Alligator mississippiensis (American alligator): 102566504
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Entry
102566504 CDS
T03087
Symbol
SEC16A
Name
(RefSeq) SEC16 homolog A, endoplasmic reticulum export factor
KO
K20353
COPII coat assembly protein SEC16
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102566504 (SEC16A)
Membrane trafficking [BR:
amj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102566504 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
102566504
NCBI-ProteinID:
XP_014459228
LinkDB
All DBs
Position
Un
AA seq
2472 aa
AA seq
DB search
MQPPPQTVPAGAGGPPPVGTARNVYWRNGPFSRRANVPVSAALAPVQPVTDPFAFGRQTP
QGSPLGNPSKGNPPVMPGPPPSVYPQPAVLHKAPSHAGDNPHELHASLPAPVSQPGINSN
TFSNVLASSPGHDLNSTTEMQPNAEFGLHTPSAPLHYSPGMMLENSLGGHVGVGPAPNRP
LSIQDVNRDPSNPSAVPATTPFFPFAETPPSQWRLVQGNTQPQVRNYMPYAEPSSQNAVH
SMSHPSAGGSSLHLAPGHQQSTMQAPLLGGSDKNGQSGSAGGNPQASSLQPENMGRRSVE
MTNTWLAQPYPEQFYPQSLLPDCGLVNPTTQESNLKNQSQAASETSGGHVPSNPDSGTIS
MFFKGDEAENEEILSSEINDLASKADFDACHRSSGLMYHPSLPPQQVVANIQSQAPVSTG
SANERVPKGMDVQYFLRTVSSPHEAQTVKHSVHVTDDNTDVGKARGNVALQYENVENLEC
VQNQEVLPNEPQNNPLSSSVGSDLYRYGLPPGPSLPKNTIVSHAEGGPNLEAPDSLPHPI
RPDSVSSNYSNVSHRSISSSARPQELDGTFIQQESGKPDEETSASFFKQIDCSPSGGDTS
EPNISKNYHRNLSQPPTPSPPKPTGIFQTSANSSFEPVRSHGVGVKPAEIDQAKMVVELR
ENHPDKKNAKKTTALTAASPGNLEQPPDNLETLFIPQAHPLPLLVTAEHGNVLQPVVGPG
VENVQAVSEKRPSTRAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVPAKQTV
EIIQPPEEGLSHQQPDKPGSVTVQPSQDGNVSSENLENPPKMGEEEALQSQASSGYASLL
SSPPTESLQNQPVLIAQPNQSYNLAQPINFSISLSNQLRNENNQLLKDPGVGDKPVAGLQ
TLHAGGIHSGENVSLPVVQAGSLANAPPPTTNLSNANLLQSPSSASEIAPNQSTSLLMQL
PSQIPLNVAPEGQKNANSESLIPELATMPGANSSVPPGTSLPSGNASVLVPPANSMVPSN
NFANHSNSKEEAAGALDFTVTWTLERSNTSNSGQVQNPSLSGGPAYSQQPANHSSQVGLE
THDKQHFYQQVTKDVQHQVPSDRATQGTLPSQQQMQAAPVPQAVPSGHSSVPSNYQVAPG
SKPMQAPQQHDSQVPSNRHYPLGPQEASSTQPPARAAQPSSDKQPLPVPSSSCALTTSAV
ATTTQPVMPATQQEPQCPLPPQTPQDAFGPPQNPYYYYRHPYDAYQQPYPPSYPAVDPRA
AAHLYYSEDVYGQYDPRYRHYDSTAYVESGGYRYAEPERPSSRASHCSDRPPSRQGYKED
YYNTKTGWNDYYADYYANPYDYGDPNRWDPYSSAYDPRYRDPRNYDQRYWYDAEHNLYQK
REPYPYSNRQEQYEDHWRYDPRFTGSFDDESEPRRDPYGDEFDRRSMHSERSSHSLHSSR
SVHSSFSSRSQQSQLYRSNNDLTANVFETTTQPVSLHADYPYGGYATTFDGQQTFTDYGY
SGETGWPTVEQVPSRPMTPEKFSVPHTCARFGPGGHLIKVLPNLPSEGQPALVEIHSMET
MLQHSPEQEEMRAFPGPLAKEDTHKVDVINFAQNKATQCFQNDNLIDKESASLLWEFIVL
LCRQNGTVVGTDIAELLLRDHKTVWLPGKSPNEANLIDFTNEALEQAEEESGEAQISYLT
DSLITAIDSIERETERFRELLLYGRKKDALESAMKRGLWGHALLLASKMDSRTHARVMTR
FANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNMDLESRTIS
TMGDTLASKGLLDAAHFCYMMAQVGFGVYTKKTTKIVLIGSNHSLPFFKFATNEAIQRTE
AYEYAQSLGTQPGSLPNFQVFKFIYACRLAELGLAAQAFHYCEVISKTVLRDPQYYSPVL
INQLVQVSSQLRLFDPQIKEKPEQETFIEPTWLVRLRHLDVQIKEGVIAYSADRSTPQQY
ASSTPSSELDHISQCDGAGGTPDMGPGTENQLLASLLPNMVQPMQSVQLMPSAPHTILDG
SSTMMPPPPQQDPGGTVPFYLVAPTSTGPGPSFAPPGFPHQCGVAQPPLYLSPAVPPGGP
PPLAADAWPEERINQETAMQRLPQESPGRKNFPEQREDDFYGKMASMAPGRRSRSTSQSS
AHMGYGQRSRTTSESSTHSVGRERSNSAVKQPSPPPPSIPEGKETKKDAKKEVASRKSGA
NWFRWLMGKGKNEAHLPDDKNKSIVWDEKKQRWVNLDEPEEESKPPPPPPTGFPKVPQAA
PPGPGGPPGASVNMFSRRAAGSRARYVDVLNPSGAKSSSAVPAPSDLFAPLAPMPIPANL
FVPNSVPEESQPTEGSGAVEQTPATNQANTDAAAAAEPQYLNSAMLPPGSELPASNPDGS
QSGELSRSSSMSSLSREVSQHFNQPLSSVPPSGGPPTGTVQFYNPSHFAHSPAPTGSSRM
GRIGQRKYPTLK
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgcctccacagacagtgccagcgggagctgggggaccgcctcctgtaggaacc
gctcggaatgtgtattggcgaaacggcccattcagcaggcgggcaaacgtgccagtctcg
gcagcacttgccccagtgcaacctgtgacagacccttttgcatttggcagacaaactcca
cagggttctccactaggtaatccatccaaaggcaatccgccggtcatgccaggtcctcct
ccctcagtgtatcctcagccagctgttctgcacaaagctccttctcatgcaggagataat
ccacacgaactgcatgcatctttaccggcacctgtgtctcaaccgggaataaattctaat
accttttctaatgttttggcttcatcgccaggacatgatttaaatagtactacagaaatg
caacccaatgcagaatttggactccataccccttcagcaccactgcattatagtccagga
atgatgcttgaaaattctctcggtggacatgtaggagtagggcctgcaccaaacaggcct
ctaagtatacaagatgtaaatcgagatccaagtaaccctagtgcagtacctgctacgaca
ccattcttcccttttgcagaaacgcccccatctcagtggagactcgttcagggtaacact
cagcctcaagttcgaaattacatgccctacgctgagccatcttctcagaatgctgttcat
agcatgtctcacccttctgctggtggttcaagtttgcatctggctcctggacatcagcaa
agtaccatgcaagctcctttgctgggtggcagtgacaagaatgggcaaagtggctctgca
ggaggtaacccccaagcgagcagccttcagcctgaaaatatgggtagacggtctgtagaa
atgactaatacttggctggctcaaccttaccctgagcagttttacccacagtccctgtta
ccagactgtggtttggtaaaccccaccactcaggaaagtaacctgaaaaaccaatctcaa
gctgcatctgaaacatccggtggacatgttcccagcaatccagattcaggaactatctcc
atgtttttcaaaggggatgaggcagaaaatgaagaaatactttcatcagaaataaatgat
ctggctagtaaagctgactttgatgcttgtcaccgaagttcaggacttatgtatcaccct
tctctccctcctcaacaggtagtagccaatattcagtctcaggcaccagttagtacaggc
tctgctaatgagcgtgtaccaaagggaatggatgtccaatattttctgagaactgtgagc
agcccgcatgaggcccagactgtcaagcattctgtgcatgttacagatgacaacacagac
gttggcaaagctcgtgggaatgttgcgctgcagtatgaaaatgtcgagaacctggagtgc
gttcagaatcaagaagttctgccgaatgaaccacagaataatcctttgtcctcaagtgta
ggatctgatctatacaggtatggattgcccccagggccttcacttccaaagaacactatt
gtgagccatgcagaaggaggaccaaatttggaagcacctgattcgttacctcatcccatc
cgacctgacagcgtatcctcaaactacagcaatgttagccacaggagcatttccagctca
gcgagacctcaggagctcgatggtacgttcattcagcaagaaagcgggaagcctgatgaa
gagacatctgccagtttctttaagcagattgactgctccccttcgggaggagatacaagt
gagcccaatataagcaagaactaccacagaaatctgtcccagcccccaactccaagtccc
cccaagcctacaggaatctttcagacaagtgcaaatagttcctttgaaccggtgaggtcc
catggggttggggtgaagcctgcagagattgaccaggcaaagatggtagttgagctaagg
gagaaccacccagacaaaaagaatgccaagaaaactacagctctgacagctgcctcccca
ggaaatctcgaacagccgccagataatctggaaaccctcttcattccccaagcacacccg
ctgcctcttttagtcacggcagagcatggaaatgtgttgcagcctgtcgttgggcctggc
gtggaaaacgttcaagcggtatctgagaaaaggccctcaacaagagctcagggagcagtt
aagaagtgtgacagtccagcaaccactctgtgggctcataacgaactgcccaactttggg
ggtaatgttcttctggcacctgctgctccagcagtatatgtacctgctaaacagacggtg
gaaattattcagccacctgaagaggggctgtcgcatcagcagccagataaaccaggctct
gtcactgtgcagccttcccaggatggaaatgtatcctctgagaacttggagaatcctccc
aaaatgggagaagaggaagcactccaatctcaggcaagttcaggttatgcaagtttgctg
tcttctccacccacggagtctttgcaaaatcagcctgtcctgattgctcagcccaatcaa
agctataacttggctcagccaattaatttttccatttctctatctaatcagctaaggaat
gaaaataatcagttgctgaaagatcctggagttggagataagcctgttgcaggcctccaa
actctgcatgctggtgggatccactccggggaaaatgtgtcattgcctgtggtacaagct
ggatctttagctaatgcacctccacctactactaatctgtcaaatgctaatttattacaa
agtcctagtagcgcttctgaaattgcacctaatcagtccacaagtctattgatgcaactt
ccatctcagataccacttaatgtagctccagaaggtcaaaagaatgccaattcggaaagt
cttattccagaattggctactatgccaggggctaattcatcagtgccccctgggacaagt
ctccctagtggaaatgcaagtgtgttagtcccaccagcgaattccatggtaccttctaat
aattttgcaaatcactcaaatagtaaagaagaagctgctggagcacttgactttacagtt
acgtggacactggagagaagtaatacaagtaattcaggacaggtgcaaaacccgtctctg
tctggtggtccagcatattctcaacaaccagccaatcacagtagccaggtggggctagag
acgcatgacaaacaacatttttatcaacaggttacgaaagatgtgcagcatcaggttcca
tcggacagagccacgcaaggcacattgccttcgcaacagcaaatgcaagctgctccagtg
ccacaagcagtaccttctgggcactcttctgttccttcaaattaccaggtggctccaggg
agtaaacccatgcaagcaccacagcagcatgacagtcaggtaccgagtaataggcactat
cctctgggtccccaagaggcaagttcaacacagccaccagccagggctgctcagccaagc
tctgataaacaaccattgcctgttccatcatcatcatgtgctttgaccacatcagcagtt
gctactaccacccagccagtcatgccagccacacagcaagagccacagtgtccattgcca
ccacagactcctcaggatgcctttggtccaccacaaaacccttactactattacagacat
ccttatgatgcttatcagcagccatatccaccatcttaccccgctgtggatcctagagca
gcagctcacctttattattcggaggatgtctatggacaatatgacccccgctacagacac
tatgatagtactgcttatgtggagtctgggggctatcggtatgcagagcctgagcgtccc
agttctagagctagtcactgctctgatcgacctccttctaggcagggatataaagaagat
tattataatacaaagaccggatggaatgattactatgcagactattatgcaaacccatat
gattatggagatccaaatcgctgggacccttattcatcagcctatgatcccagatacaga
gatcccaggaattatgaccaaagatattggtatgatgctgaacacaacctataccagaag
agagaaccgtatccatacagtaataggcaagaacagtatgaagatcattggcgatatgat
cctcgctttactgggagttttgatgatgaaagtgaacctcgtagggacccttacggtgac
gaatttgacaggcgcagcatgcacagtgagcgttcttcccacagcttgcacagttcccgc
agcgttcacagcagcttcagctctcgctctcagcaaagccagctttatagaagcaacaat
gatctgacagctaatgtgttcgaaactaccacccagccagtctcactccacgcagattat
ccatatggaggatatgctactacttttgatggtcaacagacttttacagattatggctac
tcgggtgaaactggatggccaactgtagaacaagtcccatctagacctatgacacctgag
aaattttcagtgcctcatacctgtgcgaggtttggtcctgggggtcatctaataaaagtg
ttgccaaacctgccttcagaaggacaaccagctttggttgaaatacacagcatggagaca
atgttgcaacattctccagaacaagaagagatgagagcatttcctggccctcttgctaaa
gaggacacccataaagtggatgtcattaattttgcacaaaacaaagccacacagtgtttt
cagaatgataatctaattgacaaagagtctgcaagtctgctttgggagtttattgtactg
ctgtgcagacagaatgggactgtagtaggaacagacattgcagagcttttgctacgcgat
cataaaactgtgtggcttcctgggaaatcgcccaatgaagcaaacttgattgacttcact
aatgaggctttggagcaagcggaagaagaatctggtgaagctcaaatctcatatctcact
gatagtcttataacagcaattgacagtattgaaagagagacggagagattcagggagctg
ctgctttatggtcgtaagaaggatgcattggagtctgccatgaagcgtggtttatgggga
catgctctgctacttgccagtaaaatggacagtagaacacatgcaagagtcatgaccaga
tttgccaacagtctcccaattaatgatcctctgcagactgtttaccagctcatgtctgga
agaatgccagctgcatccacatgctgtggtgatgagaagtggggagactggaggcctcat
cttgccatggtactatccaatttgaccaataacatggatttggaatcgaggactatcagc
acgatgggtgatactctggcttccaaaggcctgttagatgctgcacatttttgttacatg
atggcccaggttggatttggagtttatacaaagaaaacaacaaagattgtcctaattgga
tcaaatcatagcttgccatttttcaagtttgccaccaatgaagccattcagagaacagaa
gcctatgaatatgcacagtcgcttggtacccagcctggcagcttacccaatttccaggtt
ttcaaattcatctatgcttgtcgactagctgagttgggacttgctgcacaagctttccat
tattgtgaagtgatttccaaaactgttcttagagatccccagtactattcacctgtgctt
atcaaccagcttgttcaggtatcgtcacagttgcgcctgtttgaccctcagatcaaggag
aaaccagagcaggaaacatttattgaacctacttggttagtacgacttcgacacttggac
gtacagatcaaggagggtgtaatagcttacagtgcagatagatccacccctcagcaatat
gcctctagcacaccaagctctgagttagaccatatcagccaatgtgatggagcaggaggt
acaccagacatgggtcctggtactgaaaaccaactgctagcatccttgttaccgaatatg
gtccagcccatgcaaagtgtgcagctgatgccttcagcgcctcacacaattcttgatgga
tcgtctacaatgatgcctcctcctccacagcaagaccctggtggtactgttcctttctat
cttgtggcccccacttcaactggtccagggcctagttttgcacctccaggctttccacat
caatgcggagtggcacagccacccctctacctgagccctgcagtgccaccaggagggcca
ccacctctagcagctgatgcctggccagaagaacggataaaccaagaaacagcaatgcag
aggcttccccaggaatctccaggtcgaaagaatttcccggagcaaagagaggatgatttc
tatggcaaaatggctagcatggcaccaggacgaagatccagatctacctcccagtcttca
gcacacatgggctacgggcagagatcacgaaccacttccgagtcctccacccattcagta
ggacgagagagatctaattcagcggtaaagcagccctctcctcctcccccatccattcct
gaagggaaggagaccaagaaagacgccaagaaggaggtggcatctagaaagagtggtgca
aattggtttcgatggctgatgggaaaaggaaagaatgaagctcaccttccagacgataag
aacaaatcaatcgtttgggatgaaaagaagcagcgctgggtcaatttagatgagccagaa
gaagagagcaagccaccacctccacctccaacagggtttcctaaagttccccaggcagct
ccacctggacctgggggtccacctggtgcctcagtcaacatgttctccagaagagcagca
ggaagcagagctcgttatgtggatgttctaaatccaagtggagcaaaatcaagcagtgct
gttcctgccccgtcagacctgtttgccccgttggcacccatgcctatccctgcaaacctg
ttcgtaccaaactcagttccagaggaatcccagcctacagaagggagtggggcagtcgag
cagacaccagctacaaatcaagccaacaccgatgctgctgcagctgcagaaccacagtat
ttaaattctgccatgcttcctcctggttctgaactccctgcatccaatccagacggctcc
cagtcaggcgagctttcgcgctctagttcaatgagttcattatcacgtgaagtaagccag
cattttaatcagcctctcagtagcgtaccaccgtcagggggacctcccaccggcactgtt
cagttctacaacccttctcattttgcacactctcctgcacccactggaagttcaaggatg
ggaagaattggacagagaaaatacccaacgttgaaatag
DBGET
integrated database retrieval system
