacagaagataaaggtgacactttagacagtgtt
gaggctctcatcaagaaacatgaggacttcgataaagcaatcaatgtccaggaagaaaaa
attgctgctcttcaggcttttgctgaccaactgatttctgcagaccactacgcgaaaggt
gtcatttctaacagacgtgatgaggttctggacaggtggcgtcgcctgaaggcccagatg
attgagaagaggtctaagctgggagaatctcagaccctccagcagttcagccgtgatgtt
gatgaaatagaggcctggatcagtgaaaagctccaaactgcaagtgatgaatcatacaag
gatcccacaaatatccagctttccaaactgttgagcaaacaccagaaacatcaggccttc
gaagctgaacttcatgctaatgcagaccggatccgtggagtcattgacatggggaattct
ttgatcgatcggggagcgtgtgctggcagtgaagatgcagtaaaggtgcgcctagctgct
ctggctgaccagtggcaattcctggtgcagaaatcagcagagaagagccaaaagctgaaa
gaagccaacaaacagcagaatttcaatactggaatcaaagattttgatttctggctttca
gaggtggaagccctgcttgcatctgaagactatgggaaggacctggcatccgtgaacaac
cttctgaagaaacaccaactcctggaagctgatatatctgcccatgaagatcgcttgaag
gacctgaatggccaagctgacagcttaatgaccagcagcgctttcgacacttcccaggtg
aaggacaagcgtgacaccattaatgaacgcttccagcggatcaaaagtatggcagcagcc
cggcgtgcaaaactaaatgagtcccaccgtttgcatcagttcttccgggatatggatgat
gaggagtcctggatcaaggaaaagaaactgctggttagctcagaggactatggcagagac
cttactggagtgcagaacctaaggaagaaacacaaacgtctggaagcagaactggctgcc
catgagcctgccatccagggtgtactggacactgggaagaaactgtcagatgataacaca
attggaaaggaggagatacagcagagactggctcaatttgtggagcactggaaggagtta
aagcagctggcatctgcacgtggccaacgtctagaagagtctctggagtaccagcaattt
gtggccaacgttgaggaagaagaagcctggattaatgagaaaatgacactggtagccagc
gaagactatggagacacacttgctgctatccaggggttgctaaaaaagcatgaagcattt
gaaactgacttcactgtgcacaaggacagagtaaatgatgtttgtgctaatggagaagac
ctcattaagaagaacaatcaccatgaagagaacatcacagccaagatgaaaggcctgagg
gacaaagtgtcagatctagagaaggcagcagctcaaaggaaggccaagctggatgagaat
tctgccttccttcagttcaactggaaggctgatgtcgtggagtcctggataggtgagaag
gaaaacagtctgaaaacagatgactatgggcgagatctctcctctgtgcaaacactcctc
accaagcaggaaacttttgatgctggtcttcaggctttccagcaggaaggaattgcaaat
atcactgcactgaaagaccagctactggcagccaaacacatccagtcaaaggccattgag
gtccgacatgcttctctgatgaaacgctggaaccagctgctggccaactctgctgcccgg
aagaagaaactcctggaggctcaggagcacttcagaaaggttgaggatctattcctgact
tttgcaaagaaggcatctgccttcaacagctggtttgagaatgcagaggaagacctgact
gaccctgtgcgctgtaactcactggaagaaatcaaggccctgcgagaggctcatgatgct
ttccgctcttcgcttagctctgcccaggctgacttcaaccagttggctgagctggaccgc
cagatcaaaagcttccgtgtagcttccaacccatacacttggttcactatggaggctctt
gaggaaacctggaggaatttgcagaaaatcatcaaggagcgtgagttagaactgcagaag
gaacagaggaggcaggaggagaatgataaattgcgccaagagtttgctcaacatgctaat
gctttccaccagtggattcaggagaccaggacttatctgctagatgggtcttgtatggtg
gaggagtctgggaccctggaatcacagctggaagctactaagcggaagcaccaagagatc
cgggcaatgaggagtcagctgaagaaaattgaggaccttggagcagccatggaagaggca
ctgatcttggataataaatacacagaacacagcactgtagggctggcacagcagtgggac
caacttgaccagctagggatgagaatgcaacacaacctggaacagcagatacaagctaga
aacacaactggagtcactgaagaggccctgaaagagttcagcatgatgttcaaacacttc
gacaaggataaatctggtcgactcaatcaccaggagttcaaatcctgcttgcgttctcta
ggctatgacctgcctatggttgaggaaggggaaccagacccagaattcgaatctattctt
gacactgtggatccaaacagggacgggcatgtctcgctgcaggagtacatggcatttatg
atcagccgagaaactgaaaatgttaaatccagcgaggaaatagaaagcgctttccgtgcc
cttagctcggagggcaaaccctatgtgaccaaggaggagctctaccaaaacctgactcgg
gaacaagcagattactgtatctctcacatgaagccctacatggacagcaagggcagagaa
cttccttctgcttatgactacatagaatttacacgttcactctttgtgaattga
DBGET
integrated database retrieval system
