Alligator mississippiensis (American alligator): 102566554
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Entry
102566554 CDS
T03087
Symbol
UBE4B
Name
(RefSeq) ubiquitination factor E4B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04120
Ubiquitin mediated proteolysis
amj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102566554 (UBE4B)
04120 Ubiquitin mediated proteolysis
102566554 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102566554 (UBE4B)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102566554 (UBE4B)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
U-box type E3
102566554 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
102566554
NCBI-ProteinID:
XP_006271438
UniProt:
A0A151N3U0
LinkDB
All DBs
Position
Un
AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRENPPGPPVAAPAPGPSHNLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPPSGSEVSEEQALQLVSKIFRVSWKDRDRDVIFL
TSLSVQFKQNPKEVYSDFKDLIGQILMEVLMMSTQSRDENPFASLTATSQPIAAAARSPD
RNLILNAGSNPGTSPMFCSVGSFGSGSLSSVGGSGSTSVSDSCSDHFTIETCKETEMLNY
LIECFDRVGIEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLHGSLTQPRLLQQQSLLV
PYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLALASKECSLDSDNFKYPLMALG
ELCEIKFGKTHPMCSLVVSLPLWLPKSLSPGAGRELQRLSYLGAFFSLSVFAEDDTKVVE
KYFSGPAITLENNRVVSQSLQHYLELARLELFKILHNILLNGETREAALSYMAAVVNANM
KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRIILPTDETRVKA
TMEDVTAWMAELYRDPSQFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGM
VIQLMLRILDPAYPNMKLPLNLDVPKVFAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLIAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDP
FNRQTLTENMLEPVPELKEQIQAWMRDKQNADH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggatgagattcgtcgaaggcgccttgctcggcttgcaggtggg
ccatcttcccagcccaccactccgcttacatccccacaaagagagaacccaccaggacca
cctgtagcagcgccagccccgggtccatcccacaatcttggtctaaatgtccatagcatg
accccagctacctctccaattggcgcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttcactcagcagttctccatccaatagccttgaaacgcaatcccagtctctt
tcccggtcccagagcatggatattgatagtgtctcctgtgagaaaagtatgtcccaggtg
gacgtagattcaggaattgaaaatatggaggtcgatgagaatgatcgcagagagaaaagg
agcctgactgataaggagcctccgtcaggatctgaggtatcggaggagcaggcgttacaa
ctggtctctaagatattcagagtttcctggaaggatcgagacagagatgtaattttcctt
acttcgctctctgtgcaatttaagcagaacccaaaagaagtgtactcagattttaaggac
ttgattggtcagattttaatggaagttctgatgatgtccactcagtcaagagatgaaaac
ccatttgccagcctgacagctacatcacagccaattgcagcagctgcccggtcacctgat
agaaacctgattctaaacgctggctccaacccaggaactagccctatgttctgtagtgtg
ggttcctttggttctggttccttatccagtgtgggaggctctggcagcacaagtgtttct
gattcctgcagtgaccatttcaccattgaaacttgcaaggagacagagatgctgaactac
ctcattgagtgttttgacagagttggaatagaggagagaaaagcaccaaagatgtgtagc
cagccagcggttagtcagttactgagcaacatccgatcacagtgcatttcccatgctgct
ttggtactacacggttccttaacacaaccaaggttattgcagcagcagtctctgttggta
ccatacatgctgtgtaggaacctcccgtttggcttcatccaagaattggtgagaacaacc
taccaggatgaagaggtgttcaaacagatttttatccccatcttacaaggtctggctctt
gcttccaaagagtgctcccttgatagtgacaattttaaataccctcttatggcattaggt
gaactgtgtgaaatcaagtttgggaaaacacaccccatgtgcagcttggttgtatctttg
cccttgtggttgcctaaatctttaagcccgggtgcaggacgtgagctgcaaagactttca
taccttggcgctttcttcagtctctctgtctttgctgaagatgatactaaagtggttgaa
aagtatttctcagggcctgccattactcttgaaaacaaccgtgttgttagccaatctttg
cagcattacctggaattggcaaggctagaactgttcaagattctacataatattttgctg
aatggggaaactcgggaggcagctcttagttacatggcagctgttgtcaatgccaacatg
aagaaggcacagatgcagacagatgatcggttggtgtccacagatggttttatgctcaat
ttcctatgggttctgcagcagctaagcacaaaaattaagctagaaacagttgatcccaca
tatatattccatccgaggtgtcgcattatcctcccaacggatgagaccagagtgaaagca
accatggaggatgttacagcctggatggctgagctttacagggatccgtctcaattttct
gagccgaaattcccaacggaatgcttctttctaaccctgcatgcccaccacctctccatc
ctgccaagctgccgccgctacatccgtagactgcgggccatcagggaactcaacaggact
gtcgaggatctgaaaaacaatgagagtcaatggaaagattctcctctggctaccagacat
cgagagatgctgaaacgctgtaaaacacagcttaagaagctggtgcgttgcaaggcgtgt
gcagatgctggcttgctagatgagaactttttgaggagatgtctgaatttttatggcatg
gtgattcagctgatgcttcgcatcctcgaccctgcttaccccaacatgaagctgccttta
aatcttgatgttccgaaggtgtttgcagcactgccggagttctacgtggaagatgtggct
gaatttttattttttattgttcaatatgctcctcaggtgctttatgagccctgcactcag
gacattgtgatgttccttgttgtgatgctgtgcaaccagaactacatccgaaacccctat
ctgattgctaagctggtggaggtgatgttcatgacaaaccctgccgttcagccacggacg
caaaagttctttgaaatgattgagaatcatcctctctccactaaattgttagtcccgtca
ttgatgaagttttatacagatgttgagcacactggagccaccagcgagttctatgacaaa
tttaccatccgctaccacatcagtaccattttcaaaagcctctggcagaacatagctcac
catggcaccttcatggaagagttcaactctgggaagcagtttgttcgctacatcaatatg
ctgataaatgacacaacatttttgctggatgagagtctggagtccctaaagcgtattcat
gaagtccaagaggagatgaagaacaaggaacagtgggacctgctgccaagggaccagcaa
caggctcgtcagtctcagcttgctcaggatgagcgtgtgtctcgctcatatcttgccctg
gcaacagaaactgttgatatgttccatatccttaccaagcaggttcagaagcctttcctc
agacctgaacttggaccacgattggctgctatgctgaactttaaccttcagcaactgtgt
ggccctaagtgccgtgacctgaaagttgaaaaccctgagaaatatgggtttgaaccaaag
aagctgttggaccaactgactgatatttacctgcagctagattgtgctcgttttgctaaa
gcaattgctgatgaccagaggtcctacagcaaagagctgtttgaggaggttatctcgaag
atgaggaaggctggcatcaagtcaacaatagcaatagagaaattcaagctgctggcagag
aaggtggaggaaattgttgccaagaatgcccgtgcggaaatcgattatagtgatgctcca
gatgaatttagagatccactcatggacaccctgatgactgaccctgtaaggctgccatct
ggaactatcatggacagatcaataatcctgcggcaccttttgaactcctccactgacccc
ttcaatcggcagacgctgacagaaaacatgctggaaccagtgccagaactgaaagagcaa
atccaagcctggatgagagacaagcagaatgctgaccattaa
DBGET
integrated database retrieval system
