Alligator mississippiensis (American alligator): 102566468
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Entry
102566468 CDS
T03087
Symbol
EFHC1
Name
(RefSeq) EF-hand domain containing 1
KO
K23029
EF-hand domain-containing protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102566468 (EFHC1)
04812 Cytoskeleton proteins [BR:
amj04812
]
102566468 (EFHC1)
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102566468 (EFHC1)
Cilium and associated proteins [BR:
amj03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
102566468 (EFHC1)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
102566468 (EFHC1)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
102566468 (EFHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DM10_dom
EF-hand_7
EF-hand_1
EF-hand_6
DUF5580_M
EF-hand_5
NGP1NT
DMPK_coil
Motif
Other DBs
NCBI-GeneID:
102566468
NCBI-ProteinID:
XP_014455092
UniProt:
A0A151ND28
LinkDB
All DBs
Position
Un
AA seq
640 aa
AA seq
DB search
MSSRPAQGLPLLPGFSFLDPTKTSFHRSQTLGYRNGYAYARRPTVGIGGERLYVNQLSQA
ELDELANKIPTLTYGNAKQAPPSDFVPAHVAFDKKVLKFDAYFQEDVPISAEEHYRIRQV
AIYYFLEDDSMSVMEPIVENSGIPQGKFIKRQRIPKNNCGDHYHWKDLNRGMNITLYGRT
FRIVDCDPFTQVFLESQGIELNPPEKMIFDPYTELRKMPLRKYITPSDFDQLKQFLTYDK
QVLRFYAIWENANSMCDEKRSFIIHYYLADDTVEVREIHEKNDGRDPFPVLMKRQHLPKT
LVDKKKTFPSCVLEISDQEVQEWFTAKDLAVGKSVTLLGRTFFIYDCDKFTQHFYQERFG
LDFQPVHIKQQPPEEVPQIIPPYNGFGFLEDSLQNCFSLLPRPPKKNIIKMLENDHKVLR
YQVTLESPDPIDRKRCFILSYFLSTDMISIYEPPVRNSGIIGGKYLGKTKVPKPGSTVEN
PTYYEPADLTIGATVKVFGHRFVITDADEYVLNYAESNPDVFPAATLQSLRDHFAPRRAA
KQATESELSATGTNRQELEELVMQVQDQMRQHNYLSNGSLREAFLLQDKDGSGFLDKAEF
LALCTRFNLPISDALVNKLISLCLHGEDKISYHDFIRAFS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgcccggcgcaggggctgccgctgctgcccggcttcagcttcctcgacccc
acgaaaacttctttccatcgctcccagactctgggctacagaaatggctatgcctatgca
cgacgccccaccgtagggataggcggggagcgactctatgtgaaccagctgtcgcaggca
gaattggatgagctggccaacaagatacccacactgacctatggcaacgccaagcaggct
ccaccttctgacttcgttccagcccacgtggctttcgacaagaaggtgctgaagttcgat
gcctatttccaggaagatgtccctatatccgcagaagagcattaccggattcgccaagtg
gctatttattacttcctggaagatgacagcatgtctgtcatggagcccatcgtggagaac
tcaggcatccctcaaggcaagttcatcaaacgccagcgaattcccaagaataactgcggg
gaccattatcactggaaggacctgaatcggggcatgaacatcaccctgtacggcaggact
ttccgaatagttgactgcgacccattcacacaggtgttcctggagagccaaggaattgaa
ctgaaccctccggagaagatgattttcgacccttacacagaactccgcaagatgcctctg
cgcaagtacatcacaccgtccgactttgaccagctcaaacagtttctcacctatgacaag
caggtccttcgtttctatgccatatgggagaatgccaacagcatgtgtgatgagaagcgg
tctttcatcatccattactacttggcagacgacacagtggaggttcgggaaatccatgag
aagaatgatggcagggatcccttcccagtgctgatgaaacgccagcacctgcccaaaacc
cttgtggacaagaagaaaaccttccccagctgcgtgctggagatctctgatcaggaggtg
caagagtggttcactgccaaagatttagcagttggcaagtccgtcaccctcctgggacgc
accttcttcatctatgactgcgacaaattcacacaacacttctatcaagagagatttggc
ctggacttccagccagtgcatataaagcagcaaccaccagaggaggtcccacagattatt
cctccctacaacggctttggcttcctggaagactcccttcagaattgcttctccctcctt
ccaagaccccccaagaaaaacatcattaagatgctagagaatgaccacaaagtgctgcgg
taccaggtgacactggagtctccagaccccattgacaggaagcgatgtttcatcctctcc
tatttcctttccacggacatgatcagcatctacgagccgcccgttcgcaattcggggatc
atcggaggcaaataccttgggaagaccaaagtccccaagccaggcagcacggtggagaat
cccacctactacgagccagctgacctcaccatcggggccacagtcaaagtgtttggccac
aggttcgtcatcactgacgccgatgagtacgtcctgaattacgcagagagcaaccccgac
gttttccctgcggcaacactgcagtctctgcgggatcactttgcccctcgccgagcagca
aagcaggctactgagagcgagttgtctgcaacaggaactaacaggcaggagctggaggag
ttagttatgcaggttcaggatcagatgaggcagcataactacctgagcaacggcagcctg
cgggaggccttccttctccaggacaaggatggctccggtttcctggacaaagcagagttc
cttgccctctgcacccgttttaacctgccgatcagcgatgccctggtgaataagctgatc
agcctctgtttgcacggggaggacaaaattagctaccacgatttcatcagagctttctct
tga
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